| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is dprA [H]
Identifier: 114799220
GI number: 114799220
Start: 2235221
End: 2236336
Strand: Direct
Name: dprA [H]
Synonym: HNE_2148
Alternate gene names: 114799220
Gene position: 2235221-2236336 (Clockwise)
Preceding gene: 114797074
Following gene: 114798255
Centisome position: 60.33
GC content: 69.27
Gene sequence:
>1116_bases ATGAGCCTGCCCCGTCCCCTCACGGACGGGCAGCGCCTTGACTGGCTGCGCCTGGCGCGCACGCAAAATGTCGGCCCGGT TACCTTTGCCCAGCTGATGCTGCGTTATGGCGATGCCGGAAAAGCCCTCGCCGCCCTGCCCGAAATCGCCAGCCGCGCCG CACGCGGGAAATCGATCACCATTCCGCCTGCGGATGTTATTGCCCGGGAAATCGACGCGGTCGCAAAATATGGCGCCCGC ATCGTGGCAAGCTGCGAGCCGGACTATCCCGCCCTTCTGCACGCGCTTGATCCCCCGCCGCCAGTGCTCACCCTGCTTGG CAATGCGGCCCTCTCGGCCGGGCCCACCTGCGCCATTGTCGGCGCGCGCAATGCCTCCGCCGCGGGCCGCAAGATCGCGC GGGATATGGCCGCTGCGCTCGGCAAGGCCGGCTATACCATCGTCTCGGGCCTCGCCCTCGGTATCGACGGCGAGGCCCAC GCTGCCAGCCTCTCCACAGGAACGGTCGCCGTGCTCGGCGGGGGCATTGATCACGTCTATCCGCCCAAGCATGACCGGCT TTATGCCGAAGTCGCCCAACAGGGGCTTATCGTTTCGGAAATGCCCTTTGGCCACCGCGCCAAGGCGCAGGACTTTCCCC GCCGCAACCGCATCATCACGGGCCTCGCGCGCGGCACGGTCGTCGTCGAGGCGGCCGAACGGTCCGGCTCGCTGATTTCC GCCCGCGTCGCCAATGAACAGGGCCGCGAGGTGATGGCCGTTCCCGGCTCCCCGCTCGACCCGCGCGCGGCGGGCACCAA CAACCTCATCCGCAATGGCGCCGCCCTCGTGCGCCATGCCGGCGATGTGCTGGAAGTGCTCAGCGCTCTGCCCCTGCTGC GCGTCTCTGCGCCCCCGGCCGAGCTGTATGACGCGGCCCATGGCGGCGGCGAGGCGATCCCGCCCTCCGAACTTGCACGG GTCCGCGAAGCGCTCAGCCCCCATGCCATGCCGCTGGACGAAATCGCGCGCGCGGCCGGCGTCTCTGCGGCGCGCGCCGG AGCGATTCTGATGGAGCTGGAACTCGCCGGCGAGGCGATCACCTTTCCGGGCGGAATGGCGGCAAGGGCTGTGTAA
Upstream 100 bases:
>100_bases TCTCGGTGTTTGTCTTCTGGACCCACCGGGAAAATATCGGCCGTCTCCTGAAGGGCACCGAGCCCCGCTTTGGCGCCAAG AAGAAAGACGCGCCGGAGGC
Downstream 100 bases:
>100_bases TTCCTGTCCCGATTTGTCCTGACTTGTCCCGATTTGTCCCATTTTGTCACCCGGCTGACCGGGCATGGCGCTGGTATGGC CGCGATTTGCAGGGTTTTGG
Product: DNA protecting protein DprA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSLPRPLTDGQRLDWLRLARTQNVGPVTFAQLMLRYGDAGKALAALPEIASRAARGKSITIPPADVIAREIDAVAKYGAR IVASCEPDYPALLHALDPPPPVLTLLGNAALSAGPTCAIVGARNASAAGRKIARDMAAALGKAGYTIVSGLALGIDGEAH AASLSTGTVAVLGGGIDHVYPPKHDRLYAEVAQQGLIVSEMPFGHRAKAQDFPRRNRIITGLARGTVVVEAAERSGSLIS ARVANEQGREVMAVPGSPLDPRAAGTNNLIRNGAALVRHAGDVLEVLSALPLLRVSAPPAELYDAAHGGGEAIPPSELAR VREALSPHAMPLDEIARAAGVSAARAGAILMELELAGEAITFPGGMAARAV
Sequences:
>Translated_371_residues MSLPRPLTDGQRLDWLRLARTQNVGPVTFAQLMLRYGDAGKALAALPEIASRAARGKSITIPPADVIAREIDAVAKYGAR IVASCEPDYPALLHALDPPPPVLTLLGNAALSAGPTCAIVGARNASAAGRKIARDMAAALGKAGYTIVSGLALGIDGEAH AASLSTGTVAVLGGGIDHVYPPKHDRLYAEVAQQGLIVSEMPFGHRAKAQDFPRRNRIITGLARGTVVVEAAERSGSLIS ARVANEQGREVMAVPGSPLDPRAAGTNNLIRNGAALVRHAGDVLEVLSALPLLRVSAPPAELYDAAHGGGEAIPPSELAR VREALSPHAMPLDEIARAAGVSAARAGAILMELELAGEAITFPGGMAARAV >Mature_370_residues SLPRPLTDGQRLDWLRLARTQNVGPVTFAQLMLRYGDAGKALAALPEIASRAARGKSITIPPADVIAREIDAVAKYGARI VASCEPDYPALLHALDPPPPVLTLLGNAALSAGPTCAIVGARNASAAGRKIARDMAAALGKAGYTIVSGLALGIDGEAHA ASLSTGTVAVLGGGIDHVYPPKHDRLYAEVAQQGLIVSEMPFGHRAKAQDFPRRNRIITGLARGTVVVEAAERSGSLISA RVANEQGREVMAVPGSPLDPRAAGTNNLIRNGAALVRHAGDVLEVLSALPLLRVSAPPAELYDAAHGGGEAIPPSELARV REALSPHAMPLDEIARAAGVSAARAGAILMELELAGEAITFPGGMAARAV
Specific function: Unknown
COG id: COG0758
COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the smf family [H]
Homologues:
Organism=Escherichia coli, GI48994932, Length=280, Percent_Identity=40.3571428571429, Blast_Score=160, Evalue=9e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003488 - InterPro: IPR010994 [H]
Pfam domain/function: PF02481 DNA_processg_A [H]
EC number: NA
Molecular weight: Translated: 38188; Mature: 38057
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPRPLTDGQRLDWLRLARTQNVGPVTFAQLMLRYGDAGKALAALPEIASRAARGKSIT CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEE IPPADVIAREIDAVAKYGARIVASCEPDYPALLHALDPPPPVLTLLGNAALSAGPTCAIV CCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCCCCHHHHHHHCHHHCCCCCEEEE GARNASAAGRKIARDMAAALGKAGYTIVSGLALGIDGEAHAASLSTGTVAVLGGGIDHVY ECCCCCHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCEEECCCCEEEEEECCCCCCC PPKHDRLYAEVAQQGLIVSEMPFGHRAKAQDFPRRNRIITGLARGTVVVEAAERSGSLIS CCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHCEEEEECCCEEEEEECCCCCCEEE ARVANEQGREVMAVPGSPLDPRAAGTNNLIRNGAALVRHAGDVLEVLSALPLLRVSAPPA EECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHH ELYDAAHGGGEAIPPSELARVREALSPHAMPLDEIARAAGVSAARAGAILMELELAGEAI HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCEEEEEEEECCCEE TFPGGMAARAV ECCCCCHHCCC >Mature Secondary Structure SLPRPLTDGQRLDWLRLARTQNVGPVTFAQLMLRYGDAGKALAALPEIASRAARGKSIT CCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEE IPPADVIAREIDAVAKYGARIVASCEPDYPALLHALDPPPPVLTLLGNAALSAGPTCAIV CCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCCCCHHHHHHHCHHHCCCCCEEEE GARNASAAGRKIARDMAAALGKAGYTIVSGLALGIDGEAHAASLSTGTVAVLGGGIDHVY ECCCCCHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCCCEEECCCCEEEEEECCCCCCC PPKHDRLYAEVAQQGLIVSEMPFGHRAKAQDFPRRNRIITGLARGTVVVEAAERSGSLIS CCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHCEEEEECCCEEEEEECCCCCCEEE ARVANEQGREVMAVPGSPLDPRAAGTNNLIRNGAALVRHAGDVLEVLSALPLLRVSAPPA EECCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHH ELYDAAHGGGEAIPPSELARVREALSPHAMPLDEIARAAGVSAARAGAILMELELAGEAI HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHCEEEEEEEECCCEE TFPGGMAARAV ECCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]