Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114799399
Identifier: 114799399
GI number: 114799399
Start: 449047
End: 449517
Strand: Direct
Name: 114799399
Synonym: HNE_0454
Alternate gene names: NA
Gene position: 449047-449517 (Clockwise)
Preceding gene: 114797368
Following gene: 114798205
Centisome position: 12.12
GC content: 62.63
Gene sequence:
>471_bases ATGTCCAAACTCCGCACACGCCTGTTCCAGTCCTGGTTCCGCCTCAGCCGCCCGATGACCCTCGGCGTGCGCGCCGCGGT GGAGAATGAGGCGGGCCATGTCTTCATGGTGCGCCATACCTATGTGCGCGGCTGGTACATGCCCGGCGGCGGCGTCGAAA AGGGCGAGCCTGCAGTGGATGCGCTCGGCCGCGAACTGGTCGAGGAAGCCGGCGTGCGCCTCAATGCGGAGCCGCGCCTT ATCAGTGTCTATTCAAACCACCACAATTTCCCCAACGATCATGTTCTTTTCTACCACGTTCCCTGGGGTAGCTGGGAGCC CGTGAAAGCCACATCCCTGGGCGAAATCGCCGAAACCGCATGGATCGATCCAAAGCTGCCGCCTGAAGGCATCAACACCG GCACGCGGATGCGCTTTGAGGAGCTTTACGGCGGCCTGCCTATCTCGCCCTACTGGGCTCACCGCACCTGA
Upstream 100 bases:
>100_bases GGCTGCCGAGGCTGCCGGGTCCATCCGCCATACGGACTTGACGGCGGCCTTGTTCTTCCAAGGATACAAGGCGTCCGAAT TTGTCCGGGGATGACCGGAA
Downstream 100 bases:
>100_bases TAGGCACCGTCGCGAACGCTCACGGTGGGCACTTCACCGCTCGCGGAGAATTTGTTCCAGGCCGGCTTCAGGCTCTCCCA GAAAGCAGCATGCGGGCTGG
Product: NUDIX family hydrolase
Products: NA
Alternate protein names: Nudix Hydrolase; MutT/Nudix Family Protein; Hydrolase Protein; MutT/NUDIX Family Protein; Hydrolase Protein MutT/Nudix Family; NUDIX Family Hydrolase; MutT/NUDIX Family Hydrolase; Hydrolase NUDIX Family
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSKLRTRLFQSWFRLSRPMTLGVRAAVENEAGHVFMVRHTYVRGWYMPGGGVEKGEPAVDALGRELVEEAGVRLNAEPRL ISVYSNHHNFPNDHVLFYHVPWGSWEPVKATSLGEIAETAWIDPKLPPEGINTGTRMRFEELYGGLPISPYWAHRT
Sequences:
>Translated_156_residues MSKLRTRLFQSWFRLSRPMTLGVRAAVENEAGHVFMVRHTYVRGWYMPGGGVEKGEPAVDALGRELVEEAGVRLNAEPRL ISVYSNHHNFPNDHVLFYHVPWGSWEPVKATSLGEIAETAWIDPKLPPEGINTGTRMRFEELYGGLPISPYWAHRT >Mature_155_residues SKLRTRLFQSWFRLSRPMTLGVRAAVENEAGHVFMVRHTYVRGWYMPGGGVEKGEPAVDALGRELVEEAGVRLNAEPRLI SVYSNHHNFPNDHVLFYHVPWGSWEPVKATSLGEIAETAWIDPKLPPEGINTGTRMRFEELYGGLPISPYWAHRT
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17756; Mature: 17625
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLRTRLFQSWFRLSRPMTLGVRAAVENEAGHVFMVRHTYVRGWYMPGGGVEKGEPAVD CCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHH ALGRELVEEAGVRLNAEPRLISVYSNHHNFPNDHVLFYHVPWGSWEPVKATSLGEIAETA HHHHHHHHHCCCEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH WIDPKLPPEGINTGTRMRFEELYGGLPISPYWAHRT CCCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SKLRTRLFQSWFRLSRPMTLGVRAAVENEAGHVFMVRHTYVRGWYMPGGGVEKGEPAVD CHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHH ALGRELVEEAGVRLNAEPRLISVYSNHHNFPNDHVLFYHVPWGSWEPVKATSLGEIAETA HHHHHHHHHCCCEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH WIDPKLPPEGINTGTRMRFEELYGGLPISPYWAHRT CCCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA