The gene/protein map for NC_008358 is currently unavailable.
Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is flaA [H]

Identifier: 114799536

GI number: 114799536

Start: 252387

End: 253634

Strand: Direct

Name: flaA [H]

Synonym: HNE_0264

Alternate gene names: 114799536

Gene position: 252387-253634 (Clockwise)

Preceding gene: 114800152

Following gene: 114798597

Centisome position: 6.81

GC content: 58.97

Gene sequence:

>1248_bases
ATGTCTAGCATCCTGACTAACAACAGCTCGATGGTTGCGCTCGAGACCCTGCGCAATATCAACCGTAACCTTGAAACCGT
TCAGAGCGAAATCTCGACCGGCAAGAAAGTTTCCAACGCCAAGGACAACGCCGCTGTCTGGGCCGTCTCGACTGTGATGT
CGAGCGATGTTGCAAGCTTCAAGGCGATCTCCGACTCTCTCAACCTGGGTTCGTCCACGGTTGGCGTCGCCCGTTCGGCG
TCGGAAAAAGTTGTCACCACCCTGGAAGAGATCAAGACTCTGATCGTTCAGGCGCAAGGCGAGAACGTTGACCGCGCGAA
GTATCAAACGGACATCGAAGAGAAGATCGGCCTGATCGAGGGTTATGTTTCGGCTGCCCAGTTCAACGGTCTCAACCTTC
TGGATGGTTCGTCCACGGACGCTGTGAACGTTCTGGCGTCGCTTGACCGCGCCTCGAACGGCACCGTTTCGGCCTCTTAT
ATCAGCGTTGATCGTCAGGACCTCTCGGTTTCCGGTGGCGGCTCCAACGCTGTGTTCGGTGCCACGGCTGACACGAGCAC
CACGATCATCGACAATGGTGGCACGAACGCTGGCACGGCTGAAACCGTTGCAAACGGCGCCACGCAAACGATCGCAATTG
CTTCGGTTGGCGATGGCTACAGCTACCGCGTCACGCTTGACGACTCGGCCGGTGCCAACTCGCTCGGCACACGCAGCTTC
GAATTTGTGGCTGACTCGGCCACCAGCTCGGAAGACGTTGCCGAAGCTCTGTCGACGCAGATCAGCAACTTCCTCTCGGC
CACGGGTGACGACAACTACACCGTCTCCTTCAGCGGTTCGGACATCTCGATCACCAACCTTTCGGGCGATGATCTGGACA
TCACCGGTGCTGCAGCAGCCGACGGTACAGCTGGCGTTAACGCCGGCGGCCTGGGCGCGCTCGCCAGCATTGATGTCACG
ACCAATGCAGGGGCAACCTCCGCCCTGACGGCCATTGAAGGCCTGATGAACAAAGCGATCGACGCGGCCGCTGCTTTCGG
TTCTTCGCAGAACCGCATCGCTGGCCAGTCTGAATTCGTTCAGACGCTGGTTGACTCTCTGACAACCGGTATCGGTGGCC
TCACCGACACCGACATGGAAGCGGCTTCGGCAAAACTGCAGGCTCTGCAGGTTCAGCAACAGCTCGGCGTTCAGGCGCTG
TCGATTGCGAACCAGGCGCCTCAGGCTCTGCTGTCGCTCTTCCGCTAA

Upstream 100 bases:

>100_bases
GAACTACGAAAGTTCGGGGCTTCGGCTCCAACGTCAGGACGACGCGTTTCAACAAACAGCCGCAGTCAAAAATAGCGGCG
ACACAAGAATGGATAGATAG

Downstream 100 bases:

>100_bases
CGGACCTTATAGCTCCAGGCGCTCTGGCGCCTGGAGCGCTGAATTAAACCGATTGCCCCGGACGTTTCGGCGTCCGGGTC
AATTCATCAGATACCCAGGA

Product: flagellin Laf1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSSILTNNSSMVALETLRNINRNLETVQSEISTGKKVSNAKDNAAVWAVSTVMSSDVASFKAISDSLNLGSSTVGVARSA
SEKVVTTLEEIKTLIVQAQGENVDRAKYQTDIEEKIGLIEGYVSAAQFNGLNLLDGSSTDAVNVLASLDRASNGTVSASY
ISVDRQDLSVSGGGSNAVFGATADTSTTIIDNGGTNAGTAETVANGATQTIAIASVGDGYSYRVTLDDSAGANSLGTRSF
EFVADSATSSEDVAEALSTQISNFLSATGDDNYTVSFSGSDISITNLSGDDLDITGAAAADGTAGVNAGGLGALASIDVT
TNAGATSALTAIEGLMNKAIDAAAAFGSSQNRIAGQSEFVQTLVDSLTTGIGGLTDTDMEAASAKLQALQVQQQLGVQAL
SIANQAPQALLSLFR

Sequences:

>Translated_415_residues
MSSILTNNSSMVALETLRNINRNLETVQSEISTGKKVSNAKDNAAVWAVSTVMSSDVASFKAISDSLNLGSSTVGVARSA
SEKVVTTLEEIKTLIVQAQGENVDRAKYQTDIEEKIGLIEGYVSAAQFNGLNLLDGSSTDAVNVLASLDRASNGTVSASY
ISVDRQDLSVSGGGSNAVFGATADTSTTIIDNGGTNAGTAETVANGATQTIAIASVGDGYSYRVTLDDSAGANSLGTRSF
EFVADSATSSEDVAEALSTQISNFLSATGDDNYTVSFSGSDISITNLSGDDLDITGAAAADGTAGVNAGGLGALASIDVT
TNAGATSALTAIEGLMNKAIDAAAAFGSSQNRIAGQSEFVQTLVDSLTTGIGGLTDTDMEAASAKLQALQVQQQLGVQAL
SIANQAPQALLSLFR
>Mature_414_residues
SSILTNNSSMVALETLRNINRNLETVQSEISTGKKVSNAKDNAAVWAVSTVMSSDVASFKAISDSLNLGSSTVGVARSAS
EKVVTTLEEIKTLIVQAQGENVDRAKYQTDIEEKIGLIEGYVSAAQFNGLNLLDGSSTDAVNVLASLDRASNGTVSASYI
SVDRQDLSVSGGGSNAVFGATADTSTTIIDNGGTNAGTAETVANGATQTIAIASVGDGYSYRVTLDDSAGANSLGTRSFE
FVADSATSSEDVAEALSTQISNFLSATGDDNYTVSFSGSDISITNLSGDDLDITGAAAADGTAGVNAGGLGALASIDVTT
NAGATSALTAIEGLMNKAIDAAAAFGSSQNRIAGQSEFVQTLVDSLTTGIGGLTDTDMEAASAKLQALQVQQQLGVQALS
IANQAPQALLSLFR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Homopolymer of flaA is able to form a functional filament [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

None

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 42041; Mature: 41910

Theoretical pI: Translated: 3.87; Mature: 3.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSILTNNSSMVALETLRNINRNLETVQSEISTGKKVSNAKDNAAVWAVSTVMSSDVASF
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KAISDSLNLGSSTVGVARSASEKVVTTLEEIKTLIVQAQGENVDRAKYQTDIEEKIGLIE
HHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCHHHHHHHHH
GYVSAAQFNGLNLLDGSSTDAVNVLASLDRASNGTVSASYISVDRQDLSVSGGGSNAVFG
HHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCCCCCEEE
ATADTSTTIIDNGGTNAGTAETVANGATQTIAIASVGDGYSYRVTLDDSAGANSLGTRSF
ECCCCCEEEEECCCCCCCCHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCE
EFVADSATSSEDVAEALSTQISNFLSATGDDNYTVSFSGSDISITNLSGDDLDITGAAAA
EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCC
DGTAGVNAGGLGALASIDVTTNAGATSALTAIEGLMNKAIDAAAAFGSSQNRIAGQSEFV
CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
QTLVDSLTTGIGGLTDTDMEAASAKLQALQVQQQLGVQALSIANQAPQALLSLFR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SSILTNNSSMVALETLRNINRNLETVQSEISTGKKVSNAKDNAAVWAVSTVMSSDVASF
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KAISDSLNLGSSTVGVARSASEKVVTTLEEIKTLIVQAQGENVDRAKYQTDIEEKIGLIE
HHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCHHHHHHHHH
GYVSAAQFNGLNLLDGSSTDAVNVLASLDRASNGTVSASYISVDRQDLSVSGGGSNAVFG
HHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCCCCCEEE
ATADTSTTIIDNGGTNAGTAETVANGATQTIAIASVGDGYSYRVTLDDSAGANSLGTRSF
ECCCCCEEEEECCCCCCCCHHHHHCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCE
EFVADSATSSEDVAEALSTQISNFLSATGDDNYTVSFSGSDISITNLSGDDLDITGAAAA
EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCEEEECCCCC
DGTAGVNAGGLGALASIDVTTNAGATSALTAIEGLMNKAIDAAAAFGSSQNRIAGQSEFV
CCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
QTLVDSLTTGIGGLTDTDMEAASAKLQALQVQQQLGVQALSIANQAPQALLSLFR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2050631; 11481430 [H]