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The map label for this gene is mmgC [H]

Identifier: 114800213

GI number: 114800213

Start: 672196

End: 673980

Strand: Direct

Name: mmgC [H]

Synonym: HNE_0668

Alternate gene names: 114800213

Gene position: 672196-673980 (Clockwise)

Preceding gene: 114799069

Following gene: 114799086

Centisome position: 18.14

GC content: 61.68

Gene sequence:

>1785_bases
ATGCCCCGTTATGACGCCCCCGTTCGCGACATGCAGTTTGTCCTGCACGAGCTGCTGCAACTGCAGAATTATTCCAATCT
TCCTGGCTTCGCCGATGCCTCGCCCGAGACGATCGACCAGATTCTCGATGAAGGCGCAAAGTTCGCCAAGAACGTGCTGT
TCCCGCTGAACGCTGTCGGCGACAAACAGGGCTGCAAGCGCGCCTCTGACGCCAGCGTCAAAACGCCGGACGGTTTCCCC
GACGCTTACAAACAGCTCGTCGAGAATGGCTGGCCGCTGCTCTCGGCCCATCCCGAGATGGGCGGGCAGGGGCTTCCCCA
CGCGGTCAACATCGCCTGGACCGAGATGGTCTCCTCTTCGAACATGGCTTTCGGCATGTATCCTGGCCTCACCCACGGCG
CGTATCAGGCGCTGATGGCAGGCGGCTCCGATGAGCTGAAAGCCAAGTACGGCCCCAAGATGGCATCGGGCGAATGGGCC
GGCACCATGAACCTGACCGAGCCCCATTGCGGCACAGACCTCGGCCTGATGAAGACCAAAGCCGTCCCCCAGGGTGATGG
CACCTACAAGATCACCGGCCAGAAAATCTGGATTTCCGGCGGCGAGCAGGACCTCACCGACAATATCATTCACCTTGTCC
TTGCCCGTATCGAGGGCGCGCCCGAAGGCATCAAGGGTATCTCACTGTTCGTCGTGCCGAAATATATGGTGAAGGAAGAC
GGCAGCCTCGGAGAGCGCAACGCCTGCCAGTGCGGCGGCCTTGAAGAAAAGATGGGCATCCACGGCAACGCCACCTGCGT
CATGAACTATGACGGGGCGACCGGCTGGCTCGTCGGCGAAGAGCATAAAGGCATGCGCACCATGTTCGTCATGATGAACG
AAGCGCGCCTCGGCGTCGGCCTTCAGGGCATGTCCCAGGCCGAGATCGCTTACCAGAACGCGCTCGACTTCGCCAAGGAC
CGCGTCCAGGGCCGCTCATTGACCGGCGTTCAGGCGCCCGACAAGCCTGCCGACCCAATCATCGTCCACCCGGACGTGCG
CCGCATGTTGCTGGAACAGAAAGCCTTCCTCGAAGGCGCCCGTGCGTTCGTTTACTGGATGGCCTTCCAGGGCGACCTGC
AACACAAGTCTCCCGACGAAGCCGTCCAGCAGAAAGCCGAAGACTATATGGCGCTGCTCACCCCGGTGGTGAAAGCCTAC
CTCACCCATAAGGGCTATGAGAGCGCCAATCTCGGCCTGCAGGTCCATGGCGGCTCGGGCTTTACCCGAGAATGGGGCCT
CGAACAGATCGTCCGCGATTGCCGCATCAGCCTGATCTATGAAGGCACCAACGGCGTCCAGGCGCTCGACCTCGTGGGCC
GCAAGCTCGGCGCAAATGGTGGCCGCGCGGTCTTCTCCTTCTTCGCCGAGATCGACGAATTCATCGCCGAGAATGACAAG
GTCGAAGGGCTCGAACTCTATGTCGAAGGCCTCAAGACTGTCCGCGCCCAGCTTCAGGACGGTACGATGTGGCTGATGCA
GAACGGCATGAGCGACTTCAACAATGCCGGGGCCTCCAGCCATGACTATCTGCATCTGATGGGCCTCACCGCGCTCGCCT
TCATGTGGGCCCGCATGGCCAAGATCGCGCTGGAGAAGAAGGACAGCGGCGACCCGTTCTATGCTGCCAAGCTCGCCACC
GGCCGTTACTTTGTCGAGCGCATGTTGCCCGACGCGCCGGCCCATCTCGCCAAGGTAAAGACCGGCGCGGCCGCCATGAT
GGCGCTCGACGCCGAGCAATTCTGA

Upstream 100 bases:

>100_bases
CTGACAATTTTGAAGATAATGAAGCGCGTTGGAATGACTTTTCCAACGCGCTTTGGCATTGAGGACTCCTGAATTTCTTT
TTCTTAGGAGTTTTCCAAAG

Downstream 100 bases:

>100_bases
CGCGGTATCCCTGACGCGGCGGCACGGCTGGAGAATCCGGGTCGCCGCGCTTACATGCTTACGTGAACGTAAGCGGCAAC
TTTACGCCGCGACAAGGATG

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MPRYDAPVRDMQFVLHELLQLQNYSNLPGFADASPETIDQILDEGAKFAKNVLFPLNAVGDKQGCKRASDASVKTPDGFP
DAYKQLVENGWPLLSAHPEMGGQGLPHAVNIAWTEMVSSSNMAFGMYPGLTHGAYQALMAGGSDELKAKYGPKMASGEWA
GTMNLTEPHCGTDLGLMKTKAVPQGDGTYKITGQKIWISGGEQDLTDNIIHLVLARIEGAPEGIKGISLFVVPKYMVKED
GSLGERNACQCGGLEEKMGIHGNATCVMNYDGATGWLVGEEHKGMRTMFVMMNEARLGVGLQGMSQAEIAYQNALDFAKD
RVQGRSLTGVQAPDKPADPIIVHPDVRRMLLEQKAFLEGARAFVYWMAFQGDLQHKSPDEAVQQKAEDYMALLTPVVKAY
LTHKGYESANLGLQVHGGSGFTREWGLEQIVRDCRISLIYEGTNGVQALDLVGRKLGANGGRAVFSFFAEIDEFIAENDK
VEGLELYVEGLKTVRAQLQDGTMWLMQNGMSDFNNAGASSHDYLHLMGLTALAFMWARMAKIALEKKDSGDPFYAAKLAT
GRYFVERMLPDAPAHLAKVKTGAAAMMALDAEQF

Sequences:

>Translated_594_residues
MPRYDAPVRDMQFVLHELLQLQNYSNLPGFADASPETIDQILDEGAKFAKNVLFPLNAVGDKQGCKRASDASVKTPDGFP
DAYKQLVENGWPLLSAHPEMGGQGLPHAVNIAWTEMVSSSNMAFGMYPGLTHGAYQALMAGGSDELKAKYGPKMASGEWA
GTMNLTEPHCGTDLGLMKTKAVPQGDGTYKITGQKIWISGGEQDLTDNIIHLVLARIEGAPEGIKGISLFVVPKYMVKED
GSLGERNACQCGGLEEKMGIHGNATCVMNYDGATGWLVGEEHKGMRTMFVMMNEARLGVGLQGMSQAEIAYQNALDFAKD
RVQGRSLTGVQAPDKPADPIIVHPDVRRMLLEQKAFLEGARAFVYWMAFQGDLQHKSPDEAVQQKAEDYMALLTPVVKAY
LTHKGYESANLGLQVHGGSGFTREWGLEQIVRDCRISLIYEGTNGVQALDLVGRKLGANGGRAVFSFFAEIDEFIAENDK
VEGLELYVEGLKTVRAQLQDGTMWLMQNGMSDFNNAGASSHDYLHLMGLTALAFMWARMAKIALEKKDSGDPFYAAKLAT
GRYFVERMLPDAPAHLAKVKTGAAAMMALDAEQF
>Mature_593_residues
PRYDAPVRDMQFVLHELLQLQNYSNLPGFADASPETIDQILDEGAKFAKNVLFPLNAVGDKQGCKRASDASVKTPDGFPD
AYKQLVENGWPLLSAHPEMGGQGLPHAVNIAWTEMVSSSNMAFGMYPGLTHGAYQALMAGGSDELKAKYGPKMASGEWAG
TMNLTEPHCGTDLGLMKTKAVPQGDGTYKITGQKIWISGGEQDLTDNIIHLVLARIEGAPEGIKGISLFVVPKYMVKEDG
SLGERNACQCGGLEEKMGIHGNATCVMNYDGATGWLVGEEHKGMRTMFVMMNEARLGVGLQGMSQAEIAYQNALDFAKDR
VQGRSLTGVQAPDKPADPIIVHPDVRRMLLEQKAFLEGARAFVYWMAFQGDLQHKSPDEAVQQKAEDYMALLTPVVKAYL
THKGYESANLGLQVHGGSGFTREWGLEQIVRDCRISLIYEGTNGVQALDLVGRKLGANGGRAVFSFFAEIDEFIAENDKV
EGLELYVEGLKTVRAQLQDGTMWLMQNGMSDFNNAGASSHDYLHLMGLTALAFMWARMAKIALEKKDSGDPFYAAKLATG
RYFVERMLPDAPAHLAKVKTGAAAMMALDAEQF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=428, Percent_Identity=26.1682242990654, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI4557235, Length=431, Percent_Identity=26.2180974477958, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI76496475, Length=431, Percent_Identity=26.2180974477958, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI21361497, Length=433, Percent_Identity=25.1732101616628, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI4501859, Length=418, Percent_Identity=22.7272727272727, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI7656849, Length=383, Percent_Identity=25.3263707571802, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI226958412, Length=385, Percent_Identity=25.4545454545455, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI226958414, Length=385, Percent_Identity=25.7142857142857, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI4501857, Length=357, Percent_Identity=25.4901960784314, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI87082384, Length=309, Percent_Identity=27.831715210356, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71985184, Length=359, Percent_Identity=26.4623955431755, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=453, Percent_Identity=25.60706401766, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17508101, Length=310, Percent_Identity=27.0967741935484, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=411, Percent_Identity=24.330900243309, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17538396, Length=385, Percent_Identity=24.9350649350649, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17569725, Length=433, Percent_Identity=25.1732101616628, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71985192, Length=261, Percent_Identity=26.0536398467433, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=300, Percent_Identity=25.6666666666667, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24666513, Length=374, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=25.9946949602122, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21355753, Length=392, Percent_Identity=25.5102040816327, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI281363737, Length=391, Percent_Identity=25.8312020460358, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24646207, Length=381, Percent_Identity=23.8845144356955, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64769; Mature: 64638

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRYDAPVRDMQFVLHELLQLQNYSNLPGFADASPETIDQILDEGAKFAKNVLFPLNAVG
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
DKQGCKRASDASVKTPDGFPDAYKQLVENGWPLLSAHPEMGGQGLPHAVNIAWTEMVSSS
CHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEHHHHHHHCCC
NMAFGMYPGLTHGAYQALMAGGSDELKAKYGPKMASGEWAGTMNLTEPHCGTDLGLMKTK
CCEEECCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
AVPQGDGTYKITGQKIWISGGEQDLTDNIIHLVLARIEGAPEGIKGISLFVVPKYMVKED
CCCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCC
GSLGERNACQCGGLEEKMGIHGNATCVMNYDGATGWLVGEEHKGMRTMFVMMNEARLGVG
CCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCEEEECCCCCCCEEEEEEEECHHCCCC
LQGMSQAEIAYQNALDFAKDRVQGRSLTGVQAPDKPADPIIVHPDVRRMLLEQKAFLEGA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHH
RAFVYWMAFQGDLQHKSPDEAVQQKAEDYMALLTPVVKAYLTHKGYESANLGLQVHGGSG
HHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
FTREWGLEQIVRDCRISLIYEGTNGVQALDLVGRKLGANGGRAVFSFFAEIDEFIAENDK
CCHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
VEGLELYVEGLKTVRAQLQDGTMWLMQNGMSDFNNAGASSHDYLHLMGLTALAFMWARMA
CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
KIALEKKDSGDPFYAAKLATGRYFVERMLPDAPAHLAKVKTGAAAMMALDAEQF
HHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHEECCCCC
>Mature Secondary Structure 
PRYDAPVRDMQFVLHELLQLQNYSNLPGFADASPETIDQILDEGAKFAKNVLFPLNAVG
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
DKQGCKRASDASVKTPDGFPDAYKQLVENGWPLLSAHPEMGGQGLPHAVNIAWTEMVSSS
CHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEHHHHHHHCCC
NMAFGMYPGLTHGAYQALMAGGSDELKAKYGPKMASGEWAGTMNLTEPHCGTDLGLMKTK
CCEEECCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
AVPQGDGTYKITGQKIWISGGEQDLTDNIIHLVLARIEGAPEGIKGISLFVVPKYMVKED
CCCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCC
GSLGERNACQCGGLEEKMGIHGNATCVMNYDGATGWLVGEEHKGMRTMFVMMNEARLGVG
CCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCEEEECCCCCCCEEEEEEEECHHCCCC
LQGMSQAEIAYQNALDFAKDRVQGRSLTGVQAPDKPADPIIVHPDVRRMLLEQKAFLEGA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHH
RAFVYWMAFQGDLQHKSPDEAVQQKAEDYMALLTPVVKAYLTHKGYESANLGLQVHGGSG
HHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
FTREWGLEQIVRDCRISLIYEGTNGVQALDLVGRKLGANGGRAVFSFFAEIDEFIAENDK
CCHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
VEGLELYVEGLKTVRAQLQDGTMWLMQNGMSDFNNAGASSHDYLHLMGLTALAFMWARMA
CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
KIALEKKDSGDPFYAAKLATGRYFVERMLPDAPAHLAKVKTGAAAMMALDAEQF
HHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]