The gene/protein map for NC_008358 is currently unavailable.
Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114800111

Identifier: 114800111

GI number: 114800111

Start: 3438916

End: 3440067

Strand: Reverse

Name: 114800111

Synonym: HNE_3277

Alternate gene names: NA

Gene position: 3440067-3438916 (Counterclockwise)

Preceding gene: 114797081

Following gene: 114797186

Centisome position: 92.85

GC content: 65.19

Gene sequence:

>1152_bases
ATGCAAACCACGCTTGCACTGCTTCAGCCGCTTCTTCCCGAGCTCGCCGCCCGCGCGGGAGATATGGAGGCGGCGCGGCG
CCTTCCGGCAGACCTTGCGCAAAAGCTTGCCGCTGCCGGTGTTTTCCGGATGGTGACGCCCAGGACCTTTGGCGGACTTG
AGCTCAGCCCGCGCGAGATTGTCGAGGTCACCGAAGCGGCCGCCCGCGCCAATGCCAGCGCCGGATGGTGCGTGATGATC
GCCGCAACCACGGCGCTCAACGCCGCTTATATGGCGCCCGAATATGCCCGCGAAATCTACGCCGATCCGTTGACAATCAC
CGGCGGCGTTTTTGCGCCAATGGGCAAGGCGGTGGTGGAGGGGGATCACTACCGCGTTTCCGGCCGCTGGCAGTGGGGCT
CGGGCTCGGCCAATTGCAGCTGGCTCTGCGGGGGTTGCACCGTCTGGGAAGCGGACGAGATGAAGCGGTTGCCCAGCGGC
GCGCCCGACACGCGGATGATGGTCTTTCCCGCTTCCGAAGTGACCCTGCATGACACCTGGCATGTGATGGGCCTGAAGGG
CACAGGCTCGGGCGACATTGAAGTGAAGGACATTCTGGTGCCGCGCGGGCGCTCGGTATCGCTGGTGGCCGATGCGCCGC
GCGAATCCGGGGCGTTGTTCAAATTCCCCGCCTTTGGTCTGCTGGCGCTGGGCGTTTCGGCCGTCGCGCTTGGCAATGCG
CGTGGCGCGCTGGACGCGTTTCACGCCCTCGCCACAGTTAAGAAAAGCCAGGGATCATCCAAGACGCTCAGCGAGCGCCA
GGCCATGCAGGCAGACTATGCCCGCTGTGAAGCCCAATGGCGCGCCGCGCGGGCTTATCTTTTTGCAGAGATCGACCGTG
TCTGGACAATTGCGCAGGGCGATGGCGCCATTCCGATGGAGGCGCGCGCTGATCTGCGCCTGGCGTGTACCCATATGACC
CGCACCGGCGCCGACATCTGCCGCACGTTGTATGATCTGGGCGGGGGCGCCGCCCTGTTTGAGGCCAGCGACCTGCAACG
CCGCTTCCGCGATGCTCATGCCATCACCCAGCATATCGTCACCGCCCCCTCTACGCTGGAACTGACGGGACGCATTCTCT
TTGGGCTGCCGACCGATGGCGCCATGGTGTGA

Upstream 100 bases:

>100_bases
TGACGATAGACCCCGCTTCCATGCGCGATATTCGCATCCTTGAAACCATCAAGGAAGGCGTCACCATCTACAGCGCTGAA
TTGCCCGAGGACAAATGACC

Downstream 100 bases:

>100_bases
GCATTCTGGCGGGAAGCCGGTTTTTGTGGCATCCTGCTGAAAAGTGCGCGGAGGAGACGGGAGGATCTGCCGATGCAAAG
CGCCGTGGCGTTTGGAGGGT

Product: putative hydrolase NrgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MQTTLALLQPLLPELAARAGDMEAARRLPADLAQKLAAAGVFRMVTPRTFGGLELSPREIVEVTEAAARANASAGWCVMI
AATTALNAAYMAPEYAREIYADPLTITGGVFAPMGKAVVEGDHYRVSGRWQWGSGSANCSWLCGGCTVWEADEMKRLPSG
APDTRMMVFPASEVTLHDTWHVMGLKGTGSGDIEVKDILVPRGRSVSLVADAPRESGALFKFPAFGLLALGVSAVALGNA
RGALDAFHALATVKKSQGSSKTLSERQAMQADYARCEAQWRAARAYLFAEIDRVWTIAQGDGAIPMEARADLRLACTHMT
RTGADICRTLYDLGGGAALFEASDLQRRFRDAHAITQHIVTAPSTLELTGRILFGLPTDGAMV

Sequences:

>Translated_383_residues
MQTTLALLQPLLPELAARAGDMEAARRLPADLAQKLAAAGVFRMVTPRTFGGLELSPREIVEVTEAAARANASAGWCVMI
AATTALNAAYMAPEYAREIYADPLTITGGVFAPMGKAVVEGDHYRVSGRWQWGSGSANCSWLCGGCTVWEADEMKRLPSG
APDTRMMVFPASEVTLHDTWHVMGLKGTGSGDIEVKDILVPRGRSVSLVADAPRESGALFKFPAFGLLALGVSAVALGNA
RGALDAFHALATVKKSQGSSKTLSERQAMQADYARCEAQWRAARAYLFAEIDRVWTIAQGDGAIPMEARADLRLACTHMT
RTGADICRTLYDLGGGAALFEASDLQRRFRDAHAITQHIVTAPSTLELTGRILFGLPTDGAMV
>Mature_383_residues
MQTTLALLQPLLPELAARAGDMEAARRLPADLAQKLAAAGVFRMVTPRTFGGLELSPREIVEVTEAAARANASAGWCVMI
AATTALNAAYMAPEYAREIYADPLTITGGVFAPMGKAVVEGDHYRVSGRWQWGSGSANCSWLCGGCTVWEADEMKRLPSG
APDTRMMVFPASEVTLHDTWHVMGLKGTGSGDIEVKDILVPRGRSVSLVADAPRESGALFKFPAFGLLALGVSAVALGNA
RGALDAFHALATVKKSQGSSKTLSERQAMQADYARCEAQWRAARAYLFAEIDRVWTIAQGDGAIPMEARADLRLACTHMT
RTGADICRTLYDLGGGAALFEASDLQRRFRDAHAITQHIVTAPSTLELTGRILFGLPTDGAMV

Specific function: Involved in pigment production acting as an hydroxylase that transforms indole to indoxyl, resulting in the formation of indigo [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2 [H]

EC number: NA

Molecular weight: Translated: 40899; Mature: 40899

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTTLALLQPLLPELAARAGDMEAARRLPADLAQKLAAAGVFRMVTPRTFGGLELSPREI
CCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHEEECCCCCCCCCCCHHHH
VEVTEAAARANASAGWCVMIAATTALNAAYMAPEYAREIYADPLTITGGVFAPMGKAVVE
HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHCCHHHHHHHHCCCEEECCCCHHCCCHHHCC
GDHYRVSGRWQWGSGSANCSWLCGGCTVWEADEMKRLPSGAPDTRMMVFPASEVTLHDTW
CCEEEEEEEEECCCCCCCCEEEECCCEEECCHHHHHCCCCCCCCEEEEEECCCEEEECCE
HVMGLKGTGSGDIEVKDILVPRGRSVSLVADAPRESGALFKFPAFGLLALGVSAVALGNA
EEEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHEECCC
RGALDAFHALATVKKSQGSSKTLSERQAMQADYARCEAQWRAARAYLFAEIDRVWTIAQG
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHEEEEECC
DGAIPMEARADLRLACTHMTRTGADICRTLYDLGGGAALFEASDLQRRFRDAHAITQHIV
CCCCCCCCCCCEEEEEEHHHHCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
TAPSTLELTGRILFGLPTDGAMV
CCCCEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MQTTLALLQPLLPELAARAGDMEAARRLPADLAQKLAAAGVFRMVTPRTFGGLELSPREI
CCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHEEECCCCCCCCCCCHHHH
VEVTEAAARANASAGWCVMIAATTALNAAYMAPEYAREIYADPLTITGGVFAPMGKAVVE
HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHCCHHHHHHHHCCCEEECCCCHHCCCHHHCC
GDHYRVSGRWQWGSGSANCSWLCGGCTVWEADEMKRLPSGAPDTRMMVFPASEVTLHDTW
CCEEEEEEEEECCCCCCCCEEEECCCEEECCHHHHHCCCCCCCCEEEEEECCCEEEECCE
HVMGLKGTGSGDIEVKDILVPRGRSVSLVADAPRESGALFKFPAFGLLALGVSAVALGNA
EEEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHEECCC
RGALDAFHALATVKKSQGSSKTLSERQAMQADYARCEAQWRAARAYLFAEIDRVWTIAQG
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHEEEEECC
DGAIPMEARADLRLACTHMTRTGADICRTLYDLGGGAALFEASDLQRRFRDAHAITQHIV
CCCCCCCCCCCEEEEEEHHHHCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
TAPSTLELTGRILFGLPTDGAMV
CCCCEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9251216 [H]