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The map label for this gene is yfbS [C]

Identifier: 116248900

GI number: 116248900

Start: 239373

End: 241139

Strand: Direct

Name: yfbS [C]

Synonym: pRL120230

Alternate gene names: 116248900

Gene position: 239373-241139 (Clockwise)

Preceding gene: 116248892

Following gene: 116248909

Centisome position: 27.51

GC content: 58.35

Gene sequence:

>1767_bases
ATGCGCGCTGATCAATGGCTATCTCTTCTCATCATCGCGCTGATGATGGGCGCGTTCCTGTGGGGCCGTTATCGATACGA
TATAGTCGCCGTAAGCTCCCTTCTCGCTGCAATCATTGTCGGCATCGTCCCCGCCAAGAATGCTTTTTCCGGCTTTTCCG
ATGACATTGTTATCATCGTTGGCAGCGCGCTCATCGTCAGTGCGGCGATATCCAGATCGGGGATCATGGATGTCGCCTTG
CGCAGATTTTCTCCCGAACGACGCGGGCCACGGATGCAGCTGATCATTCTGGTTGCCATTGTCGCAGCCCTGTCGGCTTT
CATCAAAAACATTGGTGCGCTGGCGATCATGATCCCGGTCGCTGTGCAAATGGCCCGGAAATCACGCGTATCACCGTCGA
TGTTCCTGATGCCGATGTCTTTCGCCTCTCTGCTCGGAGGGCTTATGACGCAGATCGGCACGTCGCCAAACATCATCGTT
TCCCGGGTGCGCGAGGAGATCACCGGGCAGCCGTTCATGATGTTTGACTATACGCCTGTCGGCCTGGCGCTCTCGGTCGC
CGGCGTTGTCTTTCTGGCGCTGTTCTACAAGCTGCTGCCTGAAAGATCACGGGTCGAAACGTCGATGGATGAGGCGGTGG
CGATCAAAAACTACACGACCGAGGCCAAGGTCACCACGCCATCAGGGGCGATCGGGCGGTCCGTCAGCTGGCTGCAGAAG
CCGGCGGGCGGCGATGCGATGGTGACTGCGATTATCGGTGGCAACGGCCAAAGGCGAACGCCCCTTCCCGATACGGTGCT
CAAGGATGGCGACCTCCTTATTATCGAGGGGGAGCAGAGCGCCCTCGACAAGATCGTCAGTGAAGCCAAGCTTCAACTGT
CCGACCGTAAACACGAGCCTGAGACACGCCAAGACATCAGTTCTGTTGAAGCTATCGTTGGCGAACATTCCCGATTGATC
GGCGTCAGCGCAAAAGACGTTTCTCTCTTCCACAATACCGGGCTCAACCTTCTTGCCGTCAGCCGCCGCGACAGGCGCTT
CACCGAGCGCCTGGGCGAGATCAAGATCCGCAATGGCGACGTCGTGGTCTTGCAGGGCGACTTGCAGAAACTACCGGATC
TTCTACGCGAATGGGGATGTTTGCCGCTGGTCGAACGAGATATGAAGCTCGGCAACGCCCGCAATGGCATGATCCCCGTC
ATTATCCTGATGGCAACGATGGGGGCGACAGCCTTCGGGGGCATTCCCGTCGCGACAGCGTTTTTTGCCGCAGCTTTTCT
GATGGTGGTCACCGGATCCGTTCCATTGCGGGAAGTTTATCAGCATCTCGATGCCCCCATTCTGATCATGCTGGCCGCTC
TCATTCCGATCAGCGACTCGCTCAGGACCACGGGAACCACCGACATCATCGCGGACCTCCTCTCGCGAACCGCCGAAATG
CTCCCGCCCTTCGGTGCTTTGGCTCTCATCCTGGTTGCGGCCATGGCCGTAACCCCGTTTTTGAACAATGCAGCGACGGT
TCTGGTCATGGCACCGATCGCCGCGACCTTTGCCGAGAAGCTGGGCTTCAGGCCCGATGCCTTTCTGATGGCGGTGGCAA
TTGGAGCCGGCTGCGACTTCCTCACGCCCATCGGACACCAGTGCAACACGCTGGTGATGGGACCGGGCGGATATCGTTTT
GGTGACTACGCCCGACTGGGTCTGCCGCTCTCGCTCATTGTGGCGATCGTTAGTGTGCCGATCCTGTTGTTGGTTTGGCC
GATTTGA

Upstream 100 bases:

>100_bases
TCAGCGGATATAACGGCTGGGATAGACGAGAAAAAATTTCTCCGCCTCGCCGCATCGTTCTCTTGCTTGAAACGTTAGTT
GCTACCACCGGGATGCAAAC

Downstream 100 bases:

>100_bases
TTTCAACTGCTCGGGCATTGCGGCGGCCGATAAGAAGTTTTGAAGCAGAGATGCGTTCCTCACGCAGCGACGTCTGGAAT
AGGCAAGCCCAGGATCTCGG

Product: putative transmembrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MRADQWLSLLIIALMMGAFLWGRYRYDIVAVSSLLAAIIVGIVPAKNAFSGFSDDIVIIVGSALIVSAAISRSGIMDVAL
RRFSPERRGPRMQLIILVAIVAALSAFIKNIGALAIMIPVAVQMARKSRVSPSMFLMPMSFASLLGGLMTQIGTSPNIIV
SRVREEITGQPFMMFDYTPVGLALSVAGVVFLALFYKLLPERSRVETSMDEAVAIKNYTTEAKVTTPSGAIGRSVSWLQK
PAGGDAMVTAIIGGNGQRRTPLPDTVLKDGDLLIIEGEQSALDKIVSEAKLQLSDRKHEPETRQDISSVEAIVGEHSRLI
GVSAKDVSLFHNTGLNLLAVSRRDRRFTERLGEIKIRNGDVVVLQGDLQKLPDLLREWGCLPLVERDMKLGNARNGMIPV
IILMATMGATAFGGIPVATAFFAAAFLMVVTGSVPLREVYQHLDAPILIMLAALIPISDSLRTTGTTDIIADLLSRTAEM
LPPFGALALILVAAMAVTPFLNNAATVLVMAPIAATFAEKLGFRPDAFLMAVAIGAGCDFLTPIGHQCNTLVMGPGGYRF
GDYARLGLPLSLIVAIVSVPILLLVWPI

Sequences:

>Translated_588_residues
MRADQWLSLLIIALMMGAFLWGRYRYDIVAVSSLLAAIIVGIVPAKNAFSGFSDDIVIIVGSALIVSAAISRSGIMDVAL
RRFSPERRGPRMQLIILVAIVAALSAFIKNIGALAIMIPVAVQMARKSRVSPSMFLMPMSFASLLGGLMTQIGTSPNIIV
SRVREEITGQPFMMFDYTPVGLALSVAGVVFLALFYKLLPERSRVETSMDEAVAIKNYTTEAKVTTPSGAIGRSVSWLQK
PAGGDAMVTAIIGGNGQRRTPLPDTVLKDGDLLIIEGEQSALDKIVSEAKLQLSDRKHEPETRQDISSVEAIVGEHSRLI
GVSAKDVSLFHNTGLNLLAVSRRDRRFTERLGEIKIRNGDVVVLQGDLQKLPDLLREWGCLPLVERDMKLGNARNGMIPV
IILMATMGATAFGGIPVATAFFAAAFLMVVTGSVPLREVYQHLDAPILIMLAALIPISDSLRTTGTTDIIADLLSRTAEM
LPPFGALALILVAAMAVTPFLNNAATVLVMAPIAATFAEKLGFRPDAFLMAVAIGAGCDFLTPIGHQCNTLVMGPGGYRF
GDYARLGLPLSLIVAIVSVPILLLVWPI
>Mature_588_residues
MRADQWLSLLIIALMMGAFLWGRYRYDIVAVSSLLAAIIVGIVPAKNAFSGFSDDIVIIVGSALIVSAAISRSGIMDVAL
RRFSPERRGPRMQLIILVAIVAALSAFIKNIGALAIMIPVAVQMARKSRVSPSMFLMPMSFASLLGGLMTQIGTSPNIIV
SRVREEITGQPFMMFDYTPVGLALSVAGVVFLALFYKLLPERSRVETSMDEAVAIKNYTTEAKVTTPSGAIGRSVSWLQK
PAGGDAMVTAIIGGNGQRRTPLPDTVLKDGDLLIIEGEQSALDKIVSEAKLQLSDRKHEPETRQDISSVEAIVGEHSRLI
GVSAKDVSLFHNTGLNLLAVSRRDRRFTERLGEIKIRNGDVVVLQGDLQKLPDLLREWGCLPLVERDMKLGNARNGMIPV
IILMATMGATAFGGIPVATAFFAAAFLMVVTGSVPLREVYQHLDAPILIMLAALIPISDSLRTTGTTDIIADLLSRTAEM
LPPFGALALILVAAMAVTPFLNNAATVLVMAPIAATFAEKLGFRPDAFLMAVAIGAGCDFLTPIGHQCNTLVMGPGGYRF
GDYARLGLPLSLIVAIVSVPILLLVWPI

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=608, Percent_Identity=27.6315789473684, Blast_Score=182, Evalue=6e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 63044; Mature: 63044

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRADQWLSLLIIALMMGAFLWGRYRYDIVAVSSLLAAIIVGIVPAKNAFSGFSDDIVIIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEE
GSALIVSAAISRSGIMDVALRRFSPERRGPRMQLIILVAIVAALSAFIKNIGALAIMIPV
HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVQMARKSRVSPSMFLMPMSFASLLGGLMTQIGTSPNIIVSRVREEITGQPFMMFDYTPV
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCHH
GLALSVAGVVFLALFYKLLPERSRVETSMDEAVAIKNYTTEAKVTTPSGAIGRSVSWLQK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCEEECCCCCCCCCHHHHHC
PAGGDAMVTAIIGGNGQRRTPLPDTVLKDGDLLIIEGEQSALDKIVSEAKLQLSDRKHEP
CCCCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCC
ETRQDISSVEAIVGEHSRLIGVSAKDVSLFHNTGLNLLAVSRRDRRFTERLGEIKIRNGD
HHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCCEEEECHHHHHHHHHHCCEEEECCC
VVVLQGDLQKLPDLLREWGCLPLVERDMKLGNARNGMIPVIILMATMGATAFGGIPVATA
EEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHH
FFAAAFLMVVTGSVPLREVYQHLDAPILIMLAALIPISDSLRTTGTTDIIADLLSRTAEM
HHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LPPFGALALILVAAMAVTPFLNNAATVLVMAPIAATFAEKLGFRPDAFLMAVAIGAGCDF
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH
LTPIGHQCNTLVMGPGGYRFGDYARLGLPLSLIVAIVSVPILLLVWPI
HCCCCCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRADQWLSLLIIALMMGAFLWGRYRYDIVAVSSLLAAIIVGIVPAKNAFSGFSDDIVIIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEE
GSALIVSAAISRSGIMDVALRRFSPERRGPRMQLIILVAIVAALSAFIKNIGALAIMIPV
HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVQMARKSRVSPSMFLMPMSFASLLGGLMTQIGTSPNIIVSRVREEITGQPFMMFDYTPV
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCHH
GLALSVAGVVFLALFYKLLPERSRVETSMDEAVAIKNYTTEAKVTTPSGAIGRSVSWLQK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCCEEECCCCCCCCCHHHHHC
PAGGDAMVTAIIGGNGQRRTPLPDTVLKDGDLLIIEGEQSALDKIVSEAKLQLSDRKHEP
CCCCCEEEEEEECCCCCCCCCCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCC
ETRQDISSVEAIVGEHSRLIGVSAKDVSLFHNTGLNLLAVSRRDRRFTERLGEIKIRNGD
HHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCCCEEEECHHHHHHHHHHCCEEEECCC
VVVLQGDLQKLPDLLREWGCLPLVERDMKLGNARNGMIPVIILMATMGATAFGGIPVATA
EEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHCCCHHHHHH
FFAAAFLMVVTGSVPLREVYQHLDAPILIMLAALIPISDSLRTTGTTDIIADLLSRTAEM
HHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LPPFGALALILVAAMAVTPFLNNAATVLVMAPIAATFAEKLGFRPDAFLMAVAIGAGCDF
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCH
LTPIGHQCNTLVMGPGGYRFGDYARLGLPLSLIVAIVSVPILLLVWPI
HCCCCCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]