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The map label for this gene is tdcF

Identifier: 116327342

GI number: 116327342

Start: 591538

End: 592005

Strand: Direct

Name: tdcF

Synonym: LBL_0538

Alternate gene names: NA

Gene position: 591538-592005 (Clockwise)

Preceding gene: 116327336

Following gene: 116327343

Centisome position: 16.37

GC content: 50.21

Gene sequence:

>468_bases
ATGAGCGTCCAAAGTAAAATCGAATCCTTGGGTTACAAACTCCCGCCTGCTCCTCAAGCGATTGCAGCTTATATTCCCGC
CAATCGATCCGGAAATCTCGTTTTCACTTCCGGTCAACTCCCACTGAAAGACGGTCGGCTGACGCTCACCGGAAAATTGG
GTGAACCCCTTTCCGTGGATGACGTAAAAGAGGCTACCATTCAGGCCAGTTTGAATGCGATTGCGGCCGCTTCTGCGGTT
TGTGGCGGTCTGGATAAAATCGTAAAAATCGTAAAAATTGGAGTTTTTGTAGCCTGCAGTCCGAATTTTTCGGAGCACCA
TTTGGTTGCGAACCACGGAAGTAACTTTTTCCTTTCCGTGTTCGGGGAGGCGGGACGTCATGCGCGCTTTGCTGTCGGGG
TTCCTTCTCTTCCTTTAAACGCGCCTGTGGAAGTAGAAGCCATCTTTCAGGTTGCAGATGCTCCGTAA

Upstream 100 bases:

>100_bases
CGAAGGGGAAAAGAAAGAAAATTCCTTTTTTCGAAACTGCTTGAAAAATCGAGGACGGCAATCTTTTTGGAAGGATCTTT
CATTATTCTTAAGAGACAAC

Downstream 100 bases:

>100_bases
CCTTTGGAGAGATATTCAATGGAGCTTTCGTTCGATTCCGCTTCTTTTAAAGGAATGGATTTCGTTTTATCTTTCTTTTA
CTGAAAGGTTTACGGAGTTC

Product: translation initiation inhibitor

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Endoribonuclease; Translation Initiation Inhibitor Protein; Transcriptional Regulator; Endoribonuclease Family Protein; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Endoribonuclease L-PSP Family; YjgF-Family Protein; Peptidase C; Translation Initiation Inhibitor YjgF; L-PSP Family Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSVQSKIESLGYKLPPAPQAIAAYIPANRSGNLVFTSGQLPLKDGRLTLTGKLGEPLSVDDVKEATIQASLNAIAAASAV
CGGLDKIVKIVKIGVFVACSPNFSEHHLVANHGSNFFLSVFGEAGRHARFAVGVPSLPLNAPVEVEAIFQVADAP

Sequences:

>Translated_155_residues
MSVQSKIESLGYKLPPAPQAIAAYIPANRSGNLVFTSGQLPLKDGRLTLTGKLGEPLSVDDVKEATIQASLNAIAAASAV
CGGLDKIVKIVKIGVFVACSPNFSEHHLVANHGSNFFLSVFGEAGRHARFAVGVPSLPLNAPVEVEAIFQVADAP
>Mature_154_residues
SVQSKIESLGYKLPPAPQAIAAYIPANRSGNLVFTSGQLPLKDGRLTLTGKLGEPLSVDDVKEATIQASLNAIAAASAVC
GGLDKIVKIVKIGVFVACSPNFSEHHLVANHGSNFFLSVFGEAGRHARFAVGVPSLPLNAPVEVEAIFQVADAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16118; Mature: 15987

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQSKIESLGYKLPPAPQAIAAYIPANRSGNLVFTSGQLPLKDGRLTLTGKLGEPLSVD
CCHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEECCCCEECCCEEEEEECCCCCCCCC
DVKEATIQASLNAIAAASAVCGGLDKIVKIVKIGVFVACSPNFSEHHLVANHGSNFFLSV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCCCCEEEEECCCCEEEEE
FGEAGRHARFAVGVPSLPLNAPVEVEAIFQVADAP
ECCCCCCEEEEECCCCCCCCCCEEHEEEEEECCCC
>Mature Secondary Structure 
SVQSKIESLGYKLPPAPQAIAAYIPANRSGNLVFTSGQLPLKDGRLTLTGKLGEPLSVD
CHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEECCCCEECCCEEEEEECCCCCCCCC
DVKEATIQASLNAIAAASAVCGGLDKIVKIVKIGVFVACSPNFSEHHLVANHGSNFFLSV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCCCCEEEEECCCCEEEEE
FGEAGRHARFAVGVPSLPLNAPVEVEAIFQVADAP
ECCCCCCEEEEECCCCCCCCCCEEHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA