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The map label for this gene is flgF [H]

Identifier: 114799934

GI number: 114799934

Start: 246167

End: 246883

Strand: Direct

Name: flgF [H]

Synonym: HNE_0255

Alternate gene names: 114799934

Gene position: 246167-246883 (Clockwise)

Preceding gene: 114798160

Following gene: 114799186

Centisome position: 6.64

GC content: 59.27

Gene sequence:

>717_bases
ATGTCGAGCCCCATTTACACGACACTCGCCCGCCAGCAGGGCCTGATGCAGGAAATGCAGGTCGTCGCGAACAATCTCGC
AAATTCCAGCACGACCGGCTACAAATCTGATCGGGCCATCTTCACGGAGTTCCTCGTCTCCACCGGAGACTCGCCGGATC
AGTCGCTCTCGATGGGCGGTCTGGGCGGGCATGCCTTTCAGCTTGAGCAAGGTGGCCTGAACTTTACGGGTGGCCGGTTT
GATCTGGCGATCCAGGGCGAAGGTTTCTTCATGGTGGAAACGCCGCAGGGCGAACGCCTCACACGCGCCGGGCATTTCCA
GCTTTCAGGCGCAGGACAGCTTGTCGACATGCAAGGCAATCCGGTTCTCAGCGCGGGCGGAAATCCCATCACCATTCCCG
ACGATGCGACAGATGTGAGTTTTGGCGAGGACGGCACAATCTCCGGCAACGGACAGATCATTGATCAGGTTGGCATCATG
CTCGCCGACGGCCAGCTTACCAGGGATTCCAACACCTATTTTGCTGCCGAAGGCGGCGTGGCGCCGACCCAGGACGCAAA
ACTGGTCCAGGGCGCGCTTGAACAATCGAATGTGTCACCGGTGCTGGAAGTGTCCCGGATGATTGAAGTGCAGCGCGCGT
ATGAGGCGGGTCAGGCACTTCTTGAAAAGGAGGACCAGCGCATCAGCCAGCTGATCACAGCTGTGCGGGAACGTTGA

Upstream 100 bases:

>100_bases
GCGGCGTGGCTGAACCATCACCGACCAGTATCGCCGGTGTTCCAGACCGCCTGATGACGACACGGATGGCACTGGATTCT
CTCGAGGGAGGGAGCAACTG

Downstream 100 bases:

>100_bases
ACCGTTTTACCAGGTGTAGGAGACGCCTATGAAGTCATTGCAGATTGCCGCGTCCGGTATGGCAGCCCAGCAAATGCGGG
TGGAAGTCATCTCGAACAAC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSSPIYTTLARQQGLMQEMQVVANNLANSSTTGYKSDRAIFTEFLVSTGDSPDQSLSMGGLGGHAFQLEQGGLNFTGGRF
DLAIQGEGFFMVETPQGERLTRAGHFQLSGAGQLVDMQGNPVLSAGGNPITIPDDATDVSFGEDGTISGNGQIIDQVGIM
LADGQLTRDSNTYFAAEGGVAPTQDAKLVQGALEQSNVSPVLEVSRMIEVQRAYEAGQALLEKEDQRISQLITAVRER

Sequences:

>Translated_238_residues
MSSPIYTTLARQQGLMQEMQVVANNLANSSTTGYKSDRAIFTEFLVSTGDSPDQSLSMGGLGGHAFQLEQGGLNFTGGRF
DLAIQGEGFFMVETPQGERLTRAGHFQLSGAGQLVDMQGNPVLSAGGNPITIPDDATDVSFGEDGTISGNGQIIDQVGIM
LADGQLTRDSNTYFAAEGGVAPTQDAKLVQGALEQSNVSPVLEVSRMIEVQRAYEAGQALLEKEDQRISQLITAVRER
>Mature_237_residues
SSPIYTTLARQQGLMQEMQVVANNLANSSTTGYKSDRAIFTEFLVSTGDSPDQSLSMGGLGGHAFQLEQGGLNFTGGRFD
LAIQGEGFFMVETPQGERLTRAGHFQLSGAGQLVDMQGNPVLSAGGNPITIPDDATDVSFGEDGTISGNGQIIDQVGIML
ADGQLTRDSNTYFAAEGGVAPTQDAKLVQGALEQSNVSPVLEVSRMIEVQRAYEAGQALLEKEDQRISQLITAVRER

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=243, Percent_Identity=36.2139917695473, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1787317, Length=256, Percent_Identity=28.90625, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25279; Mature: 25148

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPIYTTLARQQGLMQEMQVVANNLANSSTTGYKSDRAIFTEFLVSTGDSPDQSLSMGG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCC
LGGHAFQLEQGGLNFTGGRFDLAIQGEGFFMVETPQGERLTRAGHFQLSGAGQLVDMQGN
CCCEEEEEECCCCEECCCEEEEEEECCCEEEEECCCCCCEEECCCEEECCCCEEEEECCC
PVLSAGGNPITIPDDATDVSFGEDGTISGNGQIIDQVGIMLADGQLTRDSNTYFAAEGGV
EEEECCCCEEECCCCCCCCCCCCCCEECCCCEEEEEECEEEECCEEECCCCEEEEECCCC
APTQDAKLVQGALEQSNVSPVLEVSRMIEVQRAYEAGQALLEKEDQRISQLITAVRER
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSPIYTTLARQQGLMQEMQVVANNLANSSTTGYKSDRAIFTEFLVSTGDSPDQSLSMGG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEECCC
LGGHAFQLEQGGLNFTGGRFDLAIQGEGFFMVETPQGERLTRAGHFQLSGAGQLVDMQGN
CCCEEEEEECCCCEECCCEEEEEEECCCEEEEECCCCCCEEECCCEEECCCCEEEEECCC
PVLSAGGNPITIPDDATDVSFGEDGTISGNGQIIDQVGIMLADGQLTRDSNTYFAAEGGV
EEEECCCCEEECCCCCCCCCCCCCCEECCCCEEEEEECEEEECCEEECCCCEEEEECCCC
APTQDAKLVQGALEQSNVSPVLEVSRMIEVQRAYEAGQALLEKEDQRISQLITAVRER
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1474584; 11259647 [H]