Click here to switch to the map view.

The map label for this gene is 116249161

Identifier: 116249161

GI number: 116249161

Start: 539814

End: 540026

Strand: Reverse

Name: 116249161

Synonym: pRL120497

Alternate gene names: NA

Gene position: 540026-539814 (Counterclockwise)

Preceding gene: 116249162

Following gene: 116249160

Centisome position: 62.07

GC content: 55.87

Gene sequence:

>213_bases
GTGTCTGGCCCATTCCGAAAGGATAGACCGATGAACAGAAGCCGGTTTTTTGCAGTATTTGCATTCGTGACGCTTGTCGC
GTTCTGCGCGGTCATCCTGGCGTTTGTTCCACGGTTCGATTTGGCCGCTGCACTGCTGATCGGGATTGTCCCTGCGGGGT
ACGACATCTGGGATCAGCTCTTTCGGCGACGCCCGTCGAAATCGTCTGGATAG

Upstream 100 bases:

>100_bases
TATATGTTGATCGTCATTCTCTGCATGGTGTTCATCTATCTGTTCCCGAGCATCGTCTACATGCTGCCGAATCTACTCTA
TGGAGGACAGAGATGACGCA

Downstream 100 bases:

>100_bases
ACTGCAATTGTTCAACCGCCGCCCTTTCGTGACGGCAATCCGCTGCAAAAGCCCGTTCGTCCATCGACCTACGGGCTCTT
GGCTTGGAAATTGATCACCC

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MSGPFRKDRPMNRSRFFAVFAFVTLVAFCAVILAFVPRFDLAAALLIGIVPAGYDIWDQLFRRRPSKSSG

Sequences:

>Translated_70_residues
MSGPFRKDRPMNRSRFFAVFAFVTLVAFCAVILAFVPRFDLAAALLIGIVPAGYDIWDQLFRRRPSKSSG
>Mature_69_residues
SGPFRKDRPMNRSRFFAVFAFVTLVAFCAVILAFVPRFDLAAALLIGIVPAGYDIWDQLFRRRPSKSSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7882; Mature: 7751

Theoretical pI: Translated: 11.76; Mature: 11.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPFRKDRPMNRSRFFAVFAFVTLVAFCAVILAFVPRFDLAAALLIGIVPAGYDIWDQL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
FRRRPSKSSG
HHCCCCCCCC
>Mature Secondary Structure 
SGPFRKDRPMNRSRFFAVFAFVTLVAFCAVILAFVPRFDLAAALLIGIVPAGYDIWDQL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH
FRRRPSKSSG
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA