| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is hcpE [H]
Identifier: 114799890
GI number: 114799890
Start: 935626
End: 936954
Strand: Reverse
Name: hcpE [H]
Synonym: HNE_0919
Alternate gene names: 114799890
Gene position: 936954-935626 (Counterclockwise)
Preceding gene: 114797378
Following gene: 114799502
Centisome position: 25.29
GC content: 63.05
Gene sequence:
>1329_bases ATGCCCTTCCGCTTTCAACAAATTCGCCATTTGGCACTGGCAGGGGCCGGCCTGGCCATAGCCTTGCTTGCCCCCTTCCA GTCTGCAGAGGCGCAAGGCGGTTTGCCGCCGGGCGCGGAAAACTGGCCGGCAGCGTGTGAGGCGGGCGACATTGACGCCT GCATCAATCAGGGCATCCGCCTGCTGCAGGGCATCGAGACGCCGGTGGACCTTCCAGGCGCGGCGCGGTTTGCCTCGAAG GCCTGCCAGCTTGGCTCGCCCGATGACTGCCAGATTGCCTGGGAACTCTATAGCGGCGCGCATCCTGATTATGCCGGCGA TACCGCCCGGATGGTGACAGTCGGCGCGGTTGCCTGCGACCAGGGCCTGACGACGCCGTGCAGCGATGCCGCGCTGCGCC TGTTCACCGGTGATGGCGTGCCCAAGAATGTGGAACTGGCCCTGCCGGTCTATGCCAAGGCCTGCGACCTGGAAGACGCG CTGGCCTGCGCCACTCTGGCCACGGAATATCTGGATGGGGACCAGGGCACAGCGATCAATGCCGAGCAAGCGGTGATCTA TGGCAAGAAAGGCTGCGCGCTGGGTCAGCCCGATTCCTGCCGCGTGGTGGAGGCAGCTTATATGCTGCCGGACTATACGA CCTTCGAGCCCAAGGCGGGCCTGGAATATGCCCTCGCCAATTGCGCGGACGGTTCCAAGGAAAGCTGCGTCAATCTTGGG ATCGTCTACACCCAGATCGAAGAATATGATCTGGCTGCAGAGAATTTCGACAAGGCCTGCACCATGGAATATCCGGAGGC GTGCGAAAGCTCGAAAATCCTGAAACAATGGCGCACCGAGGTTGCCGAATACGAAGCCTACCTCGCCCGGCTGGCCGAGC AGAAGGCCGCGATCAACGCGCTGATTGCCTCAAGCGGCCATGACGCGGCCCTGAGCGCAGCGCTGAATGATTATCGCTCT GCGGAACTTGCCGAATTTGTGACCGGTCAGGCGGGCAGTCTTTCAGGCTTTTCCACCAACAATCTCTATGTCGTCTCCTA CTGGTTCGCCGGGCAGGCCACCGGCGCGGCGGCCGATCGGGAACTGGCCTCACGCGGCACAGGCCTCGAAGGCACCTTCG GCGAAGGTACGAACACACCAGGCACCGCAGCGGCGCGCTATCAGGCCGCCTATGGCTCCAGCCCACCGAGCTATACTTCG GCTTCGCCGGCCTCATCGGCGCCGCCGATGAAAAGCGTGGCGGACATCAAGGCCGCAACACGCGACCGGTATCGCTGGGC CCACTGCACCATGAGCGGCAGCAATACCAGCGCCAAGGTTTGCCAATAG
Upstream 100 bases:
>100_bases TCTTCGGGGGCATTACGGACCCGCTTTCCTTGCCTAGGATCATCGATGCATCCGGCTTCGACCGGATTCCCGACATGGTT CAGCAACAAGGAGGCCGCCG
Downstream 100 bases:
>100_bases GCGGCGTGACAGGGGCCGGGGATCGGTTCAGGATAGTCGCCTGATCCGATCCCCAGGCCCTGACATGCATCCAGCCCCCC GCTTCCGCGAGACGGATCTG
Product: beta-lactamase family protein
Products: NA
Alternate protein names: Cysteine-rich protein E [H]
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MPFRFQQIRHLALAGAGLAIALLAPFQSAEAQGGLPPGAENWPAACEAGDIDACINQGIRLLQGIETPVDLPGAARFASK ACQLGSPDDCQIAWELYSGAHPDYAGDTARMVTVGAVACDQGLTTPCSDAALRLFTGDGVPKNVELALPVYAKACDLEDA LACATLATEYLDGDQGTAINAEQAVIYGKKGCALGQPDSCRVVEAAYMLPDYTTFEPKAGLEYALANCADGSKESCVNLG IVYTQIEEYDLAAENFDKACTMEYPEACESSKILKQWRTEVAEYEAYLARLAEQKAAINALIASSGHDAALSAALNDYRS AELAEFVTGQAGSLSGFSTNNLYVVSYWFAGQATGAAADRELASRGTGLEGTFGEGTNTPGTAAARYQAAYGSSPPSYTS ASPASSAPPMKSVADIKAATRDRYRWAHCTMSGSNTSAKVCQ
Sequences:
>Translated_442_residues MPFRFQQIRHLALAGAGLAIALLAPFQSAEAQGGLPPGAENWPAACEAGDIDACINQGIRLLQGIETPVDLPGAARFASK ACQLGSPDDCQIAWELYSGAHPDYAGDTARMVTVGAVACDQGLTTPCSDAALRLFTGDGVPKNVELALPVYAKACDLEDA LACATLATEYLDGDQGTAINAEQAVIYGKKGCALGQPDSCRVVEAAYMLPDYTTFEPKAGLEYALANCADGSKESCVNLG IVYTQIEEYDLAAENFDKACTMEYPEACESSKILKQWRTEVAEYEAYLARLAEQKAAINALIASSGHDAALSAALNDYRS AELAEFVTGQAGSLSGFSTNNLYVVSYWFAGQATGAAADRELASRGTGLEGTFGEGTNTPGTAAARYQAAYGSSPPSYTS ASPASSAPPMKSVADIKAATRDRYRWAHCTMSGSNTSAKVCQ >Mature_441_residues PFRFQQIRHLALAGAGLAIALLAPFQSAEAQGGLPPGAENWPAACEAGDIDACINQGIRLLQGIETPVDLPGAARFASKA CQLGSPDDCQIAWELYSGAHPDYAGDTARMVTVGAVACDQGLTTPCSDAALRLFTGDGVPKNVELALPVYAKACDLEDAL ACATLATEYLDGDQGTAINAEQAVIYGKKGCALGQPDSCRVVEAAYMLPDYTTFEPKAGLEYALANCADGSKESCVNLGI VYTQIEEYDLAAENFDKACTMEYPEACESSKILKQWRTEVAEYEAYLARLAEQKAAINALIASSGHDAALSAALNDYRSA ELAEFVTGQAGSLSGFSTNNLYVVSYWFAGQATGAAADRELASRGTGLEGTFGEGTNTPGTAAARYQAAYGSSPPSYTSA SPASSAPPMKSVADIKAATRDRYRWAHCTMSGSNTSAKVCQ
Specific function: May hydrolyze 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives [H]
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006597 - InterPro: IPR011990 [H]
Pfam domain/function: PF08238 Sel1 [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 46307; Mature: 46176
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS50005 TPR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRFQQIRHLALAGAGLAIALLAPFQSAEAQGGLPPGAENWPAACEAGDIDACINQGIR CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LLQGIETPVDLPGAARFASKACQLGSPDDCQIAWELYSGAHPDYAGDTARMVTVGAVACD HHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEHHHHC QGLTTPCSDAALRLFTGDGVPKNVELALPVYAKACDLEDALACATLATEYLDGDQGTAIN CCCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEC AEQAVIYGKKGCALGQPDSCRVVEAAYMLPDYTTFEPKAGLEYALANCADGSKESCVNLG CCCEEEECCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHEEEE IVYTQIEEYDLAAENFDKACTMEYPEACESSKILKQWRTEVAEYEAYLARLAEQKAAINA EEEEEHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIASSGHDAALSAALNDYRSAELAEFVTGQAGSLSGFSTNNLYVVSYWFAGQATGAAADR HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHH ELASRGTGLEGTFGEGTNTPGTAAARYQAAYGSSPPSYTSASPASSAPPMKSVADIKAAT HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RDRYRWAHCTMSGSNTSAKVCQ HCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure PFRFQQIRHLALAGAGLAIALLAPFQSAEAQGGLPPGAENWPAACEAGDIDACINQGIR CCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LLQGIETPVDLPGAARFASKACQLGSPDDCQIAWELYSGAHPDYAGDTARMVTVGAVACD HHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEHHHHC QGLTTPCSDAALRLFTGDGVPKNVELALPVYAKACDLEDALACATLATEYLDGDQGTAIN CCCCCCCCCCEEEEEECCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEC AEQAVIYGKKGCALGQPDSCRVVEAAYMLPDYTTFEPKAGLEYALANCADGSKESCVNLG CCCEEEECCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHEEEE IVYTQIEEYDLAAENFDKACTMEYPEACESSKILKQWRTEVAEYEAYLARLAEQKAAINA EEEEEHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIASSGHDAALSAALNDYRSAELAEFVTGQAGSLSGFSTNNLYVVSYWFAGQATGAAADR HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHH ELASRGTGLEGTFGEGTNTPGTAAARYQAAYGSSPPSYTSASPASSAPPMKSVADIKAAT HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RDRYRWAHCTMSGSNTSAKVCQ HCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]