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The map label for this gene is 114799059

Identifier: 114799059

GI number: 114799059

Start: 381843

End: 382274

Strand: Direct

Name: 114799059

Synonym: HNE_0388

Alternate gene names: NA

Gene position: 381843-382274 (Clockwise)

Preceding gene: 114797923

Following gene: 114798082

Centisome position: 10.31

GC content: 62.73

Gene sequence:

>432_bases
ATGAAACCGATCAAACTGAGCGACGCAAATCAGGTAGACCGTCAGGTCGGTGAGCGTATGCGCCGCCGGCGTATCCTGCT
TGGTTTGACGCAGGATCAGGTCGCCGATGCGCTCGGCATTTCCTATCAACAGATCCAGAAATACGAGACCGGGGCAAACC
GGATCAGCGCCGGGCGTCTGGCGCAGATTGCCGAAGTGCTCGAAGTTCTGCCCGGTTGGTTCTTTGGCGTGCCCGAAGCG
GCCGACGCGCCGGGGAGTTCTTCGCGCGCGGTAATTGAGCTGGTCCGCAACTTTTCGCGCATCGAGGACGAGCGTGTGCG
CACCCATCTCATGGCATTGATGCGGTCATTGTCGGGCAGTGGCGAGGGCGAGTCCGCGGAGCTGGAGGGCCAACGCCCGC
AGGCCAATGGCGGCATCAGCGGCCAGGCCTGA

Upstream 100 bases:

>100_bases
GGAGGTGTGCTCTACGTCTGACGGGTGTAGGCTTCTTTGTTCCGCTACGGAAACGGGTGGAGGGGTATCCGGAAACCCGT
TGGCACAGTCAGGTGATCCC

Downstream 100 bases:

>100_bases
ACCGTTCAAGCGCTTGAAATCAAACGGCGGCGCGGATGTTTTCGGCCGCTTCTGCGGGCTTGCCGGCTTCTTCCCAGCAC
CAGGCAGAAGGATTGGCCAG

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKPIKLSDANQVDRQVGERMRRRRILLGLTQDQVADALGISYQQIQKYETGANRISAGRLAQIAEVLEVLPGWFFGVPEA
ADAPGSSSRAVIELVRNFSRIEDERVRTHLMALMRSLSGSGEGESAELEGQRPQANGGISGQA

Sequences:

>Translated_143_residues
MKPIKLSDANQVDRQVGERMRRRRILLGLTQDQVADALGISYQQIQKYETGANRISAGRLAQIAEVLEVLPGWFFGVPEA
ADAPGSSSRAVIELVRNFSRIEDERVRTHLMALMRSLSGSGEGESAELEGQRPQANGGISGQA
>Mature_143_residues
MKPIKLSDANQVDRQVGERMRRRRILLGLTQDQVADALGISYQQIQKYETGANRISAGRLAQIAEVLEVLPGWFFGVPEA
ADAPGSSSRAVIELVRNFSRIEDERVRTHLMALMRSLSGSGEGESAELEGQRPQANGGISGQA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15605; Mature: 15605

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPIKLSDANQVDRQVGERMRRRRILLGLTQDQVADALGISYQQIQKYETGANRISAGRL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AQIAEVLEVLPGWFFGVPEAADAPGSSSRAVIELVRNFSRIEDERVRTHLMALMRSLSGS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GEGESAELEGQRPQANGGISGQA
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPIKLSDANQVDRQVGERMRRRRILLGLTQDQVADALGISYQQIQKYETGANRISAGRL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AQIAEVLEVLPGWFFGVPEAADAPGSSSRAVIELVRNFSRIEDERVRTHLMALMRSLSGS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GEGESAELEGQRPQANGGISGQA
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]