| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799502
Identifier: 114799502
GI number: 114799502
Start: 934938
End: 935561
Strand: Reverse
Name: 114799502
Synonym: HNE_0918
Alternate gene names: NA
Gene position: 935561-934938 (Counterclockwise)
Preceding gene: 114799890
Following gene: 114797272
Centisome position: 25.25
GC content: 69.71
Gene sequence:
>624_bases ATGCATCCAGCCCCCCGCTTCCGCGAGACGGATCTGACTGTCCTGCTGGCGCGGATGGCGGCGCACCCGCTTGCGCTGGT GGCGGTGAATGGCGAGGCAGCGCCGCTGGCGGTGCATACGCCGGTGATTGCGCGGGCCGAGGGGGATGGGGCCGTGCTGC GGTTTCATCTGTCGGCGGCCAATCGCGTGACGGCGCGGCTGCTGGCCGGGGCGGAGGCGACCCTCGTGTTTACGGGGCCG GAGGCTTACATCTCTCCGGACTGGTATGGCGAGGTGCCCGATCAGGTGCCGACCTGGAATTACCTGTCGGTGGAGGCAGA GGGCACGGTCACCGAGACCGGCCGCGAGGGCGCCGCCGCGTTTCTCGATGACCTCTCTGCCGTGTTCGAAACCGCCCTCC TGCCCAAGCCGCCCTGGACGCGGGCGAAGATGAAGCCGGCCGCCTTCGAAGCGATGCTGGGCGGCATCCGCGCTTTCGAG ATGCGACCGCGCCGGTTTGAGGGGATCACGAAGCTGGGGCAGAACAAGACGCCGGAGATGCGGGCGGGCGTGATTGATGG GCTGGACGCGTTGCCCGGCGGGGCCGGGATTGCGGGCGCGATGCGGGGACTGGACCGGGGATAA
Upstream 100 bases:
>100_bases AGCGGCAGCAATACCAGCGCCAAGGTTTGCCAATAGGCGGCGTGACAGGGGCCGGGGATCGGTTCAGGATAGTCGCCTGA TCCGATCCCCAGGCCCTGAC
Downstream 100 bases:
>100_bases GCGGGTATTCGGATTTCAGGCAGCGGTTTTAGCCGGACGCAGCGGGGGCTGGCCGGTGTGTGGGGCTGAATTCGGGGTGC GTTGAAAACTAGGAGGTGTC
Product: putative FMN-binding protein
Products: NA
Alternate protein names: Transcriptional Regulator; Regulatory Protein; Protease Synthase And Sporulation Protein; Transcriptional Regulator PaiB-Like Protein; Transcription Regulator Protein; Negative Transcriptional Regulator Family Protein; Negative Regulatory Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MHPAPRFRETDLTVLLARMAAHPLALVAVNGEAAPLAVHTPVIARAEGDGAVLRFHLSAANRVTARLLAGAEATLVFTGP EAYISPDWYGEVPDQVPTWNYLSVEAEGTVTETGREGAAAFLDDLSAVFETALLPKPPWTRAKMKPAAFEAMLGGIRAFE MRPRRFEGITKLGQNKTPEMRAGVIDGLDALPGGAGIAGAMRGLDRG
Sequences:
>Translated_207_residues MHPAPRFRETDLTVLLARMAAHPLALVAVNGEAAPLAVHTPVIARAEGDGAVLRFHLSAANRVTARLLAGAEATLVFTGP EAYISPDWYGEVPDQVPTWNYLSVEAEGTVTETGREGAAAFLDDLSAVFETALLPKPPWTRAKMKPAAFEAMLGGIRAFE MRPRRFEGITKLGQNKTPEMRAGVIDGLDALPGGAGIAGAMRGLDRG >Mature_207_residues MHPAPRFRETDLTVLLARMAAHPLALVAVNGEAAPLAVHTPVIARAEGDGAVLRFHLSAANRVTARLLAGAEATLVFTGP EAYISPDWYGEVPDQVPTWNYLSVEAEGTVTETGREGAAAFLDDLSAVFETALLPKPPWTRAKMKPAAFEAMLGGIRAFE MRPRRFEGITKLGQNKTPEMRAGVIDGLDALPGGAGIAGAMRGLDRG
Specific function: Unknown
COG id: COG2808
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21982; Mature: 21982
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPAPRFRETDLTVLLARMAAHPLALVAVNGEAAPLAVHTPVIARAEGDGAVLRFHLSAA CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEECCEEEEECCCCEEEEEEECHH NRVTARLLAGAEATLVFTGPEAYISPDWYGEVPDQVPTWNYLSVEAEGTVTETGREGAAA HHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCEEEEECCCCEECCCCCHHHH FLDDLSAVFETALLPKPPWTRAKMKPAAFEAMLGGIRAFEMRPRRFEGITKLGQNKTPEM HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCHH RAGVIDGLDALPGGAGIAGAMRGLDRG HHHHHCCHHCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MHPAPRFRETDLTVLLARMAAHPLALVAVNGEAAPLAVHTPVIARAEGDGAVLRFHLSAA CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEEECCEEEEECCCCEEEEEEECHH NRVTARLLAGAEATLVFTGPEAYISPDWYGEVPDQVPTWNYLSVEAEGTVTETGREGAAA HHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCEEEEECCCCEECCCCCHHHH FLDDLSAVFETALLPKPPWTRAKMKPAAFEAMLGGIRAFEMRPRRFEGITKLGQNKTPEM HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCHH RAGVIDGLDALPGGAGIAGAMRGLDRG HHHHHCCHHCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA