Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798082

Identifier: 114798082

GI number: 114798082

Start: 388448

End: 390490

Strand: Direct

Name: 114798082

Synonym: HNE_0394

Alternate gene names: NA

Gene position: 388448-390490 (Clockwise)

Preceding gene: 114799059

Following gene: 114799295

Centisome position: 10.48

GC content: 63.49

Gene sequence:

>2043_bases
ATGCTGCTGAAGACCCTGCTTCTCGGAAGCCTTGCTGCGATTGCATTGACGGGGGCGGCGATTGCCGACGATACCAGTAC
GGACCGTTCCGTTTATGCGGCGGAGGACTTTGCCCAATATGGCCCGGTCAATGCGCTGGACATGGTGCGCCGCATTCCCG
GCTTTGCGATCCAGAGCGATGACAGCGGCAATCGCGGCTTTGGCCAGGCGCGGGGGAATGTGCTGATCAACGGGCAGCGG
GTGTCGGCCAAGGACAATGGCGCGCAGACGGCGCTGGGGCGGATCGCGGTGGCGCGCGTGGTGCGCATCGAGGTGCTGGA
CGGGACGCAGCTGGATATTCCGGGGCTGAGCGGCAAGGTGGTCAACGTCATCACCGACGGCGAGGGCACGACCGATGGCA
CCTGGCGCTACAAGATTCGCCTGCGGGAAAACCTGCCGCCCTCGCTGAATGAAGGCACGCTGACGCTGGCCGGGGCGAAA
GGCGCGCTGAGCTGGAGCGTTGAGGCCGACAGCGCGCCCCAGCGGGCGGCAGACGCTGGCTGGCGGCTGATCGCGGACGG
GCAGGGCGCCCTGCTGGAACAGCGCGAGGAGGACTACACCCGCGTGATCGACGACATTTCCCTCTCCGGGTCGCTCGGCT
GGAAACCGGCGAGCGGGGTGATTGCCAATCTCAATGGCAAGATCGGCGTGTGGGAGATGGACGGCAAGCAGATTTCCAAG
ACCTATCCGCTGGGCGGGGCAGAGGGGCGGCGCCTGTTCCGCTTTGCCGAGGATGAGTGGAATGCCGAGCTGGGCGGGGA
CTATGAATTCGGCGCGGGGCCGGGCCGGCTGAAATTCATCGGCCTGGCGCGCCATGAGCACAGCCCCTTCGTGGACCGCT
TCCTGATGGCGGGGCTCGATGGGTCTGGCCAGTATGCCTCCAATTTCGAGCAGACGGTGGACGAGGGCGAATACATTCTG
CGCAGCGAATATGCCCTGCAAACGGGGCAGGGGCGCGACTGGCAGATTTCGGCTGAGGGCGCGTTCAACTTTCTGGAGGC
CGAAACCGGCCTTGAGGAAGCCAATGGCGGCGGGCCGCTGGTGCCCGTGCCGCTGGACCTGGCCAACACCCGCGTGGAGG
AGCGCCGCGGCGAGGTGATCCTCACCCATGGGCGCACGCTGACACCCAAGCTCAGCCTGCAGATTTCCGGCGGGATGGAA
TATTCCGAGCTCACACAATCGGGCGACGCGGAGAATGCGCGCGAATTTACCCGGCCCAAGGGCTTTGGCAGCCTTTCCTG
GCAGCAGAGCGATACGCTGAAACTCGTCGGCAAGGTGGAGCGGCGGGTTGGCCAGCTCGACTTTTATGATTTTATCTCAT
CGGTGAACCTCGACCTTGGCAATGGCCAGTCCGGCAATGCCGAGATCGTGCCCAACCAGTCCTGGCGCTATTCGCTCGAA
GCGCAGAAGGATTTCAAGGGCTGGGGCGCCTCCACCGTGCGCCTGATCTATGTCGATCTGGAAGACGTGGTCGACCAGGT
GCCGATTGGCGAGGGCGCGGGGCCGGGCAATATTGCCAGCGCCACGGCCTATGCGGTGGAAACCGAATCGACGCTGAAGC
TCGCCAAGCTCGGCTTCACCGGCGCGGAGATCACCGCCAAGGGCCGCTATTATGATACCGAGGCGGACGATCCGGTGACC
GGCATCCGCCGCTCGATCAACGGCCATCTGATTTATGATTACAATATCGAGCTGCGCCAGGATGTTCCGAGTACGAACAT
CGCCTGGGGCGTGATCCTGGAGGGCTTCAAGCAGGAGCCTTATTACCAGCTGTCAGAGGCTGAACTTTCCGGCAACGAGC
CGGCCTTCCTGATGGCCTATCTCGAACACAAGGACATCGCCGGCATGACCGGCACAATCGCCATCGGCAACCTCACCAAC
CAGAAAGACACCTACTGGCGCCGCATCTATGACGGCGACCGGAACGGGCCCCTGACGCGCACGGAGGAATATTCGCGGTC
ATTCGGGGGGATTGTGACGGTGGAATTGAAGGGGAAGTTTTGA

Upstream 100 bases:

>100_bases
TGGTCAATATTGATAAGCGGCAAACAGATACTGAAAAACGGTAATTTCGGGCGGCGGGAGGCTGTCTCGGGGGACCAGGC
GAAAAACCGGAGATTGACCC

Downstream 100 bases:

>100_bases
GGGGGGTATTTGTGACAACTCACTTAGACCCTGCTAGTTTTCTATCAATTGTGAACGCAAGCGCTCCAATCAATGAAATA
ATTCCCCATTGAAAACAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Receptor Plug

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MLLKTLLLGSLAAIALTGAAIADDTSTDRSVYAAEDFAQYGPVNALDMVRRIPGFAIQSDDSGNRGFGQARGNVLINGQR
VSAKDNGAQTALGRIAVARVVRIEVLDGTQLDIPGLSGKVVNVITDGEGTTDGTWRYKIRLRENLPPSLNEGTLTLAGAK
GALSWSVEADSAPQRAADAGWRLIADGQGALLEQREEDYTRVIDDISLSGSLGWKPASGVIANLNGKIGVWEMDGKQISK
TYPLGGAEGRRLFRFAEDEWNAELGGDYEFGAGPGRLKFIGLARHEHSPFVDRFLMAGLDGSGQYASNFEQTVDEGEYIL
RSEYALQTGQGRDWQISAEGAFNFLEAETGLEEANGGGPLVPVPLDLANTRVEERRGEVILTHGRTLTPKLSLQISGGME
YSELTQSGDAENAREFTRPKGFGSLSWQQSDTLKLVGKVERRVGQLDFYDFISSVNLDLGNGQSGNAEIVPNQSWRYSLE
AQKDFKGWGASTVRLIYVDLEDVVDQVPIGEGAGPGNIASATAYAVETESTLKLAKLGFTGAEITAKGRYYDTEADDPVT
GIRRSINGHLIYDYNIELRQDVPSTNIAWGVILEGFKQEPYYQLSEAELSGNEPAFLMAYLEHKDIAGMTGTIAIGNLTN
QKDTYWRRIYDGDRNGPLTRTEEYSRSFGGIVTVELKGKF

Sequences:

>Translated_680_residues
MLLKTLLLGSLAAIALTGAAIADDTSTDRSVYAAEDFAQYGPVNALDMVRRIPGFAIQSDDSGNRGFGQARGNVLINGQR
VSAKDNGAQTALGRIAVARVVRIEVLDGTQLDIPGLSGKVVNVITDGEGTTDGTWRYKIRLRENLPPSLNEGTLTLAGAK
GALSWSVEADSAPQRAADAGWRLIADGQGALLEQREEDYTRVIDDISLSGSLGWKPASGVIANLNGKIGVWEMDGKQISK
TYPLGGAEGRRLFRFAEDEWNAELGGDYEFGAGPGRLKFIGLARHEHSPFVDRFLMAGLDGSGQYASNFEQTVDEGEYIL
RSEYALQTGQGRDWQISAEGAFNFLEAETGLEEANGGGPLVPVPLDLANTRVEERRGEVILTHGRTLTPKLSLQISGGME
YSELTQSGDAENAREFTRPKGFGSLSWQQSDTLKLVGKVERRVGQLDFYDFISSVNLDLGNGQSGNAEIVPNQSWRYSLE
AQKDFKGWGASTVRLIYVDLEDVVDQVPIGEGAGPGNIASATAYAVETESTLKLAKLGFTGAEITAKGRYYDTEADDPVT
GIRRSINGHLIYDYNIELRQDVPSTNIAWGVILEGFKQEPYYQLSEAELSGNEPAFLMAYLEHKDIAGMTGTIAIGNLTN
QKDTYWRRIYDGDRNGPLTRTEEYSRSFGGIVTVELKGKF
>Mature_680_residues
MLLKTLLLGSLAAIALTGAAIADDTSTDRSVYAAEDFAQYGPVNALDMVRRIPGFAIQSDDSGNRGFGQARGNVLINGQR
VSAKDNGAQTALGRIAVARVVRIEVLDGTQLDIPGLSGKVVNVITDGEGTTDGTWRYKIRLRENLPPSLNEGTLTLAGAK
GALSWSVEADSAPQRAADAGWRLIADGQGALLEQREEDYTRVIDDISLSGSLGWKPASGVIANLNGKIGVWEMDGKQISK
TYPLGGAEGRRLFRFAEDEWNAELGGDYEFGAGPGRLKFIGLARHEHSPFVDRFLMAGLDGSGQYASNFEQTVDEGEYIL
RSEYALQTGQGRDWQISAEGAFNFLEAETGLEEANGGGPLVPVPLDLANTRVEERRGEVILTHGRTLTPKLSLQISGGME
YSELTQSGDAENAREFTRPKGFGSLSWQQSDTLKLVGKVERRVGQLDFYDFISSVNLDLGNGQSGNAEIVPNQSWRYSLE
AQKDFKGWGASTVRLIYVDLEDVVDQVPIGEGAGPGNIASATAYAVETESTLKLAKLGFTGAEITAKGRYYDTEADDPVT
GIRRSINGHLIYDYNIELRQDVPSTNIAWGVILEGFKQEPYYQLSEAELSGNEPAFLMAYLEHKDIAGMTGTIAIGNLTN
QKDTYWRRIYDGDRNGPLTRTEEYSRSFGGIVTVELKGKF

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73848; Mature: 73848

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKTLLLGSLAAIALTGAAIADDTSTDRSVYAAEDFAQYGPVNALDMVRRIPGFAIQSD
CHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEHHHHHHHCCCCHHHHHHHCCCCEEECC
DSGNRGFGQARGNVLINGQRVSAKDNGAQTALGRIAVARVVRIEVLDGTQLDIPGLSGKV
CCCCCCCCCCCCCEEEECEEECCCCCCHHHHHHHHHEEEEEEEEEECCCEECCCCCCCCE
VNVITDGEGTTDGTWRYKIRLRENLPPSLNEGTLTLAGAKGALSWSVEADSAPQRAADAG
EEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHCCC
WRLIADGQGALLEQREEDYTRVIDDISLSGSLGWKPASGVIANLNGKIGVWEMDGKQISK
CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEEE
TYPLGGAEGRRLFRFAEDEWNAELGGDYEFGAGPGRLKFIGLARHEHSPFVDRFLMAGLD
ECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC
GSGQYASNFEQTVDEGEYILRSEYALQTGQGRDWQISAEGAFNFLEAETGLEEANGGGPL
CCCCCHHHHHHHHCCCCEEEEECCEEECCCCCCEEEECCCCCEEEEHHCCCCCCCCCCCE
VPVPLDLANTRVEERRGEVILTHGRTLTPKLSLQISGGMEYSELTQSGDAENAREFTRPK
EEEECCHHHCHHHHCCCCEEEECCCEECCEEEEEEECCCCHHHHHCCCCCCHHHHHCCCC
GFGSLSWQQSDTLKLVGKVERRVGQLDFYDFISSVNLDLGNGQSGNAEIVPNQSWRYSLE
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEEE
AQKDFKGWGASTVRLIYVDLEDVVDQVPIGEGAGPGNIASATAYAVETESTLKLAKLGFT
CCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCC
GAEITAKGRYYDTEADDPVTGIRRSINGHLIYDYNIELRQDVPSTNIAWGVILEGFKQEP
CCEEEECCEEECCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCCCCEEHHHHHHCCCCCC
YYQLSEAELSGNEPAFLMAYLEHKDIAGMTGTIAIGNLTNQKDTYWRRIYDGDRNGPLTR
CEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCC
TEEYSRSFGGIVTVELKGKF
CHHHHHHCCCEEEEEEECCC
>Mature Secondary Structure
MLLKTLLLGSLAAIALTGAAIADDTSTDRSVYAAEDFAQYGPVNALDMVRRIPGFAIQSD
CHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEHHHHHHHCCCCHHHHHHHCCCCEEECC
DSGNRGFGQARGNVLINGQRVSAKDNGAQTALGRIAVARVVRIEVLDGTQLDIPGLSGKV
CCCCCCCCCCCCCEEEECEEECCCCCCHHHHHHHHHEEEEEEEEEECCCEECCCCCCCCE
VNVITDGEGTTDGTWRYKIRLRENLPPSLNEGTLTLAGAKGALSWSVEADSAPQRAADAG
EEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCCCHHHCCC
WRLIADGQGALLEQREEDYTRVIDDISLSGSLGWKPASGVIANLNGKIGVWEMDGKQISK
CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCEEEE
TYPLGGAEGRRLFRFAEDEWNAELGGDYEFGAGPGRLKFIGLARHEHSPFVDRFLMAGLD
ECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC
GSGQYASNFEQTVDEGEYILRSEYALQTGQGRDWQISAEGAFNFLEAETGLEEANGGGPL
CCCCCHHHHHHHHCCCCEEEEECCEEECCCCCCEEEECCCCCEEEEHHCCCCCCCCCCCE
VPVPLDLANTRVEERRGEVILTHGRTLTPKLSLQISGGMEYSELTQSGDAENAREFTRPK
EEEECCHHHCHHHHCCCCEEEECCCEECCEEEEEEECCCCHHHHHCCCCCCHHHHHCCCC
GFGSLSWQQSDTLKLVGKVERRVGQLDFYDFISSVNLDLGNGQSGNAEIVPNQSWRYSLE
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCEECCCCCCCCEEECCCCCEEEEEE
AQKDFKGWGASTVRLIYVDLEDVVDQVPIGEGAGPGNIASATAYAVETESTLKLAKLGFT
CCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCC
GAEITAKGRYYDTEADDPVTGIRRSINGHLIYDYNIELRQDVPSTNIAWGVILEGFKQEP
CCEEEECCEEECCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCCCCEEHHHHHHCCCCCC
YYQLSEAELSGNEPAFLMAYLEHKDIAGMTGTIAIGNLTNQKDTYWRRIYDGDRNGPLTR
CEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCC
TEEYSRSFGGIVTVELKGKF
CHHHHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA