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The map label for this gene is ligJ

Identifier: 116248945

GI number: 116248945

Start: 291450

End: 292472

Strand: Direct

Name: ligJ

Synonym: pRL120276

Alternate gene names: NA

Gene position: 291450-292472 (Clockwise)

Preceding gene: 116248944

Following gene: 116248946

Centisome position: 33.5

GC content: 60.22

Gene sequence:

>1023_bases
ATGATCATCGACTGCCACGGCCACTACACCACGGCCCCTGCGCTCCATGGCGAATGGCGAGCACGACAGGAGGCCGCCAT
CAAATCGGGCGGCGATATCGATCCCGCCTATCCAGACATTTCCGACGATGAGATCCGCGAGACCATCGAGGCCAATCAGC
TGCGGCTGCTGCGCGAGCGCGGCGCCGACATGACTATTTTCTCGCCTCGGGCTTCGGCGATGGCGCCGCATATCGGCGGA
GAATTGGTGGCAAAGGTCTGGGCGCGCCGTTCCAACGATCTGATCAAGCGCGTGGTCGATCTCTATCCCGAGACTTTCGT
GGGCGTGTGCCAGCTGCCGCAATCTCCTGGTGTCTCGATCGCCAACGCGATCGACGAGCTTGAGCGCTGCGTCAACGAAC
TCGGCTTCGTCGGCTGCAATCTCAATCCCGATCCCTCCGGCGGCAAGTTCGATTCGCCGCCGCTCACCGATCGCGCCTGG
TACCCCTTCTTCGAAAAGATGGTGGAACTCGACGTTCCCGCGATGATCCACGTTTCCGGCAGTTGCAATTGTGCGATGCA
TGCGACCGGCGCCTATTACATTGCCGCAGACACCATTGCCTTCATGCAGTTCGTCGAGGGCGACCTGTTTGCGGATTTCC
CCTCGCTGCGGTTCATCATTCCGCATGGCGGCGGAGCCGTTCCCTATCACTGGGGCCGTTATCGCGGCCTCTCCGACATG
CTGAAGCGGCCGCCTCTGGCCGAGCACGTGATGAAGAACGTCTATTTCGATACCTGCGTCTATCATCAGCCGGGCATCGA
CCTGTTGTTCGAGGTGATCGATGTGGAAAACATCCTGTTCGGATCGGAAATGGTTGGCGCAGTGCGCGGGATCGACCCGC
AGACGGGTCACTATTTCGACGACACCAAGCGCTATATCGAGGCTCTGACGATATCCGATGAGGACAAGCGGAAGGTGTTC
GAACTCAACGCGCGCCGCGTCTATCCGCGTCTCGATGCACAGCTCAAGGCAAGGGGGCTGTGA

Upstream 100 bases:

>100_bases
AGCCGCGCCACCGCCGGCTGGTTCCCCATGCCTTCCCCTCCGACCGCGGGATTCGCTGCCGAGGCGAACGCATCTTTGCC
GCTACAGGAACCTCAAAGAT

Downstream 100 bases:

>100_bases
TGGCAAATTTCCAGATGGATCCCGATTGGCTCCGCTATCATCCCGACCCGACCAAACCGCGTTACATTCCGCCGTCTGGT
GCAGTGGATGCGCATTGCCA

Product: putative 4-oxalomesaconate hydratase

Products: NA

Alternate protein names: 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; O-Pyrocatechuate Decarboxylase; Aminocarboxymuconate-Semialdehyde Decarboxylase; 5-Carboxyvanillate Decarboxylase; Amidohydrolase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; Amidohydrolase/Decarboxylase; FLDW Protein; LOW QUALITY PROTEIN 4-Oxalomesaconate Hydratase; Metal Dependent Hydrolase; Amidohydrolase Family

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MIIDCHGHYTTAPALHGEWRARQEAAIKSGGDIDPAYPDISDDEIRETIEANQLRLLRERGADMTIFSPRASAMAPHIGG
ELVAKVWARRSNDLIKRVVDLYPETFVGVCQLPQSPGVSIANAIDELERCVNELGFVGCNLNPDPSGGKFDSPPLTDRAW
YPFFEKMVELDVPAMIHVSGSCNCAMHATGAYYIAADTIAFMQFVEGDLFADFPSLRFIIPHGGGAVPYHWGRYRGLSDM
LKRPPLAEHVMKNVYFDTCVYHQPGIDLLFEVIDVENILFGSEMVGAVRGIDPQTGHYFDDTKRYIEALTISDEDKRKVF
ELNARRVYPRLDAQLKARGL

Sequences:

>Translated_340_residues
MIIDCHGHYTTAPALHGEWRARQEAAIKSGGDIDPAYPDISDDEIRETIEANQLRLLRERGADMTIFSPRASAMAPHIGG
ELVAKVWARRSNDLIKRVVDLYPETFVGVCQLPQSPGVSIANAIDELERCVNELGFVGCNLNPDPSGGKFDSPPLTDRAW
YPFFEKMVELDVPAMIHVSGSCNCAMHATGAYYIAADTIAFMQFVEGDLFADFPSLRFIIPHGGGAVPYHWGRYRGLSDM
LKRPPLAEHVMKNVYFDTCVYHQPGIDLLFEVIDVENILFGSEMVGAVRGIDPQTGHYFDDTKRYIEALTISDEDKRKVF
ELNARRVYPRLDAQLKARGL
>Mature_340_residues
MIIDCHGHYTTAPALHGEWRARQEAAIKSGGDIDPAYPDISDDEIRETIEANQLRLLRERGADMTIFSPRASAMAPHIGG
ELVAKVWARRSNDLIKRVVDLYPETFVGVCQLPQSPGVSIANAIDELERCVNELGFVGCNLNPDPSGGKFDSPPLTDRAW
YPFFEKMVELDVPAMIHVSGSCNCAMHATGAYYIAADTIAFMQFVEGDLFADFPSLRFIIPHGGGAVPYHWGRYRGLSDM
LKRPPLAEHVMKNVYFDTCVYHQPGIDLLFEVIDVENILFGSEMVGAVRGIDPQTGHYFDDTKRYIEALTISDEDKRKVF
ELNARRVYPRLDAQLKARGL

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37994; Mature: 37994

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIDCHGHYTTAPALHGEWRARQEAAIKSGGDIDPAYPDISDDEIRETIEANQLRLLRER
CEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GADMTIFSPRASAMAPHIGGELVAKVWARRSNDLIKRVVDLYPETFVGVCQLPQSPGVSI
CCCEEEECCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHH
ANAIDELERCVNELGFVGCNLNPDPSGGKFDSPPLTDRAWYPFFEKMVELDVPAMIHVSG
HHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECC
SCNCAMHATGAYYIAADTIAFMQFVEGDLFADFPSLRFIIPHGGGAVPYHWGRYRGLSDM
CCCEEEECCCEEEEHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCCCCCHHHCCHHHH
LKRPPLAEHVMKNVYFDTCVYHQPGIDLLFEVIDVENILFGSEMVGAVRGIDPQTGHYFD
HHCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHH
DTKRYIEALTISDEDKRKVFELNARRVYPRLDAQLKARGL
HHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCHHHCCCC
>Mature Secondary Structure
MIIDCHGHYTTAPALHGEWRARQEAAIKSGGDIDPAYPDISDDEIRETIEANQLRLLRER
CEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GADMTIFSPRASAMAPHIGGELVAKVWARRSNDLIKRVVDLYPETFVGVCQLPQSPGVSI
CCCEEEECCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCCCCCHH
ANAIDELERCVNELGFVGCNLNPDPSGGKFDSPPLTDRAWYPFFEKMVELDVPAMIHVSG
HHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECC
SCNCAMHATGAYYIAADTIAFMQFVEGDLFADFPSLRFIIPHGGGAVPYHWGRYRGLSDM
CCCEEEECCCEEEEHHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCCCCCHHHCCHHHH
LKRPPLAEHVMKNVYFDTCVYHQPGIDLLFEVIDVENILFGSEMVGAVRGIDPQTGHYFD
HHCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHH
DTKRYIEALTISDEDKRKVFELNARRVYPRLDAQLKARGL
HHHHHHHHHCCCCCHHHHHHCCCCHHCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA