| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327345
Identifier: 116327345
GI number: 116327345
Start: 594272
End: 595306
Strand: Direct
Name: 116327345
Synonym: LBL_0541
Alternate gene names: NA
Gene position: 594272-595306 (Clockwise)
Preceding gene: 116327344
Following gene: 116327346
Centisome position: 16.44
GC content: 41.35
Gene sequence:
>1035_bases ATGTCAGAAATTCAAAATTGGGATGAGGACGACTTTCCGATTCCCATAAAAGAGGTAGGAAAGGCCGAATCCAGGCTTTC CGCCCTACTGTTCAATTTGTTAAGTCGTCATTCTCCTATGAATTTTACGAAAATTCGTTCTTTGCTTCCGGACCATTATC AGAATTTGGAAAACCCGGATTCAGACCGGAAAAAACTTTCCAGAGATATGGAGGAGTTGGGGGAACTCGGCTTTTTGGTT CGTTCCACACAGGAGGGTTACGCTCTCGATCGAAACATATCCAATCGTGAATTGCGATTGGATAAGGAGGAATTGCGGGT GCTCGCAGAAGCGATTCTTAGATCGTATCAAGAAACTCCTTCTTTGCAGCTGTATTCTTTGTCTCAAAAGTTGTTTGAGG GAAAACTGGACGTTTATCCCGAATTGGAAATGGATCTAAAAACTCAAAAGTCGTTGGGTCAAGTGGACGAGTCGGAGGAG CTTTTGAAAAAACTTTTAGAGGCATTGAAAACGAAATCCCCCGTTCAATTTTTATATTATAAAACCTTTCCGGAAGAAAC CTATCGGGTGGAAGTTGATCCGATTCGATTGATTCGAAAAAATTCGGAGGACTATTATCTTCTCGCCTACGACAGAAAGA AAAAAGAAAGAAGGAGATTCGTTATTCCTAAAATCACGAGAGTGGAAACGATTGCTGAAAATCCTCTTTATCAACCTCAA GGGCAGAAAAGGGAAAACTCACGAGATTGGGTTTTGCACCCCGCTCTATTTCAGGTACATGACCCGATCGAAGTCGAATT AATTTGCGATCCGGAATCCTCATACAAAGTTCGAAATTCAATATCGGAAATTTCTTATGAAGAATTTTCCAGAGATTCGT TTCGGCTTAAGGTCACGAATAGGGAAGGACTTTTCCCGCTATTGATCGAAGCGAGAGATTCGATCAGGGAAATTCTTCCG GTGTTTGTTGCTTCGGATTTCAGGAAGTATATGGAACAAATTGTAATTAACTACCGATCCTTGCTAAAAGGCTAA
Upstream 100 bases:
>100_bases TTGGATAAAATCTATAATGAGGAGATTTTGAGGGAAGAACGAATAGATTCAAGTGGTTTTCGAGTTGATTAGAATTTCGA GTTTTGGAAAGTTTCTAGCT
Downstream 100 bases:
>100_bases AGATAATCTTGGGAAGATTGGTGGTCGATTTATTACTTTTTAATTTTATAATATAATCGAATTCATCTAAAAATTTGATT TTAGAACCTGCTCTTTGGAT
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSEIQNWDEDDFPIPIKEVGKAESRLSALLFNLLSRHSPMNFTKIRSLLPDHYQNLENPDSDRKKLSRDMEELGELGFLV RSTQEGYALDRNISNRELRLDKEELRVLAEAILRSYQETPSLQLYSLSQKLFEGKLDVYPELEMDLKTQKSLGQVDESEE LLKKLLEALKTKSPVQFLYYKTFPEETYRVEVDPIRLIRKNSEDYYLLAYDRKKKERRRFVIPKITRVETIAENPLYQPQ GQKRENSRDWVLHPALFQVHDPIEVELICDPESSYKVRNSISEISYEEFSRDSFRLKVTNREGLFPLLIEARDSIREILP VFVASDFRKYMEQIVINYRSLLKG
Sequences:
>Translated_344_residues MSEIQNWDEDDFPIPIKEVGKAESRLSALLFNLLSRHSPMNFTKIRSLLPDHYQNLENPDSDRKKLSRDMEELGELGFLV RSTQEGYALDRNISNRELRLDKEELRVLAEAILRSYQETPSLQLYSLSQKLFEGKLDVYPELEMDLKTQKSLGQVDESEE LLKKLLEALKTKSPVQFLYYKTFPEETYRVEVDPIRLIRKNSEDYYLLAYDRKKKERRRFVIPKITRVETIAENPLYQPQ GQKRENSRDWVLHPALFQVHDPIEVELICDPESSYKVRNSISEISYEEFSRDSFRLKVTNREGLFPLLIEARDSIREILP VFVASDFRKYMEQIVINYRSLLKG >Mature_343_residues SEIQNWDEDDFPIPIKEVGKAESRLSALLFNLLSRHSPMNFTKIRSLLPDHYQNLENPDSDRKKLSRDMEELGELGFLVR STQEGYALDRNISNRELRLDKEELRVLAEAILRSYQETPSLQLYSLSQKLFEGKLDVYPELEMDLKTQKSLGQVDESEEL LKKLLEALKTKSPVQFLYYKTFPEETYRVEVDPIRLIRKNSEDYYLLAYDRKKKERRRFVIPKITRVETIAENPLYQPQG QKRENSRDWVLHPALFQVHDPIEVELICDPESSYKVRNSISEISYEEFSRDSFRLKVTNREGLFPLLIEARDSIREILPV FVASDFRKYMEQIVINYRSLLKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40666; Mature: 40535
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIQNWDEDDFPIPIKEVGKAESRLSALLFNLLSRHSPMNFTKIRSLLPDHYQNLENPD CCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCCC SDRKKLSRDMEELGELGFLVRSTQEGYALDRNISNRELRLDKEELRVLAEAILRSYQETP HHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEECCHHHHHHHHHHHHHHHHCCC SLQLYSLSQKLFEGKLDVYPELEMDLKTQKSLGQVDESEELLKKLLEALKTKSPVQFLYY CEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEE KTFPEETYRVEVDPIRLIRKNSEDYYLLAYDRKKKERRRFVIPKITRVETIAENPLYQPQ EECCCCCEEEEECHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHCCCCCCCC GQKRENSRDWVLHPALFQVHDPIEVELICDPESSYKVRNSISEISYEEFSRDSFRLKVTN CCCCCCCCCEEECHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC REGLFPLLIEARDSIREILPVFVASDFRKYMEQIVINYRSLLKG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEIQNWDEDDFPIPIKEVGKAESRLSALLFNLLSRHSPMNFTKIRSLLPDHYQNLENPD CCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCCC SDRKKLSRDMEELGELGFLVRSTQEGYALDRNISNRELRLDKEELRVLAEAILRSYQETP HHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEECCHHHHHHHHHHHHHHHHCCC SLQLYSLSQKLFEGKLDVYPELEMDLKTQKSLGQVDESEELLKKLLEALKTKSPVQFLYY CEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEE KTFPEETYRVEVDPIRLIRKNSEDYYLLAYDRKKKERRRFVIPKITRVETIAENPLYQPQ EECCCCCEEEEECHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHCCCCCCCC GQKRENSRDWVLHPALFQVHDPIEVELICDPESSYKVRNSISEISYEEFSRDSFRLKVTN CCCCCCCCCEEECHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC REGLFPLLIEARDSIREILPVFVASDFRKYMEQIVINYRSLLKG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA