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The map label for this gene is flgH [H]

Identifier: 114800335

GI number: 114800335

Start: 248091

End: 248810

Strand: Direct

Name: flgH [H]

Synonym: HNE_0258

Alternate gene names: 114800335

Gene position: 248091-248810 (Clockwise)

Preceding gene: 114797541

Following gene: 114800308

Centisome position: 6.7

GC content: 59.72

Gene sequence:

>720_bases
ATGGGTCCTCGCACAATGAAAACCTTCTTCTCAATGCCCCTCGTCGCGCTCGCTGCTGCAGCGTGCGCCAGTTCTTCCCA
GCCTGTGCCGGATTTCGATCCGCCTGTGCCTTATGCCGGTTACCCGGGCGCAGTGCCCGAGCCCGTCGATCCGAACATCC
AGAACGCTTCGCTCTGGGAAACGGCGCCTACGGCGCTCCTCAGTATGCGGCGGGCCAAGGAGGTCGGTGACCTGCTGACC
GTGGTGGTCGAGATGAACGACCAGGCAAGCCTTCAAAGCTCGCTCTCCCGCAACCGGGACTCCAGCGATGATATGAACGT
CGAAGCGTTGTTCGGTCTTCCGGAATGGGCAAATGGTGTCCTTCCGGGCGGCGCCAGCCTGTCGCCGGGCGTCGATGTGT
CCCGCAACTCCAGTCAGAACGGTTCAGGCGCTGTAAACCGCGCTGAAAAGGTAACCTTCACGCTCGCTGCGCGCGTTATC
GGTGTGGAGCCAAACGGGAACCTGATTATTCACGGCTACCAGCAGACGCGGGTTAGCAATGAAGTCCGCTATCTGACGGT
TTCAGGCGTTATCCGGGCGCAGGACATCACCCGCATGAACGCTGTGACCTATGACAAGATCGCAGATGCCAAGCTGGCCT
ATGTCAGCAATGGTGACGCGTCATCGGCCACCGACCGAAAAATCGGCACCAAGATTATTGACCGCGTAGTTCCGTTCTAG

Upstream 100 bases:

>100_bases
CCACCGGCCGCGCCATGGGAGAAGCCTCTCTCAACGAGCCGGTTACCGTTCTGAACCTTGAGTCTCGTCAGATGGTTCAG
GGAATTGTCCAGGAAAGCGG

Downstream 100 bases:

>100_bases
AGCCCTTCCATGATGAAAAACCTCGTCACTGCCCTCGTTGCCGTTATCTGCGTCGTTATAGGCGGCGTGGTTGGACACAT
GCTCCGCGGGGGCAGCGGTG

Product: flagellar L-ring protein FlgH

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MGPRTMKTFFSMPLVALAAAACASSSQPVPDFDPPVPYAGYPGAVPEPVDPNIQNASLWETAPTALLSMRRAKEVGDLLT
VVVEMNDQASLQSSLSRNRDSSDDMNVEALFGLPEWANGVLPGGASLSPGVDVSRNSSQNGSGAVNRAEKVTFTLAARVI
GVEPNGNLIIHGYQQTRVSNEVRYLTVSGVIRAQDITRMNAVTYDKIADAKLAYVSNGDASSATDRKIGTKIIDRVVPF

Sequences:

>Translated_239_residues
MGPRTMKTFFSMPLVALAAAACASSSQPVPDFDPPVPYAGYPGAVPEPVDPNIQNASLWETAPTALLSMRRAKEVGDLLT
VVVEMNDQASLQSSLSRNRDSSDDMNVEALFGLPEWANGVLPGGASLSPGVDVSRNSSQNGSGAVNRAEKVTFTLAARVI
GVEPNGNLIIHGYQQTRVSNEVRYLTVSGVIRAQDITRMNAVTYDKIADAKLAYVSNGDASSATDRKIGTKIIDRVVPF
>Mature_238_residues
GPRTMKTFFSMPLVALAAAACASSSQPVPDFDPPVPYAGYPGAVPEPVDPNIQNASLWETAPTALLSMRRAKEVGDLLTV
VVEMNDQASLQSSLSRNRDSSDDMNVEALFGLPEWANGVLPGGASLSPGVDVSRNSSQNGSGAVNRAEKVTFTLAARVIG
VEPNGNLIIHGYQQTRVSNEVRYLTVSGVIRAQDITRMNAVTYDKIADAKLAYVSNGDASSATDRKIGTKIIDRVVPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=216, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 25397; Mature: 25266

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPRTMKTFFSMPLVALAAAACASSSQPVPDFDPPVPYAGYPGAVPEPVDPNIQNASLWE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
TAPTALLSMRRAKEVGDLLTVVVEMNDQASLQSSLSRNRDSSDDMNVEALFGLPEWANGV
HHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHCCC
LPGGASLSPGVDVSRNSSQNGSGAVNRAEKVTFTLAARVIGVEPNGNLIIHGYQQTRVSN
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEEEEECCCCCEEEECHHHHCCCC
EVRYLTVSGVIRAQDITRMNAVTYDKIADAKLAYVSNGDASSATDRKIGTKIIDRVVPF
CEEEEEECCEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GPRTMKTFFSMPLVALAAAACASSSQPVPDFDPPVPYAGYPGAVPEPVDPNIQNASLWE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
TAPTALLSMRRAKEVGDLLTVVVEMNDQASLQSSLSRNRDSSDDMNVEALFGLPEWANGV
HHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHCCC
LPGGASLSPGVDVSRNSSQNGSGAVNRAEKVTFTLAARVIGVEPNGNLIIHGYQQTRVSN
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEEEEECCCCCEEEECHHHHCCCC
EVRYLTVSGVIRAQDITRMNAVTYDKIADAKLAYVSNGDASSATDRKIGTKIIDRVVPF
CEEEEEECCEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA