Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798160

Identifier: 114798160

GI number: 114798160

Start: 244404

End: 246167

Strand: Direct

Name: 114798160

Synonym: HNE_0254

Alternate gene names: NA

Gene position: 244404-246167 (Clockwise)

Preceding gene: 114797426

Following gene: 114799934

Centisome position: 6.6

GC content: 59.47

Gene sequence:

>1764_bases
ATGAGGCGTTACCTCTGGCTTCTCCTTTGTGGCGCGCTCCTGGCTCCGCCCGTCCTTGCCGCCAAACCGGAGGCAGAGAC
GGCGGGGCCAGACGCGCGAAAGCAGGAGCTGTCGACCGAGCTCAACCAGTTTGTTCGCGATGCCATCGATGAGGGCCTTC
TCGCGCCATCAGGATCGGGCGCCGCTGCCGAACCGATGGAGCCGTCTGCCGAAGTAGAGACCGTGGAGCGCGGCGTGGAT
GCAGCGCCAACAGCACCGTCCGACGTCTGGGCGTTATCTGGCCCGATGGATTGCAATGCGCCTTACCCGCTCGACTTTTC
AGAGTTCGAAGCCATCGCAAGCTATTCGGACATCCTGAACTACCGCACCCAGCTGATGGCGGACGGTGTTTCGGCGACAG
ACGACCCTCGGTTGGCGAAGGCATACATTGCGCTCGACATGGCGTCTGAGGCGGTGATGAATCTCAGCGATCCAACCAAG
CCGAATGAGCAGGCGCTGTATCATGTTGCGCAATTGCTCGACGGCCGTATCCGTCCGGATCTGACGTACTTTCAGGCACT
CGCGCAGTGCCATGAGAAGGCCGAGCTGTGGCTCGGGATCGCTCTGCTGATTGATGGGCAAGGTACCGGCGCAGCTTATA
TTGATAAGAGATTCAATGCCTTCCGCGAACTGCCATTGCAGTTGCGCACGAGTGTTACCGCAATCGCTGTTCCAGCTCTG
GACCGCACTGATGGGCGGTTTCTGTCTCAGAAGATGCTGGCGTCCTTCGGCGAGGCGGAACTGCGCGATTCCGCTCAGCT
CCAGTTTGCCAATGCCATCCTGGAAATGGGGCAGGGGAACACGCAGGCAGAGATCCTGATCCGCACTTTCCTTCTGCAAG
GCCGGTTCCAGGAGGAAGCCCTCTTTGCACTGATAAGACATCACCGCGTCATCGATGCGCCCGTCAAAGCATTGCTGCTC
GATGGCATGTTGTTCAAGATCGAACAGTCTCAGCGTGACGAAGATATTCGCGCGAGCATGAAGTTTGTGCTCGATGAGCT
CAGCGCCGAGTCCCGCTATCTGACCATGATGGACATGGCCGGGCGCGACAACATGCAGAGCGAAGCGGCCCAAAGCGAAA
TCCGGATTTATTTCGTGACCGGCCTGCAGCGCGATCTAGCAAGTGACGACCCGCTTCACAATCTGGCAGCCATTGAAGCG
CTGTCGATCGAGGCCGGTCTTCTCGATCATCATGAGCAGCGTAAAGCGCTCTATGAGGCCGCGACCCTGAAGGCGGTGCG
TCTTGGTTTCGCATCACTCGCCGACGAGCTTTCCCGGAAAACGCAGCCTGGTGAGGCCGTTGCCGAACAGCGCGCGACCC
TTGCTTATCGTCTCAAGGATTATCCTGCCGTTTTCCAGCTAGCCGACGCCAATCCGTCGAACATCCAGATCGGATTGGTG
GCCGCCCTCAGCGCTATTGACGCGAATGACGCCGCGCAGCTTCAACTCTTCACCTCCCGCCTCAAGCTTGATGATGCGAC
GATCCTTGCACTGATTGAGCAGGACGCGGCCAGCCAGCGCTGGATCGTGCCCAACGCCGTCTATCAGGCAGCGGGGGCTA
TAACAGACGAGGCAAGTAAAGCACGGGCAGACCGTGTTCTTGGCTTGAAGCAGGCCGCAGCCAGCGGCGTGGCTGAACCA
TCACCGACCAGTATCGCCGGTGTTCCAGACCGCCTGATGACGACACGGATGGCACTGGATTCTCTCGAGGGAGGGAGCAA
CTGA

Upstream 100 bases:

>100_bases
TCAACATCTGTGTTGAGGTTGCCCGCCGTCAGGCGCCGGCGCGGGTCCGTCCGTCCTTTGATGAGGTCGAGCAAGCGGTT
AGGGGGCTCAAGCAGGCAGC

Downstream 100 bases:

>100_bases
TGTCGAGCCCCATTTACACGACACTCGCCCGCCAGCAGGGCCTGATGCAGGAAATGCAGGTCGTCGCGAACAATCTCGCA
AATTCCAGCACGACCGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MRRYLWLLLCGALLAPPVLAAKPEAETAGPDARKQELSTELNQFVRDAIDEGLLAPSGSGAAAEPMEPSAEVETVERGVD
AAPTAPSDVWALSGPMDCNAPYPLDFSEFEAIASYSDILNYRTQLMADGVSATDDPRLAKAYIALDMASEAVMNLSDPTK
PNEQALYHVAQLLDGRIRPDLTYFQALAQCHEKAELWLGIALLIDGQGTGAAYIDKRFNAFRELPLQLRTSVTAIAVPAL
DRTDGRFLSQKMLASFGEAELRDSAQLQFANAILEMGQGNTQAEILIRTFLLQGRFQEEALFALIRHHRVIDAPVKALLL
DGMLFKIEQSQRDEDIRASMKFVLDELSAESRYLTMMDMAGRDNMQSEAAQSEIRIYFVTGLQRDLASDDPLHNLAAIEA
LSIEAGLLDHHEQRKALYEAATLKAVRLGFASLADELSRKTQPGEAVAEQRATLAYRLKDYPAVFQLADANPSNIQIGLV
AALSAIDANDAAQLQLFTSRLKLDDATILALIEQDAASQRWIVPNAVYQAAGAITDEASKARADRVLGLKQAAASGVAEP
SPTSIAGVPDRLMTTRMALDSLEGGSN

Sequences:

>Translated_587_residues
MRRYLWLLLCGALLAPPVLAAKPEAETAGPDARKQELSTELNQFVRDAIDEGLLAPSGSGAAAEPMEPSAEVETVERGVD
AAPTAPSDVWALSGPMDCNAPYPLDFSEFEAIASYSDILNYRTQLMADGVSATDDPRLAKAYIALDMASEAVMNLSDPTK
PNEQALYHVAQLLDGRIRPDLTYFQALAQCHEKAELWLGIALLIDGQGTGAAYIDKRFNAFRELPLQLRTSVTAIAVPAL
DRTDGRFLSQKMLASFGEAELRDSAQLQFANAILEMGQGNTQAEILIRTFLLQGRFQEEALFALIRHHRVIDAPVKALLL
DGMLFKIEQSQRDEDIRASMKFVLDELSAESRYLTMMDMAGRDNMQSEAAQSEIRIYFVTGLQRDLASDDPLHNLAAIEA
LSIEAGLLDHHEQRKALYEAATLKAVRLGFASLADELSRKTQPGEAVAEQRATLAYRLKDYPAVFQLADANPSNIQIGLV
AALSAIDANDAAQLQLFTSRLKLDDATILALIEQDAASQRWIVPNAVYQAAGAITDEASKARADRVLGLKQAAASGVAEP
SPTSIAGVPDRLMTTRMALDSLEGGSN
>Mature_587_residues
MRRYLWLLLCGALLAPPVLAAKPEAETAGPDARKQELSTELNQFVRDAIDEGLLAPSGSGAAAEPMEPSAEVETVERGVD
AAPTAPSDVWALSGPMDCNAPYPLDFSEFEAIASYSDILNYRTQLMADGVSATDDPRLAKAYIALDMASEAVMNLSDPTK
PNEQALYHVAQLLDGRIRPDLTYFQALAQCHEKAELWLGIALLIDGQGTGAAYIDKRFNAFRELPLQLRTSVTAIAVPAL
DRTDGRFLSQKMLASFGEAELRDSAQLQFANAILEMGQGNTQAEILIRTFLLQGRFQEEALFALIRHHRVIDAPVKALLL
DGMLFKIEQSQRDEDIRASMKFVLDELSAESRYLTMMDMAGRDNMQSEAAQSEIRIYFVTGLQRDLASDDPLHNLAAIEA
LSIEAGLLDHHEQRKALYEAATLKAVRLGFASLADELSRKTQPGEAVAEQRATLAYRLKDYPAVFQLADANPSNIQIGLV
AALSAIDANDAAQLQLFTSRLKLDDATILALIEQDAASQRWIVPNAVYQAAGAITDEASKARADRVLGLKQAAASGVAEP
SPTSIAGVPDRLMTTRMALDSLEGGSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63746; Mature: 63746

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRYLWLLLCGALLAPPVLAAKPEAETAGPDARKQELSTELNQFVRDAIDEGLLAPSGSG
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AAAEPMEPSAEVETVERGVDAAPTAPSDVWALSGPMDCNAPYPLDFSEFEAIASYSDILN
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
YRTQLMADGVSATDDPRLAKAYIALDMASEAVMNLSDPTKPNEQALYHVAQLLDGRIRPD
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
LTYFQALAQCHEKAELWLGIALLIDGQGTGAAYIDKRFNAFRELPLQLRTSVTAIAVPAL
HHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHCHHEEEECCC
DRTDGRFLSQKMLASFGEAELRDSAQLQFANAILEMGQGNTQAEILIRTFLLQGRFQEEA
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH
LFALIRHHRVIDAPVKALLLDGMLFKIEQSQRDEDIRASMKFVLDELSAESRYLTMMDMA
HHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEHHC
GRDNMQSEAAQSEIRIYFVTGLQRDLASDDPLHNLAAIEALSIEAGLLDHHEQRKALYEA
CCCCHHHHHHHCCEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATLKAVRLGFASLADELSRKTQPGEAVAEQRATLAYRLKDYPAVFQLADANPSNIQIGLV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEHHH
AALSAIDANDAAQLQLFTSRLKLDDATILALIEQDAASQRWIVPNAVYQAAGAITDEASK
HHHHHCCCCCHHHHHHHHHHHCCCCHHEEEEEHHCCCCCCCCCCHHHHHHHCCCCHHHHH
ARADRVLGLKQAAASGVAEPSPTSIAGVPDRLMTTRMALDSLEGGSN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRRYLWLLLCGALLAPPVLAAKPEAETAGPDARKQELSTELNQFVRDAIDEGLLAPSGSG
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AAAEPMEPSAEVETVERGVDAAPTAPSDVWALSGPMDCNAPYPLDFSEFEAIASYSDILN
CCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
YRTQLMADGVSATDDPRLAKAYIALDMASEAVMNLSDPTKPNEQALYHVAQLLDGRIRPD
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
LTYFQALAQCHEKAELWLGIALLIDGQGTGAAYIDKRFNAFRELPLQLRTSVTAIAVPAL
HHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHCHHEEEECCC
DRTDGRFLSQKMLASFGEAELRDSAQLQFANAILEMGQGNTQAEILIRTFLLQGRFQEEA
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHH
LFALIRHHRVIDAPVKALLLDGMLFKIEQSQRDEDIRASMKFVLDELSAESRYLTMMDMA
HHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEHHC
GRDNMQSEAAQSEIRIYFVTGLQRDLASDDPLHNLAAIEALSIEAGLLDHHEQRKALYEA
CCCCHHHHHHHCCEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATLKAVRLGFASLADELSRKTQPGEAVAEQRATLAYRLKDYPAVFQLADANPSNIQIGLV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEHHH
AALSAIDANDAAQLQLFTSRLKLDDATILALIEQDAASQRWIVPNAVYQAAGAITDEASK
HHHHHCCCCCHHHHHHHHHHHCCCCHHEEEEEHHCCCCCCCCCCHHHHHHHCCCCHHHHH
ARADRVLGLKQAAASGVAEPSPTSIAGVPDRLMTTRMALDSLEGGSN
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA