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The map label for this gene is yhbH [C]

Identifier: 114800119

GI number: 114800119

Start: 3452401

End: 3452997

Strand: Reverse

Name: yhbH [C]

Synonym: HNE_3290

Alternate gene names: 114800119

Gene position: 3452997-3452401 (Counterclockwise)

Preceding gene: 114797169

Following gene: 114799188

Centisome position: 93.2

GC content: 58.79

Gene sequence:

>597_bases
ATGCAGATTCAGATCACCGGCCGGCATATGGAATTGGGTGAGGCGCTGCGAGGGCGGATCGAAGAGGGGCTGGAAGCGGC
CGTATCCAAATATTTCAGCCGGACGGGCGACGCCAACGTGTTCGTGTCCCAGCAGGGGCCGTTCGTGGAGGTCGATTGCA
ATGTTCACCTGCCATCGGGGATTGTGCTGCAATCATCGGGCAAGGCGAATGATCCCTATGCCGCGCTGGAAGTCAGCCTC
GAAAAAATGGAAAAGCGGGTGCGCCGCTACAAGCGCCGCCTGAAGGATCACCACACCAACGGCCAGGCCGCGCTGCCCGC
CGAGGTGGCGGCCGAAATCCTGATTCAATCCAGAGATGACGAAGCCGAAGATTCGGTCGATACGGGAATGGAGATCGGGG
ACGCTCCCCTGACAGTTGCTGAAACACAGGTTCAGATCCGCACGATGAGCGTTTCTGAGGCAGTTATGCAGCTGGAATTG
CAGGATGTCCCGGCACTCATGTTCAGAAATGCTAGCCATGACGGCCTGAATATGGTCTACCGCCGCCCCGATGGGCATAT
TGGTTGGGTCGACCCCGCCAACACGCCCCGGAATTAA

Upstream 100 bases:

>100_bases
AGATGCGGCGGCTCGTCACGGAAGGGAGTCGCCACTGGCAGGTTCCTGATGCATACTTATCTCTAGGATAGCTCTTAGGT
CACACGCAAAGGAGACGCCC

Downstream 100 bases:

>100_bases
CGCGACGCGCCACGGAAAGTTGTTTGATGGCCACCGATTTGAGTGCTCTGCTGCAAGGCGGAGTGATCATCCCCTTTCAC
GAGGCGACGAGCCGTAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MQIQITGRHMELGEALRGRIEEGLEAAVSKYFSRTGDANVFVSQQGPFVEVDCNVHLPSGIVLQSSGKANDPYAALEVSL
EKMEKRVRRYKRRLKDHHTNGQAALPAEVAAEILIQSRDDEAEDSVDTGMEIGDAPLTVAETQVQIRTMSVSEAVMQLEL
QDVPALMFRNASHDGLNMVYRRPDGHIGWVDPANTPRN

Sequences:

>Translated_198_residues
MQIQITGRHMELGEALRGRIEEGLEAAVSKYFSRTGDANVFVSQQGPFVEVDCNVHLPSGIVLQSSGKANDPYAALEVSL
EKMEKRVRRYKRRLKDHHTNGQAALPAEVAAEILIQSRDDEAEDSVDTGMEIGDAPLTVAETQVQIRTMSVSEAVMQLEL
QDVPALMFRNASHDGLNMVYRRPDGHIGWVDPANTPRN
>Mature_198_residues
MQIQITGRHMELGEALRGRIEEGLEAAVSKYFSRTGDANVFVSQQGPFVEVDCNVHLPSGIVLQSSGKANDPYAALEVSL
EKMEKRVRRYKRRLKDHHTNGQAALPAEVAAEILIQSRDDEAEDSVDTGMEIGDAPLTVAETQVQIRTMSVSEAVMQLEL
QDVPALMFRNASHDGLNMVYRRPDGHIGWVDPANTPRN

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21924; Mature: 21924

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQITGRHMELGEALRGRIEEGLEAAVSKYFSRTGDANVFVSQQGPFVEVDCNVHLPSG
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCC
IVLQSSGKANDPYAALEVSLEKMEKRVRRYKRRLKDHHTNGQAALPAEVAAEILIQSRDD
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
EAEDSVDTGMEIGDAPLTVAETQVQIRTMSVSEAVMQLELQDVPALMFRNASHDGLNMVY
CCHHHHHCCCCCCCCCEEEEECEEEEEEHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEE
RRPDGHIGWVDPANTPRN
ECCCCCEECCCCCCCCCC
>Mature Secondary Structure
MQIQITGRHMELGEALRGRIEEGLEAAVSKYFSRTGDANVFVSQQGPFVEVDCNVHLPSG
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCC
IVLQSSGKANDPYAALEVSLEKMEKRVRRYKRRLKDHHTNGQAALPAEVAAEILIQSRDD
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC
EAEDSVDTGMEIGDAPLTVAETQVQIRTMSVSEAVMQLELQDVPALMFRNASHDGLNMVY
CCHHHHHCCCCCCCCCEEEEECEEEEEEHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEE
RRPDGHIGWVDPANTPRN
ECCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 3034856 [H]