Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
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Accession | NC_008378 |
Length | 870,021 |
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The map label for this gene is 116249160
Identifier: 116249160
GI number: 116249160
Start: 539348
End: 539713
Strand: Reverse
Name: 116249160
Synonym: pRL120496
Alternate gene names: NA
Gene position: 539713-539348 (Counterclockwise)
Preceding gene: 116249161
Following gene: 116249158
Centisome position: 62.03
GC content: 62.84
Gene sequence:
>366_bases ATGGCCCCTCCCTGTGAAAGCGAGAGGCACCGTCGTTACGCGAACTTCCGGTTAACTCGCGTCGAGAAGGCGTCGGTGCG CGACGTCCGCGATGAGCGCCAAATCGAGCCGTACGTCATACTCGTGGTCTACGACTGCTCCGGGCCGATCCCGGACCTTC GCACCGAGGCCTCGCATGTCCGCTCTCGTGCCAGGTGCCCTCGCAGCGGACGGTGCGCCGTCGGCCCCAAATCGGTCATT CCTTCAAGCCGGGGCAACGACTGCTTCCGGCGCATCGCAGTCCTACGCGGCTTACGATTCCGGCAGCATGATTGTGTGAC CCGAGATTGGCAAGCCATTGCTTTGACCAATGAGCCCCGAACCTAA
Upstream 100 bases:
>100_bases ACTGCAATTGTTCAACCGCCGCCCTTTCGTGACGGCAATCCGCTGCAAAAGCCCGTTCGTCCATCGACCTACGGGCTCTT GGCTTGGAAATTGATCACCC
Downstream 100 bases:
>100_bases GGCCAATCCGCATAACCCGAGGACAGCATGCTGTTTTCCGAGCCGGCCGAGGCGCGGGCGACCTCGCGGTAGCCGGCGGG TGAAAGGCCGGTCTTGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MAPPCESERHRRYANFRLTRVEKASVRDVRDERQIEPYVILVVYDCSGPIPDLRTEASHVRSRARCPRSGRCAVGPKSVI PSSRGNDCFRRIAVLRGLRFRQHDCVTRDWQAIALTNEPRT
Sequences:
>Translated_121_residues MAPPCESERHRRYANFRLTRVEKASVRDVRDERQIEPYVILVVYDCSGPIPDLRTEASHVRSRARCPRSGRCAVGPKSVI PSSRGNDCFRRIAVLRGLRFRQHDCVTRDWQAIALTNEPRT >Mature_120_residues APPCESERHRRYANFRLTRVEKASVRDVRDERQIEPYVILVVYDCSGPIPDLRTEASHVRSRARCPRSGRCAVGPKSVIP SSRGNDCFRRIAVLRGLRFRQHDCVTRDWQAIALTNEPRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13962; Mature: 13831
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPPCESERHRRYANFRLTRVEKASVRDVRDERQIEPYVILVVYDCSGPIPDLRTEASHV CCCCCCCHHHHHHHCEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHH RSRARCPRSGRCAVGPKSVIPSSRGNDCFRRIAVLRGLRFRQHDCVTRDWQAIALTNEPR HHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC T C >Mature Secondary Structure APPCESERHRRYANFRLTRVEKASVRDVRDERQIEPYVILVVYDCSGPIPDLRTEASHV CCCCCCHHHHHHHCEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHH RSRARCPRSGRCAVGPKSVIPSSRGNDCFRRIAVLRGLRFRQHDCVTRDWQAIALTNEPR HHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA