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The map label for this gene is ycjS [H]

Identifier: 116249019

GI number: 116249019

Start: 378422

End: 379468

Strand: Reverse

Name: ycjS [H]

Synonym: pRL120350

Alternate gene names: 116249019

Gene position: 379468-378422 (Counterclockwise)

Preceding gene: 116249026

Following gene: 116249017

Centisome position: 43.62

GC content: 61.99

Gene sequence:

>1047_bases
ATGCGTCTACTCATTCTCGGTACCGGCGGAATGGCCAACCAGCATGCCGCCAACTTCAAGGCGATCGAAGGCGTCAGTGT
CGTGGGCGGCGTCGATGTCGTCCCGGAAAGGCTCGCGGCCTTTTGCACCGAACATGGCATCGCCAACCACTTCACCACCC
TCGAGGATGCTCTCGCCTGGGGCGAGTTCGACGCAGTGGCAAACGTCACGCCGGACCGCATTCACCCCCCGACGACGCTT
CAGGCCATTGCCGCCGGCAAGCACGTCTTCTGCGAAAAGCCGCTCGCCACCGATGCCATCAAGGCCATGGAGATGACCGA
GGCCATCGAGCGATCGGGCAAGGTCGGCATGGTCAATTTCACCTATCGCAATTCGCCTGCCCTTCAGAAAGGCCGGCAGA
TGGTGCTCGCCGGCGAAATCGGGGAGATCAGGCACGTCGAGGCCTCCCACCTGCAAAGCTGGCTGGTCGGCCGCCACTGG
GGCGACTGGAAAACCGAAAGCAAATGGCTGTGGCGGCTGAGCAAGAAGCACGGATCCAACGGCGCGCTCGGCGATATCGG
AATTCACATCGTCGATTTCGCATCCTACGGTTCCGGGCTCGACGTTGCTCATGTCTTCGCCCGGCTGAAGACCTTCGACA
AGGCGCCTGATCATAAGATCGGTGAGTATGATCTCGACGCGAATGACAGCTTTACGATGAATGTCGATTTCTTCGGCGGG
GCGATCGGGACGATCCAGGCAACGCGCACGGCGGCCGGGCAGATGGATCAGCTACGCCTCAGGGTCTATGGCGAAACCGG
CTCGATCGAGATGATCTACGACACCGGAAAATCGACGCTTCGCGCCTGTCTTGGAGAAGACGTGCACACGGCGACCTGGC
GCGACGTCCCCTTCGATCCGGTCGAGACGAACTACCAGCGTTTCGTCCAGGCCGTGCGGGCGGGCAGGGCCCAGGAACCC
TCGTTCCGGCGGGCGGCCAATATCCAGAAAGTCCTGGACAAGGCGCTGGCCTCCGATCTCAGCCACGCCGATGAAGCGCT
CGGCTGA

Upstream 100 bases:

>100_bases
CTGAAGAAGAGCACGAGGCAATCGCGGATGGCTGCGATTGCGTCAGTGCTGTTTTGCCCCGGCTGAACTGCCGCGGGAAG
TTAATTCCATGGAGGATAAG

Downstream 100 bases:

>100_bases
GTTGGCCAAGCGCGCAGCGCGTTTGGGCCATCACGCCGAAGCAGGCGGCAGCAGCAAAGTGTTGAGGAAGGGCAGGAGGG
CTGCGCCGAGCGCAACGCCG

Product: GFO/IDH/MocA family oxidoreductase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MRLLILGTGGMANQHAANFKAIEGVSVVGGVDVVPERLAAFCTEHGIANHFTTLEDALAWGEFDAVANVTPDRIHPPTTL
QAIAAGKHVFCEKPLATDAIKAMEMTEAIERSGKVGMVNFTYRNSPALQKGRQMVLAGEIGEIRHVEASHLQSWLVGRHW
GDWKTESKWLWRLSKKHGSNGALGDIGIHIVDFASYGSGLDVAHVFARLKTFDKAPDHKIGEYDLDANDSFTMNVDFFGG
AIGTIQATRTAAGQMDQLRLRVYGETGSIEMIYDTGKSTLRACLGEDVHTATWRDVPFDPVETNYQRFVQAVRAGRAQEP
SFRRAANIQKVLDKALASDLSHADEALG

Sequences:

>Translated_348_residues
MRLLILGTGGMANQHAANFKAIEGVSVVGGVDVVPERLAAFCTEHGIANHFTTLEDALAWGEFDAVANVTPDRIHPPTTL
QAIAAGKHVFCEKPLATDAIKAMEMTEAIERSGKVGMVNFTYRNSPALQKGRQMVLAGEIGEIRHVEASHLQSWLVGRHW
GDWKTESKWLWRLSKKHGSNGALGDIGIHIVDFASYGSGLDVAHVFARLKTFDKAPDHKIGEYDLDANDSFTMNVDFFGG
AIGTIQATRTAAGQMDQLRLRVYGETGSIEMIYDTGKSTLRACLGEDVHTATWRDVPFDPVETNYQRFVQAVRAGRAQEP
SFRRAANIQKVLDKALASDLSHADEALG
>Mature_348_residues
MRLLILGTGGMANQHAANFKAIEGVSVVGGVDVVPERLAAFCTEHGIANHFTTLEDALAWGEFDAVANVTPDRIHPPTTL
QAIAAGKHVFCEKPLATDAIKAMEMTEAIERSGKVGMVNFTYRNSPALQKGRQMVLAGEIGEIRHVEASHLQSWLVGRHW
GDWKTESKWLWRLSKKHGSNGALGDIGIHIVDFASYGSGLDVAHVFARLKTFDKAPDHKIGEYDLDANDSFTMNVDFFGG
AIGTIQATRTAAGQMDQLRLRVYGETGSIEMIYDTGKSTLRACLGEDVHTATWRDVPFDPVETNYQRFVQAVRAGRAQEP
SFRRAANIQKVLDKALASDLSHADEALG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=251, Percent_Identity=29.4820717131474, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38029; Mature: 38029

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLILGTGGMANQHAANFKAIEGVSVVGGVDVVPERLAAFCTEHGIANHFTTLEDALAW
CEEEEEECCCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GEFDAVANVTPDRIHPPTTLQAIAAGKHVFCEKPLATDAIKAMEMTEAIERSGKVGMVNF
CCHHHHCCCCCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE
TYRNSPALQKGRQMVLAGEIGEIRHVEASHLQSWLVGRHWGDWKTESKWLWRLSKKHGSN
EECCCHHHHHCCEEEEECCCCCHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
GALGDIGIHIVDFASYGSGLDVAHVFARLKTFDKAPDHKIGEYDLDANDSFTMNVDFFGG
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEECCC
AIGTIQATRTAAGQMDQLRLRVYGETGSIEMIYDTGKSTLRACLGEDVHTATWRDVPFDP
CEEHEEHHHHHHCCCCEEEEEEECCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCC
VETNYQRFVQAVRAGRAQEPSFRRAANIQKVLDKALASDLSHADEALG
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLLILGTGGMANQHAANFKAIEGVSVVGGVDVVPERLAAFCTEHGIANHFTTLEDALAW
CEEEEEECCCCCCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GEFDAVANVTPDRIHPPTTLQAIAAGKHVFCEKPLATDAIKAMEMTEAIERSGKVGMVNF
CCHHHHCCCCCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEE
TYRNSPALQKGRQMVLAGEIGEIRHVEASHLQSWLVGRHWGDWKTESKWLWRLSKKHGSN
EECCCHHHHHCCEEEEECCCCCHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
GALGDIGIHIVDFASYGSGLDVAHVFARLKTFDKAPDHKIGEYDLDANDSFTMNVDFFGG
CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEECCC
AIGTIQATRTAAGQMDQLRLRVYGETGSIEMIYDTGKSTLRACLGEDVHTATWRDVPFDP
CEEHEEHHHHHHCCCCEEEEEEECCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCC
VETNYQRFVQAVRAGRAQEPSFRRAANIQKVLDKALASDLSHADEALG
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]