| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327336
Identifier: 116327336
GI number: 116327336
Start: 583578
End: 584057
Strand: Direct
Name: 116327336
Synonym: LBL_0531
Alternate gene names: NA
Gene position: 583578-584057 (Clockwise)
Preceding gene: 116327335
Following gene: 116327342
Centisome position: 16.15
GC content: 37.5
Gene sequence:
>480_bases TTGACAAAAAAACGAGAGGAGAGCCGATCTTTTAAAATAAAGGACTATAGAATTATCATGAAACTGAATTTGTATACAAA ACCTGCAGTCGCCTATCATCCAGAAATCCAAAGTTATAGAATTCAGCGTTATGCTCTTATACTTTCTCAACTCGGTATTT TGCCGCTCTTCCACGTTCGTCCGTTAAGTTCCATCCAAGCCTTGCGAACCTTAATGAACGGAGTGATTAAGGGTCGGATT TTTATATTTTCTTTTTTATTGAGTGTGGTTCTTTCTTCAAATTTGGTAGCTCAAGAAGAAAGCCAAAATGTAAAGGAAAA AATGGTCTGTCAGAAAATCGAACTCATTATAAACGGACAAAATTACGACGACGGATATAAATGTACAACTCCAGGAGCGA TTTGTTATTTGGTGGAAGGACTTTCTATGAGTTGTTTTGCAAATCCGAGTCCCGACACGAATCAGCCGAAAGCGAATTAA
Upstream 100 bases:
>100_bases AAATTGGGTCTGGATTGGAATTTTTTTACTGCCGATATTATCATTGGGCTATCTGTGGATTCGGAATATTCGTGGAGATA AAAAGGTCTGAATTCAATAG
Downstream 100 bases:
>100_bases AGAATCCGTTTTTAAAAAACTAGAAATTTATCCCAAAAACATCGGGAGGATTGATTGATCGGCACTTTGAGTAAAGATAA AGTATTTTGAGACGGCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTKKREESRSFKIKDYRIIMKLNLYTKPAVAYHPEIQSYRIQRYALILSQLGILPLFHVRPLSSIQALRTLMNGVIKGRI FIFSFLLSVVLSSNLVAQEESQNVKEKMVCQKIELIINGQNYDDGYKCTTPGAICYLVEGLSMSCFANPSPDTNQPKAN
Sequences:
>Translated_159_residues MTKKREESRSFKIKDYRIIMKLNLYTKPAVAYHPEIQSYRIQRYALILSQLGILPLFHVRPLSSIQALRTLMNGVIKGRI FIFSFLLSVVLSSNLVAQEESQNVKEKMVCQKIELIINGQNYDDGYKCTTPGAICYLVEGLSMSCFANPSPDTNQPKAN >Mature_158_residues TKKREESRSFKIKDYRIIMKLNLYTKPAVAYHPEIQSYRIQRYALILSQLGILPLFHVRPLSSIQALRTLMNGVIKGRIF IFSFLLSVVLSSNLVAQEESQNVKEKMVCQKIELIINGQNYDDGYKCTTPGAICYLVEGLSMSCFANPSPDTNQPKAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18094; Mature: 17963
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKREESRSFKIKDYRIIMKLNLYTKPAVAYHPEIQSYRIQRYALILSQLGILPLFHVR CCCCCCCCCCEEEEEEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHCC PLSSIQALRTLMNGVIKGRIFIFSFLLSVVLSSNLVAQEESQNVKEKMVCQKIELIINGQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCC NYDDGYKCTTPGAICYLVEGLSMSCFANPSPDTNQPKAN CCCCCEEECCCCCEEHHHHCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure TKKREESRSFKIKDYRIIMKLNLYTKPAVAYHPEIQSYRIQRYALILSQLGILPLFHVR CCCCCCCCCEEEEEEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHCC PLSSIQALRTLMNGVIKGRIFIFSFLLSVVLSSNLVAQEESQNVKEKMVCQKIELIINGQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCC NYDDGYKCTTPGAICYLVEGLSMSCFANPSPDTNQPKAN CCCCCEEECCCCCEEHHHHCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA