Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114798082
Identifier: 114798082
GI number: 114798082
Start: 388448
End: 390490
Strand: Direct
Name: 114798082
Synonym: HNE_0394
Alternate gene names: NA
Gene position: 388448-390490 (Clockwise)
Preceding gene: 114799059
Following gene: 114799295
Centisome position: 10.48
GC content: 63.49
Gene sequence:
>2043_bases ATGCTGCTGAAGACCCTGCTTCTCGGAAGCCTTGCTGCGATTGCATTGACGGGGGCGGCGATTGCCGACGATACCAGTAC GGACCGTTCCGTTTATGCGGCGGAGGACTTTGCCCAATATGGCCCGGTCAATGCGCTGGACATGGTGCGCCGCATTCCCG GCTTTGCGATCCAGAGCGATGACAGCGGCAATCGCGGCTTTGGCCAGGCGCGGGGGAATGTGCTGATCAACGGGCAGCGG GTGTCGGCCAAGGACAATGGCGCGCAGACGGCGCTGGGGCGGATCGCGGTGGCGCGCGTGGTGCGCATCGAGGTGCTGGA CGGGACGCAGCTGGATATTCCGGGGCTGAGCGGCAAGGTGGTCAACGTCATCACCGACGGCGAGGGCACGACCGATGGCA CCTGGCGCTACAAGATTCGCCTGCGGGAAAACCTGCCGCCCTCGCTGAATGAAGGCACGCTGACGCTGGCCGGGGCGAAA GGCGCGCTGAGCTGGAGCGTTGAGGCCGACAGCGCGCCCCAGCGGGCGGCAGACGCTGGCTGGCGGCTGATCGCGGACGG GCAGGGCGCCCTGCTGGAACAGCGCGAGGAGGACTACACCCGCGTGATCGACGACATTTCCCTCTCCGGGTCGCTCGGCT GGAAACCGGCGAGCGGGGTGATTGCCAATCTCAATGGCAAGATCGGCGTGTGGGAGATGGACGGCAAGCAGATTTCCAAG ACCTATCCGCTGGGCGGGGCAGAGGGGCGGCGCCTGTTCCGCTTTGCCGAGGATGAGTGGAATGCCGAGCTGGGCGGGGA CTATGAATTCGGCGCGGGGCCGGGCCGGCTGAAATTCATCGGCCTGGCGCGCCATGAGCACAGCCCCTTCGTGGACCGCT TCCTGATGGCGGGGCTCGATGGGTCTGGCCAGTATGCCTCCAATTTCGAGCAGACGGTGGACGAGGGCGAATACATTCTG CGCAGCGAATATGCCCTGCAAACGGGGCAGGGGCGCGACTGGCAGATTTCGGCTGAGGGCGCGTTCAACTTTCTGGAGGC CGAAACCGGCCTTGAGGAAGCCAATGGCGGCGGGCCGCTGGTGCCCGTGCCGCTGGACCTGGCCAACACCCGCGTGGAGG AGCGCCGCGGCGAGGTGATCCTCACCCATGGGCGCACGCTGACACCCAAGCTCAGCCTGCAGATTTCCGGCGGGATGGAA TATTCCGAGCTCACACAATCGGGCGACGCGGAGAATGCGCGCGAATTTACCCGGCCCAAGGGCTTTGGCAGCCTTTCCTG GCAGCAGAGCGATACGCTGAAACTCGTCGGCAAGGTGGAGCGGCGGGTTGGCCAGCTCGACTTTTATGATTTTATCTCAT CGGTGAACCTCGACCTTGGCAATGGCCAGTCCGGCAATGCCGAGATCGTGCCCAACCAGTCCTGGCGCTATTCGCTCGAA GCGCAGAAGGATTTCAAGGGCTGGGGCGCCTCCACCGTGCGCCTGATCTATGTCGATCTGGAAGACGTGGTCGACCAGGT GCCGATTGGCGAGGGCGCGGGGCCGGGCAATATTGCCAGCGCCACGGCCTATGCGGTGGAAACCGAATCGACGCTGAAGC TCGCCAAGCTCGGCTTCACCGGCGCGGAGATCACCGCCAAGGGCCGCTATTATGATACCGAGGCGGACGATCCGGTGACC GGCATCCGCCGCTCGATCAACGGCCATCTGATTTATGATTACAATATCGAGCTGCGCCAGGATGTTCCGAGTACGAACAT CGCCTGGGGCGTGATCCTGGAGGGCTTCAAGCAGGAGCCTTATTACCAGCTGTCAGAGGCTGAACTTTCCGGCAACGAGC CGGCCTTCCTGATGGCCTATCTCGAACACAAGGACATCGCCGGCATGACCGGCACAATCGCCATCGGCAACCTCACCAAC CAGAAAGACACCTACTGGCGCCGCATCTATGACGGCGACCGGAACGGGCCCCTGACGCGCACGGAGGAATATTCGCGGTC ATTCGGGGGGATTGTGACGGTGGAATTGAAGGGGAAGTTTTGA
Upstream 100 bases:
>100_bases TGGTCAATATTGATAAGCGGCAAACAGATACTGAAAAACGGTAATTTCGGGCGGCGGGAGGCTGTCTCGGGGGACCAGGC GAAAAACCGGAGATTGACCC
Downstream 100 bases:
>100_bases GGGGGGTATTTGTGACAACTCACTTAGACCCTGCTAGTTTTCTATCAATTGTGAACGCAAGCGCTCCAATCAATGAAATA ATTCCCCATTGAAAACAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Receptor Plug
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MLLKTLLLGSLAAIALTGAAIADDTSTDRSVYAAEDFAQYGPVNALDMVRRIPGFAIQSDDSGNRGFGQARGNVLINGQR VSAKDNGAQTALGRIAVARVVRIEVLDGTQLDIPGLSGKVVNVITDGEGTTDGTWRYKIRLRENLPPSLNEGTLTLAGAK GALSWSVEADSAPQRAADAGWRLIADGQGALLEQREEDYTRVIDDISLSGSLGWKPASGVIANLNGKIGVWEMDGKQISK TYPLGGAEGRRLFRFAEDEWNAELGGDYEFGAGPGRLKFIGLARHEHSPFVDRFLMAGLDGSGQYASNFEQTVDEGEYIL RSEYALQTGQGRDWQISAEGAFNFLEAETGLEEANGGGPLVPVPLDLANTRVEERRGEVILTHGRTLTPKLSLQISGGME YSELTQSGDAENAREFTRPKGFGSLSWQQSDTLKLVGKVERRVGQLDFYDFISSVNLDLGNGQSGNAEIVPNQSWRYSLE AQKDFKGWGASTVRLIYVDLEDVVDQVPIGEGAGPGNIASATAYAVETESTLKLAKLGFTGAEITAKGRYYDTEADDPVT GIRRSINGHLIYDYNIELRQDVPSTNIAWGVILEGFKQEPYYQLSEAELSGNEPAFLMAYLEHKDIAGMTGTIAIGNLTN QKDTYWRRIYDGDRNGPLTRTEEYSRSFGGIVTVELKGKF
Sequences:
>Translated_680_residues MLLKTLLLGSLAAIALTGAAIADDTSTDRSVYAAEDFAQYGPVNALDMVRRIPGFAIQSDDSGNRGFGQARGNVLINGQR VSAKDNGAQTALGRIAVARVVRIEVLDGTQLDIPGLSGKVVNVITDGEGTTDGTWRYKIRLRENLPPSLNEGTLTLAGAK GALSWSVEADSAPQRAADAGWRLIADGQGALLEQREEDYTRVIDDISLSGSLGWKPASGVIANLNGKIGVWEMDGKQISK TYPLGGAEGRRLFRFAEDEWNAELGGDYEFGAGPGRLKFIGLARHEHSPFVDRFLMAGLDGSGQYASNFEQTVDEGEYIL RSEYALQTGQGRDWQISAEGAFNFLEAETGLEEANGGGPLVPVPLDLANTRVEERRGEVILTHGRTLTPKLSLQISGGME YSELTQSGDAENAREFTRPKGFGSLSWQQSDTLKLVGKVERRVGQLDFYDFISSVNLDLGNGQSGNAEIVPNQSWRYSLE AQKDFKGWGASTVRLIYVDLEDVVDQVPIGEGAGPGNIASATAYAVETESTLKLAKLGFTGAEITAKGRYYDTEADDPVT GIRRSINGHLIYDYNIELRQDVPSTNIAWGVILEGFKQEPYYQLSEAELSGNEPAFLMAYLEHKDIAGMTGTIAIGNLTN QKDTYWRRIYDGDRNGPLTRTEEYSRSFGGIVTVELKGKF >Mature_680_residues MLLKTLLLGSLAAIALTGAAIADDTSTDRSVYAAEDFAQYGPVNALDMVRRIPGFAIQSDDSGNRGFGQARGNVLINGQR VSAKDNGAQTALGRIAVARVVRIEVLDGTQLDIPGLSGKVVNVITDGEGTTDGTWRYKIRLRENLPPSLNEGTLTLAGAK GALSWSVEADSAPQRAADAGWRLIADGQGALLEQREEDYTRVIDDISLSGSLGWKPASGVIANLNGKIGVWEMDGKQISK TYPLGGAEGRRLFRFAEDEWNAELGGDYEFGAGPGRLKFIGLARHEHSPFVDRFLMAGLDGSGQYASNFEQTVDEGEYIL RSEYALQTGQGRDWQISAEGAFNFLEAETGLEEANGGGPLVPVPLDLANTRVEERRGEVILTHGRTLTPKLSLQISGGME YSELTQSGDAENAREFTRPKGFGSLSWQQSDTLKLVGKVERRVGQLDFYDFISSVNLDLGNGQSGNAEIVPNQSWRYSLE AQKDFKGWGASTVRLIYVDLEDVVDQVPIGEGAGPGNIASATAYAVETESTLKLAKLGFTGAEITAKGRYYDTEADDPVT GIRRSINGHLIYDYNIELRQDVPSTNIAWGVILEGFKQEPYYQLSEAELSGNEPAFLMAYLEHKDIAGMTGTIAIGNLTN QKDTYWRRIYDGDRNGPLTRTEEYSRSFGGIVTVELKGKF
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73848; Mature: 73848
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKTLLLGSLAAIALTGAAIADDTSTDRSVYAAEDFAQYGPVNALDMVRRIPGFAIQSD CHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEHHHHHHHCCCCHHHHHHHCCCCEEECC DSGNRGFGQARGNVLINGQRVSAKDNGAQTALGRIAVARVVRIEVLDGTQLDIPGLSGKV CCCCCCCCCCCCCEEEECEEECCCCCCHHHHHHHHHEEEEEEEEEECCCEECCCCCCCCE VNVITDGEGTTDGTWRYKIRLRENLPPSLNEGTLTLAGAKGALSWSVEADSAPQRAADAG EEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHCCC WRLIADGQGALLEQREEDYTRVIDDISLSGSLGWKPASGVIANLNGKIGVWEMDGKQISK CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEEE TYPLGGAEGRRLFRFAEDEWNAELGGDYEFGAGPGRLKFIGLARHEHSPFVDRFLMAGLD ECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC GSGQYASNFEQTVDEGEYILRSEYALQTGQGRDWQISAEGAFNFLEAETGLEEANGGGPL CCCCCHHHHHHHHCCCCEEEEECCEEECCCCCCEEEECCCCCEEEEHHCCCCCCCCCCCE VPVPLDLANTRVEERRGEVILTHGRTLTPKLSLQISGGMEYSELTQSGDAENAREFTRPK EEEECCHHHCHHHHCCCCEEEECCCEECCEEEEEEECCCCHHHHHCCCCCCHHHHHCCCC GFGSLSWQQSDTLKLVGKVERRVGQLDFYDFISSVNLDLGNGQSGNAEIVPNQSWRYSLE CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEEE AQKDFKGWGASTVRLIYVDLEDVVDQVPIGEGAGPGNIASATAYAVETESTLKLAKLGFT CCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCC GAEITAKGRYYDTEADDPVTGIRRSINGHLIYDYNIELRQDVPSTNIAWGVILEGFKQEP CCEEEECCEEECCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCCCCEEHHHHHHCCCCCC YYQLSEAELSGNEPAFLMAYLEHKDIAGMTGTIAIGNLTNQKDTYWRRIYDGDRNGPLTR CEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCC TEEYSRSFGGIVTVELKGKF CHHHHHHCCCEEEEEEECCC >Mature Secondary Structure MLLKTLLLGSLAAIALTGAAIADDTSTDRSVYAAEDFAQYGPVNALDMVRRIPGFAIQSD CHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEHHHHHHHCCCCHHHHHHHCCCCEEECC DSGNRGFGQARGNVLINGQRVSAKDNGAQTALGRIAVARVVRIEVLDGTQLDIPGLSGKV CCCCCCCCCCCCCEEEECEEECCCCCCHHHHHHHHHEEEEEEEEEECCCEECCCCCCCCE VNVITDGEGTTDGTWRYKIRLRENLPPSLNEGTLTLAGAKGALSWSVEADSAPQRAADAG EEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHCCC WRLIADGQGALLEQREEDYTRVIDDISLSGSLGWKPASGVIANLNGKIGVWEMDGKQISK CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEEE TYPLGGAEGRRLFRFAEDEWNAELGGDYEFGAGPGRLKFIGLARHEHSPFVDRFLMAGLD ECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC GSGQYASNFEQTVDEGEYILRSEYALQTGQGRDWQISAEGAFNFLEAETGLEEANGGGPL CCCCCHHHHHHHHCCCCEEEEECCEEECCCCCCEEEECCCCCEEEEHHCCCCCCCCCCCE VPVPLDLANTRVEERRGEVILTHGRTLTPKLSLQISGGMEYSELTQSGDAENAREFTRPK EEEECCHHHCHHHHCCCCEEEECCCEECCEEEEEEECCCCHHHHHCCCCCCHHHHHCCCC GFGSLSWQQSDTLKLVGKVERRVGQLDFYDFISSVNLDLGNGQSGNAEIVPNQSWRYSLE CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEEE AQKDFKGWGASTVRLIYVDLEDVVDQVPIGEGAGPGNIASATAYAVETESTLKLAKLGFT CCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCC GAEITAKGRYYDTEADDPVTGIRRSINGHLIYDYNIELRQDVPSTNIAWGVILEGFKQEP CCEEEECCEEECCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCCCCEEHHHHHHCCCCCC YYQLSEAELSGNEPAFLMAYLEHKDIAGMTGTIAIGNLTNQKDTYWRRIYDGDRNGPLTR CEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCC TEEYSRSFGGIVTVELKGKF CHHHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA