Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114800308
Identifier: 114800308
GI number: 114800308
Start: 248877
End: 249386
Strand: Direct
Name: 114800308
Synonym: HNE_0259
Alternate gene names: NA
Gene position: 248877-249386 (Clockwise)
Preceding gene: 114800335
Following gene: 114799762
Centisome position: 6.72
GC content: 55.1
Gene sequence:
>510_bases GTGGTTGGACACATGCTCCGCGGGGGCAGCGGTGAGGCATCCGCTGCCTCAAAAGTGGAAGGGGAGGCGCACGGAGAAAA GGAAGCCGGCGGCGACCATGCGCCAAAAGAGAAAGACAAAGACGCGCATGGCGGTGAAAAAAAGGCCAAGAAGGATGATC ATGGCGCATCCAGCAGCAGCTCGGGGTCAGCCTATTTCAAGTTCAGCCGCGAATTTGTTGTGCCCATCATCCAGAATGAG CGCGTCGCAAGTCTTGTTATCCTCAATATCAATATTGAGTCCGACGCTGCCATGTCCGACAAGCTGTTCTCGCAGGAACC GGTGATCCGCGATGTCGTGATGACGACGCTCATCGAGATCAGCGGCGACGGCAAGACGTTCCAATCGATGACGAGCATCG AGAACTATGAAACGCTCCGTTCCCTGATCCTCGGCGCGCTTCAAAAGAAGTTTCCGGATATGGGGATCAAGAATATCCTG ATCCTCGATATTGCCCGCCAGGATCTCTGA
Upstream 100 bases:
>100_bases CACCAAGATTATTGACCGCGTAGTTCCGTTCTAGAGCCCTTCCATGATGAAAAACCTCGTCACTGCCCTCGTTGCCGTTA TCTGCGTCGTTATAGGCGGC
Downstream 100 bases:
>100_bases TCTCCTCAGGGGTGGCGGGCAATCCTCGTTAGCCGGGATCAGAGCCTTCTGGCTTGGGCCAGATCAACCGTCAAACCAGA TGCCGTGCCGAGGCGTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MVGHMLRGGSGEASAASKVEGEAHGEKEAGGDHAPKEKDKDAHGGEKKAKKDDHGASSSSSGSAYFKFSREFVVPIIQNE RVASLVILNINIESDAAMSDKLFSQEPVIRDVVMTTLIEISGDGKTFQSMTSIENYETLRSLILGALQKKFPDMGIKNIL ILDIARQDL
Sequences:
>Translated_169_residues MVGHMLRGGSGEASAASKVEGEAHGEKEAGGDHAPKEKDKDAHGGEKKAKKDDHGASSSSSGSAYFKFSREFVVPIIQNE RVASLVILNINIESDAAMSDKLFSQEPVIRDVVMTTLIEISGDGKTFQSMTSIENYETLRSLILGALQKKFPDMGIKNIL ILDIARQDL >Mature_169_residues MVGHMLRGGSGEASAASKVEGEAHGEKEAGGDHAPKEKDKDAHGGEKKAKKDDHGASSSSSGSAYFKFSREFVVPIIQNE RVASLVILNINIESDAAMSDKLFSQEPVIRDVVMTTLIEISGDGKTFQSMTSIENYETLRSLILGALQKKFPDMGIKNIL ILDIARQDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18235; Mature: 18235
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGHMLRGGSGEASAASKVEGEAHGEKEAGGDHAPKEKDKDAHGGEKKAKKDDHGASSSS CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGSAYFKFSREFVVPIIQNERVASLVILNINIESDAAMSDKLFSQEPVIRDVVMTTLIEI CCCEEEEECCEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHC SGDGKTFQSMTSIENYETLRSLILGALQKKFPDMGIKNILILDIARQDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MVGHMLRGGSGEASAASKVEGEAHGEKEAGGDHAPKEKDKDAHGGEKKAKKDDHGASSSS CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGSAYFKFSREFVVPIIQNERVASLVILNINIESDAAMSDKLFSQEPVIRDVVMTTLIEI CCCEEEEECCEEEEEEECCCCEEEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHC SGDGKTFQSMTSIENYETLRSLILGALQKKFPDMGIKNILILDIARQDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA