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The map label for this gene is cycY [H]

Identifier: 114797637

GI number: 114797637

Start: 927397

End: 927954

Strand: Reverse

Name: cycY [H]

Synonym: HNE_0912

Alternate gene names: 114797637

Gene position: 927954-927397 (Counterclockwise)

Preceding gene: 114800068

Following gene: 114798468

Centisome position: 25.05

GC content: 68.64

Gene sequence:

>558_bases
ATGCGCTTTTCCGCTGCTGCTCCGCTCGCCCTGATTGCTGCGCTCGCCCTGGCGGGCTGTGGCGGCGCTGACCCGGCGCC
CGCCGCGCCGGCTGAACCCAGCGCTCAGGAGGCCCCGGCCACCCCTGCACCCGTGCCCGCCACACCTGCCGTGGCGCCCG
GCGAGCCGAGCCCGGAATTTGCGAACCTGCCCGCGCCTTACAACACCGCCAACTATGCCGTGGGCGCGCGGACCTGGAAG
CTCTGCCAGTCCTGCCACCTTACCGCAGAAGGGGCGGGCAACCTCGTTGGCCCCAACCTGCACGGCATTTTCAGCCGCCA
GGTGGCGACGGTGGAAGGCTTTGCCTATTCGCCCGCGCTGTCGGCAGAGACGTTCATGTGGACGCCTGAGCAGCTGGATC
ACTGGCTGGAAAATCCCCGCACCTTTGTGCCGGGCAACCGGATGAGCTTTTCCGGCGTGCGCAGGGAAGCCGACCGGCTG
GGCGTGATTGCCTATCTGATGGTCGAGACGGGGTATGAAGGCGAGGCCGCCCCGGCAGAGGAAGCCCCGGCGGAATAA

Upstream 100 bases:

>100_bases
TAAATTTTGCCTCTGCGGCAGGCTGGCAGTTGAGTTTGGCGGGCAGGAGCGCAAAGATGGTGGCCGACAGTTCCTGACCC
ATACAAGGTGTTGATACCCC

Downstream 100 bases:

>100_bases
ATCGCCTAGCGCTTGGCGACGATCGCAATCAGGACGGCATTTTCATTGAAGGTGCCGCCGATTTCTTCGCGGTAGCCGAC
CGAGACATCGACGCGGCCGA

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRFSAAAPLALIAALALAGCGGADPAPAAPAEPSAQEAPATPAPVPATPAVAPGEPSPEFANLPAPYNTANYAVGARTWK
LCQSCHLTAEGAGNLVGPNLHGIFSRQVATVEGFAYSPALSAETFMWTPEQLDHWLENPRTFVPGNRMSFSGVRREADRL
GVIAYLMVETGYEGEAAPAEEAPAE

Sequences:

>Translated_185_residues
MRFSAAAPLALIAALALAGCGGADPAPAAPAEPSAQEAPATPAPVPATPAVAPGEPSPEFANLPAPYNTANYAVGARTWK
LCQSCHLTAEGAGNLVGPNLHGIFSRQVATVEGFAYSPALSAETFMWTPEQLDHWLENPRTFVPGNRMSFSGVRREADRL
GVIAYLMVETGYEGEAAPAEEAPAE
>Mature_185_residues
MRFSAAAPLALIAALALAGCGGADPAPAAPAEPSAQEAPATPAPVPATPAVAPGEPSPEFANLPAPYNTANYAVGARTWK
LCQSCHLTAEGAGNLVGPNLHGIFSRQVATVEGFAYSPALSAETFMWTPEQLDHWLENPRTFVPGNRMSFSGVRREADRL
GVIAYLMVETGYEGEAAPAEEAPAE

Specific function: Electron transfer pathways that operates during photosynthesis [H]

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI11128019, Length=85, Percent_Identity=36.4705882352941, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17539604, Length=112, Percent_Identity=33.9285714285714, Blast_Score=81, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17566554, Length=96, Percent_Identity=31.25, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320796, Length=85, Percent_Identity=41.1764705882353, Blast_Score=95, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6322508, Length=85, Percent_Identity=38.8235294117647, Blast_Score=88, Evalue=6e-19,
Organism=Drosophila melanogaster, GI17137228, Length=89, Percent_Identity=39.3258426966292, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI17137204, Length=85, Percent_Identity=35.2941176470588, Blast_Score=77, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 19172; Mature: 19172

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSAAAPLALIAALALAGCGGADPAPAAPAEPSAQEAPATPAPVPATPAVAPGEPSPEF
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ANLPAPYNTANYAVGARTWKLCQSCHLTAEGAGNLVGPNLHGIFSRQVATVEGFAYSPAL
CCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCC
SAETFMWTPEQLDHWLENPRTFVPGNRMSFSGVRREADRLGVIAYLMVETGYEGEAAPAE
CCCEEEECHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCC
EAPAE
CCCCC
>Mature Secondary Structure
MRFSAAAPLALIAALALAGCGGADPAPAAPAEPSAQEAPATPAPVPATPAVAPGEPSPEF
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ANLPAPYNTANYAVGARTWKLCQSCHLTAEGAGNLVGPNLHGIFSRQVATVEGFAYSPAL
CCCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCC
SAETFMWTPEQLDHWLENPRTFVPGNRMSFSGVRREADRLGVIAYLMVETGYEGEAAPAE
CCCEEEECHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCC
EAPAE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8385603 [H]