Click here to switch to the map view.

The map label for this gene is 116249026

Identifier: 116249026

GI number: 116249026

Start: 386429

End: 387526

Strand: Reverse

Name: 116249026

Synonym: pRL120357

Alternate gene names: NA

Gene position: 387526-386429 (Counterclockwise)

Preceding gene: 116249027

Following gene: 116249019

Centisome position: 44.54

GC content: 59.38

Gene sequence:

>1098_bases
ATGGTTGGCAGGCAGGCGGACCTCGTCGTTCTGAGCGACGCGGACAGAAATTTCCTCGAATCTCAGGTGCGCCGGCATAA
AGCGGCACGCTCGTTGTCGGATCGATGCCGGATGGTCTTGCTGTGCGCGCAGGGTTTGCAAAGCAAGGACGTTGCCGAAC
GCCTGGGTGTTCACGAGCACACGGTTGGCAAGTGGCGCCGCAGGTTCGTACAGGATGGTATTGAAGGGCTGACAGATGAA
TATCGTGCCGGTCGACCGCGAACTGTCTCCGATGCCCAGGTTGCTCAGGTCGTCGAGCGTACGTTGAACGTCACTCCCAA
GGATGCCACGCACTGGTCCATCCGTTCGATGGCAGCCGACAGCGGCCTTTCGCATACCACCATCCGTCGGATCTGGACCG
CATTTGGCCTGCAGCCGCATCGTGCCGAGACATTCAAGCTTTCCTCAGATCCGCTCTTCGTCGATAAGGTGCAGGACATC
GTCGGCCTTTATATGTCGCCACCGGACCGGGCGATCGTGCTATGCGTGGATGAGAAATCGCAAATCCAGGCATTGGATCG
CGAGCAGCCGGTTCTGCCTATGGCACCGGGCGTCGCCGAACGGCGCACCCATACCTATGTCCGCAACGGCACGACTTCTC
TGTTCGCCGCGCTCGACATTGCCACTGGTGCGGTGATCGGTCATTGCTACAAGCGTCACCGGGCCACTGAATTCCTCGAC
TTCCTGAAGCGGATCGACGCCGAAATGCCCAGTGGGCCGGACGTGCATCTGGTGATGGACAACTATGCGACCCACAAGAC
GCCGAGAATCAAGGCCTGGCTCGCGCGCCGCCCACACTGGCATGTTCACTTCACGCCAACGTCGGCATCCTGGATCAATC
AGGTCGAGCGGTGGTTTGCAGAGCTAACGCGAAAGCAGTTGCAGCGCGGCGTACACCGTTCCACCGCAGAACTGGAAGCC
GACATCGACGCCTTCATCGAAACCCACAACGAGAACCCCACCCCGTACAAGTGGGTCAAATCCGCCGACCAAATCCTCGC
GTCGGTCAAGCGCTTCTGCCAGAAGACAATGAACCGAACTTCAGATTCAGGTGACTAG

Upstream 100 bases:

>100_bases
AGCTCTCCTCGGCAAAAAAGGAACGCCGCCAGCTAGTCACCTGGAACCAAAGTAAGCTTCATTTTGTTCGGCTTCTGTCA
CAAGAGCAGGAGTTTGATCG

Downstream 100 bases:

>100_bases
AGCATGATGACATCAGCGTCTCATATCCGGCTTGCAGTCATTGCGCGGTCTTGGTCGTGCGGCCGTCATTGGCAATGGCG
ACGGAGTCGCTCTATGAGCT

Product: putative transposase protein

Products: NA

Alternate protein names: ISO-IS200 39 kDa protein [H]

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MVGRQADLVVLSDADRNFLESQVRRHKAARSLSDRCRMVLLCAQGLQSKDVAERLGVHEHTVGKWRRRFVQDGIEGLTDE
YRAGRPRTVSDAQVAQVVERTLNVTPKDATHWSIRSMAADSGLSHTTIRRIWTAFGLQPHRAETFKLSSDPLFVDKVQDI
VGLYMSPPDRAIVLCVDEKSQIQALDREQPVLPMAPGVAERRTHTYVRNGTTSLFAALDIATGAVIGHCYKRHRATEFLD
FLKRIDAEMPSGPDVHLVMDNYATHKTPRIKAWLARRPHWHVHFTPTSASWINQVERWFAELTRKQLQRGVHRSTAELEA
DIDAFIETHNENPTPYKWVKSADQILASVKRFCQKTMNRTSDSGD

Sequences:

>Translated_365_residues
MVGRQADLVVLSDADRNFLESQVRRHKAARSLSDRCRMVLLCAQGLQSKDVAERLGVHEHTVGKWRRRFVQDGIEGLTDE
YRAGRPRTVSDAQVAQVVERTLNVTPKDATHWSIRSMAADSGLSHTTIRRIWTAFGLQPHRAETFKLSSDPLFVDKVQDI
VGLYMSPPDRAIVLCVDEKSQIQALDREQPVLPMAPGVAERRTHTYVRNGTTSLFAALDIATGAVIGHCYKRHRATEFLD
FLKRIDAEMPSGPDVHLVMDNYATHKTPRIKAWLARRPHWHVHFTPTSASWINQVERWFAELTRKQLQRGVHRSTAELEA
DIDAFIETHNENPTPYKWVKSADQILASVKRFCQKTMNRTSDSGD
>Mature_365_residues
MVGRQADLVVLSDADRNFLESQVRRHKAARSLSDRCRMVLLCAQGLQSKDVAERLGVHEHTVGKWRRRFVQDGIEGLTDE
YRAGRPRTVSDAQVAQVVERTLNVTPKDATHWSIRSMAADSGLSHTTIRRIWTAFGLQPHRAETFKLSSDPLFVDKVQDI
VGLYMSPPDRAIVLCVDEKSQIQALDREQPVLPMAPGVAERRTHTYVRNGTTSLFAALDIATGAVIGHCYKRHRATEFLD
FLKRIDAEMPSGPDVHLVMDNYATHKTPRIKAWLARRPHWHVHFTPTSASWINQVERWFAELTRKQLQRGVHRSTAELEA
DIDAFIETHNENPTPYKWVKSADQILASVKRFCQKTMNRTSDSGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 41506; Mature: 41506

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGRQADLVVLSDADRNFLESQVRRHKAARSLSDRCRMVLLCAQGLQSKDVAERLGVHEH
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHH
TVGKWRRRFVQDGIEGLTDEYRAGRPRTVSDAQVAQVVERTLNVTPKDATHWSIRSMAAD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
SGLSHTTIRRIWTAFGLQPHRAETFKLSSDPLFVDKVQDIVGLYMSPPDRAIVLCVDEKS
CCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHH
QIQALDREQPVLPMAPGVAERRTHTYVRNGTTSLFAALDIATGAVIGHCYKRHRATEFLD
HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLKRIDAEMPSGPDVHLVMDNYATHKTPRIKAWLARRPHWHVHFTPTSASWINQVERWFA
HHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
ELTRKQLQRGVHRSTAELEADIDAFIETHNENPTPYKWVKSADQILASVKRFCQKTMNRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
SDSGD
CCCCC
>Mature Secondary Structure
MVGRQADLVVLSDADRNFLESQVRRHKAARSLSDRCRMVLLCAQGLQSKDVAERLGVHEH
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHH
TVGKWRRRFVQDGIEGLTDEYRAGRPRTVSDAQVAQVVERTLNVTPKDATHWSIRSMAAD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
SGLSHTTIRRIWTAFGLQPHRAETFKLSSDPLFVDKVQDIVGLYMSPPDRAIVLCVDEKS
CCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHH
QIQALDREQPVLPMAPGVAERRTHTYVRNGTTSLFAALDIATGAVIGHCYKRHRATEFLD
HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLKRIDAEMPSGPDVHLVMDNYATHKTPRIKAWLARRPHWHVHFTPTSASWINQVERWFA
HHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
ELTRKQLQRGVHRSTAELEADIDAFIETHNENPTPYKWVKSADQILASVKRFCQKTMNRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
SDSGD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]