| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114800068
Identifier: 114800068
GI number: 114800068
Start: 931305
End: 932672
Strand: Reverse
Name: 114800068
Synonym: HNE_0915
Alternate gene names: NA
Gene position: 932672-931305 (Counterclockwise)
Preceding gene: 114797272
Following gene: 114797637
Centisome position: 25.17
GC content: 60.6
Gene sequence:
>1368_bases ATGGTCTGGTATACCGACCTTCGGAACCGCAAGTTTTTTTCTGAATCGGAGGCCGACTGGACCTCTCGCCGCCTGCTGGA GCTGCGCGCGCAGCTCGCCTCGCCCCCGCCCAAGGGCGTGCCGCGCCGGACGAAAGATTCCAGCATCATCATCGGCACCT GGAACATCCGGGATTTCGACAATAACAAATTCCGCCATGGGCCGCGCCGCCGAGAGAGCCTGCATTATATTGCTGAGGTG CTGTCTGCGTTTGACGTCTGCGCGTTGCAGGAGGTGAACGAGGACCTCGGGCCGCTCAAGGATGTGATCCGCCTGATGGG GCCGGGCTGGGATTTTATTGCGACGGATGTGACGACCGGGGCGAGTGGCAACCGGGAGCGGATGTGCTTTGTGTATGACA GCCGGAAAGTCCGCTTCCGGAATATTGTGGGCGAGATTGTTTTGCCCAAGCATGCCCTGTTGCCAGGCGAGCAGCAGTTT GCGCGCACGCCCTTTATGGTGAGCTTTCAGGCGGGGTGGTTCAAGTTTTCGCTGTGTACGGTGCATATCTATTTCGGGGA GACCTCGAAGGGAAGCGACGGGTATGCGCGGCGGGTGTCGGAGATCGACTATATCGCGCGCGAGATGGCCGACCGGGCCG AGCGGGAGAATGAGAACTACATTCTGCTGGGCGATTTCAACATCAAGAACCCCGTCGACGAGACAATGAGCGCGCTGACC AAGGCGGGGTTTCAGTTGCCGCCGGAGCAGTATCCGTCAAACCTGTTGGGGACGCATTATTACGATCAGATCGCCTTCCG CACCCTGAAGGATGAGCTGACATTCCTGTCCTCCGGTGTGTTCGACTGGAGCCAGACGGTGTTTCATGCCGATCATTACG AGCATTACGCCCCTGTGCTGCCCGCGCGACACCGCGACCTGAAGCCTGATGGGCGGCCCCGCGATACCGGAAAGGACAAG GAATACTATTCCAAACGCTGGCTGACCTGGCAGATGTCTGACCATTTGCCGCTGTGGGTGGAGCTGGCGATCGACTTTTC CGATGCGCATCTGCTGCACAATGTGAAGGGCGAGTTTGAGCGCGGCGATGTGCCCGCGCAGGTGGAGTTTACCGAAGAGG AAGCGCCGGTGGAAAGCCCGCCGGAGCCGGCAGAGCCCGTCCGTCCTCTGAAGAAGAAGCGCAAGGCGCCGAAGGTGGCC GCGCCCGAGAAGCAGGGCACGCTGGCGCCGACACGGAAGATGAGCTTTGCTGAAGGCTGGCGGATATTCTGGTGGGTGGC GATGGGTGGCGGCGACCGGATGCGCAAGGCGAAGGAGGCAGGCAAGAAGGCCGCAAAGCCGCGCAAGGCCAAGAAAACAA AAGGCTAG
Upstream 100 bases:
>100_bases AGCCCCCTCCCCTGCTGGGAAAAGTTTCCAGTTTGTTAACCCCTCGCTAACCAAACTTTAAGAGACCCTAACCAGCCGCA GAATGCGATGGGGGACAGCC
Downstream 100 bases:
>100_bases AGCGCGGCGAGCAGGGTTTCCGCCGCGGCCCAGAGGGGCTCGGTTGCCTTGACGATGACCGGATGATGGGGCGAGCGCTC CATACCGGGCACGGAGGTTC
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MVWYTDLRNRKFFSESEADWTSRRLLELRAQLASPPPKGVPRRTKDSSIIIGTWNIRDFDNNKFRHGPRRRESLHYIAEV LSAFDVCALQEVNEDLGPLKDVIRLMGPGWDFIATDVTTGASGNRERMCFVYDSRKVRFRNIVGEIVLPKHALLPGEQQF ARTPFMVSFQAGWFKFSLCTVHIYFGETSKGSDGYARRVSEIDYIAREMADRAERENENYILLGDFNIKNPVDETMSALT KAGFQLPPEQYPSNLLGTHYYDQIAFRTLKDELTFLSSGVFDWSQTVFHADHYEHYAPVLPARHRDLKPDGRPRDTGKDK EYYSKRWLTWQMSDHLPLWVELAIDFSDAHLLHNVKGEFERGDVPAQVEFTEEEAPVESPPEPAEPVRPLKKKRKAPKVA APEKQGTLAPTRKMSFAEGWRIFWWVAMGGGDRMRKAKEAGKKAAKPRKAKKTKG
Sequences:
>Translated_455_residues MVWYTDLRNRKFFSESEADWTSRRLLELRAQLASPPPKGVPRRTKDSSIIIGTWNIRDFDNNKFRHGPRRRESLHYIAEV LSAFDVCALQEVNEDLGPLKDVIRLMGPGWDFIATDVTTGASGNRERMCFVYDSRKVRFRNIVGEIVLPKHALLPGEQQF ARTPFMVSFQAGWFKFSLCTVHIYFGETSKGSDGYARRVSEIDYIAREMADRAERENENYILLGDFNIKNPVDETMSALT KAGFQLPPEQYPSNLLGTHYYDQIAFRTLKDELTFLSSGVFDWSQTVFHADHYEHYAPVLPARHRDLKPDGRPRDTGKDK EYYSKRWLTWQMSDHLPLWVELAIDFSDAHLLHNVKGEFERGDVPAQVEFTEEEAPVESPPEPAEPVRPLKKKRKAPKVA APEKQGTLAPTRKMSFAEGWRIFWWVAMGGGDRMRKAKEAGKKAAKPRKAKKTKG >Mature_455_residues MVWYTDLRNRKFFSESEADWTSRRLLELRAQLASPPPKGVPRRTKDSSIIIGTWNIRDFDNNKFRHGPRRRESLHYIAEV LSAFDVCALQEVNEDLGPLKDVIRLMGPGWDFIATDVTTGASGNRERMCFVYDSRKVRFRNIVGEIVLPKHALLPGEQQF ARTPFMVSFQAGWFKFSLCTVHIYFGETSKGSDGYARRVSEIDYIAREMADRAERENENYILLGDFNIKNPVDETMSALT KAGFQLPPEQYPSNLLGTHYYDQIAFRTLKDELTFLSSGVFDWSQTVFHADHYEHYAPVLPARHRDLKPDGRPRDTGKDK EYYSKRWLTWQMSDHLPLWVELAIDFSDAHLLHNVKGEFERGDVPAQVEFTEEEAPVESPPEPAEPVRPLKKKRKAPKVA APEKQGTLAPTRKMSFAEGWRIFWWVAMGGGDRMRKAKEAGKKAAKPRKAKKTKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52345; Mature: 52345
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWYTDLRNRKFFSESEADWTSRRLLELRAQLASPPPKGVPRRTKDSSIIIGTWNIRDFD CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCC NNKFRHGPRRRESLHYIAEVLSAFDVCALQEVNEDLGPLKDVIRLMGPGWDFIATDVTTG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEECC ASGNRERMCFVYDSRKVRFRNIVGEIVLPKHALLPGEQQFARTPFMVSFQAGWFKFSLCT CCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHCCCCHHHHHCCCEEEEEECCCEEEEEEE VHIYFGETSKGSDGYARRVSEIDYIAREMADRAERENENYILLGDFNIKNPVDETMSALT EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH KAGFQLPPEQYPSNLLGTHYYDQIAFRTLKDELTFLSSGVFDWSQTVFHADHYEHYAPVL HCCCCCCHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCC PARHRDLKPDGRPRDTGKDKEYYSKRWLTWQMSDHLPLWVELAIDFSDAHLLHNVKGEFE CCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCEEEEEEEECCHHHHHHHCCCCCC RGDVPAQVEFTEEEAPVESPPEPAEPVRPLKKKRKAPKVAAPEKQGTLAPTRKMSFAEGW CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHHCCC RIFWWVAMGGGDRMRKAKEAGKKAAKPRKAKKTKG EEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVWYTDLRNRKFFSESEADWTSRRLLELRAQLASPPPKGVPRRTKDSSIIIGTWNIRDFD CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCC NNKFRHGPRRRESLHYIAEVLSAFDVCALQEVNEDLGPLKDVIRLMGPGWDFIATDVTTG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEECC ASGNRERMCFVYDSRKVRFRNIVGEIVLPKHALLPGEQQFARTPFMVSFQAGWFKFSLCT CCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHCCCCHHHHHCCCEEEEEECCCEEEEEEE VHIYFGETSKGSDGYARRVSEIDYIAREMADRAERENENYILLGDFNIKNPVDETMSALT EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH KAGFQLPPEQYPSNLLGTHYYDQIAFRTLKDELTFLSSGVFDWSQTVFHADHYEHYAPVL HCCCCCCHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCC PARHRDLKPDGRPRDTGKDKEYYSKRWLTWQMSDHLPLWVELAIDFSDAHLLHNVKGEFE CCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEECCCCCEEEEEEEECCHHHHHHHCCCCCC RGDVPAQVEFTEEEAPVESPPEPAEPVRPLKKKRKAPKVAAPEKQGTLAPTRKMSFAEGW CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCHHHCCC RIFWWVAMGGGDRMRKAKEAGKKAAKPRKAKKTKG EEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA