| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327344
Identifier: 116327344
GI number: 116327344
Start: 592870
End: 593400
Strand: Direct
Name: 116327344
Synonym: LBL_0540
Alternate gene names: NA
Gene position: 592870-593400 (Clockwise)
Preceding gene: 116327343
Following gene: 116327345
Centisome position: 16.4
GC content: 39.17
Gene sequence:
>531_bases ATGGACATTCTTTTGTTGGATGATGCTCAAAAAATTGAATCTACTTTGGTAGAAGGCTGGGTTGGAACGGATTCTCTTTT GGTTCCAGATGTTTATTGGAATCGTTTGAATGCTCAAGAAAAAAAAGCCCTTCGGGGCAAACTTCCCTTGTTATTGAGAA AATATTCTAAACAGATCGCTTCTATGAAACGTCTGCATAATCGGGCGGGTAAAATCAAATACAATCGGAACGTCGGCAAA ATGAAAAAGTTTAGTATTCGAGTTCATACCGGTGTTTGGGCTACCTTGAGTGTCTTAGCGGCGGCCCATGGCGTTTCGAG GTGTTATCTTTTTAATTACATGCTCTGGCTGGAGGAACTTGGTGGGAGGGAAGATTTTTTTGTGAAAAGTTTCAATCGGG GAGTTCCTAGCTTTCACTGGACTTACAAAATGACTTGGAAGATTGACAGGAGACAAAATCTCATTTCGAGAGAATTACAA TTTGAACCAAACCCAATGACAAACAAATATCCATATTATGTAAAAGAATAA
Upstream 100 bases:
>100_bases ACTTTTTCTTAGATCTAATCCTCATTAGATTATTTTGTTTCCTTTCATTTTTTTTCTATAAATTGTTCCGCTTGGATTGT TTGAAGAACCGTTTTCTGGT
Downstream 100 bases:
>100_bases AAACCAACCAGATCAAATATCAAAAAACTCTAATCCACCTACCGCCGCCGAAGGAAGAATCTACAGAAATTTCAGTCCAC TCTAGCGGAATTTCATCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDILLLDDAQKIESTLVEGWVGTDSLLVPDVYWNRLNAQEKKALRGKLPLLLRKYSKQIASMKRLHNRAGKIKYNRNVGK MKKFSIRVHTGVWATLSVLAAAHGVSRCYLFNYMLWLEELGGREDFFVKSFNRGVPSFHWTYKMTWKIDRRQNLISRELQ FEPNPMTNKYPYYVKE
Sequences:
>Translated_176_residues MDILLLDDAQKIESTLVEGWVGTDSLLVPDVYWNRLNAQEKKALRGKLPLLLRKYSKQIASMKRLHNRAGKIKYNRNVGK MKKFSIRVHTGVWATLSVLAAAHGVSRCYLFNYMLWLEELGGREDFFVKSFNRGVPSFHWTYKMTWKIDRRQNLISRELQ FEPNPMTNKYPYYVKE >Mature_176_residues MDILLLDDAQKIESTLVEGWVGTDSLLVPDVYWNRLNAQEKKALRGKLPLLLRKYSKQIASMKRLHNRAGKIKYNRNVGK MKKFSIRVHTGVWATLSVLAAAHGVSRCYLFNYMLWLEELGGREDFFVKSFNRGVPSFHWTYKMTWKIDRRQNLISRELQ FEPNPMTNKYPYYVKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20761; Mature: 20761
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILLLDDAQKIESTLVEGWVGTDSLLVPDVYWNRLNAQEKKALRGKLPLLLRKYSKQIA CEEEEECCHHHHHHHHHHCCCCCCCEECCHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHH SMKRLHNRAGKIKYNRNVGKMKKFSIRVHTGVWATLSVLAAAHGVSRCYLFNYMLWLEEL HHHHHHHHCCCEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGREDFFVKSFNRGVPSFHWTYKMTWKIDRRQNLISRELQFEPNPMTNKYPYYVKE CCCCHHHHHHHCCCCCCEEEEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEECC >Mature Secondary Structure MDILLLDDAQKIESTLVEGWVGTDSLLVPDVYWNRLNAQEKKALRGKLPLLLRKYSKQIA CEEEEECCHHHHHHHHHHCCCCCCCEECCHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHH SMKRLHNRAGKIKYNRNVGKMKKFSIRVHTGVWATLSVLAAAHGVSRCYLFNYMLWLEEL HHHHHHHHCCCEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGREDFFVKSFNRGVPSFHWTYKMTWKIDRRQNLISRELQFEPNPMTNKYPYYVKE CCCCHHHHHHHCCCCCCEEEEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA