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The map label for this gene is yfdR [C]

Identifier: 114799013

GI number: 114799013

Start: 875094

End: 875705

Strand: Reverse

Name: yfdR [C]

Synonym: HNE_0855

Alternate gene names: 114799013

Gene position: 875705-875094 (Counterclockwise)

Preceding gene: 114797280

Following gene: 114798794

Centisome position: 23.64

GC content: 62.25

Gene sequence:

>612_bases
TTGAAGCGTTCTGTTAAGCCCCCTCGCGTCTGGCAGCGGATGTTGTCTGGCCGGCGCCTTGATCTGGCACATCCCTCGCC
GATGGATGTGGAAATCGAGGATATTGCCCATGGGCTGGCCCGTGTGGCGCGCTGGAACGGGCAGACGCGGGGCGAGCATG
CCTTTTCCGTGGCTGAACACTCGGTGCTGGTGGAGCAGATCGTGCGCAAGCTGGAACCCGGTCTCCCGCCGGAGGCCTGG
CTGACCGCCCTGCTGCATGACAGCCCGGAATATGTGATCGGGGACATGATCTCCCCGTTCAAGGCGCTGCTGGGGGAGAG
CTATAAGGATATTGAAGCCCGTTTGCAGGAAGCCATTCACATCCGGTTCGGCCTGAAACCCCTGACAACGGCGAAGCTGA
AGAAGACGATCAAGAAGGCCGACCATATCTGCGCCTGGTTTGAGGCGGTGCAGCTGGCGGGCTTCAGCGAGGCGGAATCC
GACGGCTTCTTCGGGCACCCCCCTGAAGGCATGAAGTTTCGCCTGAAGCCCCTGCCCGCGCCCGATGCGCAGAGGCTGTT
CCTGAAGCGCTTTGAGGATATTCAGGCCGTGATCGCGGCGGAGGCTGCCTGA

Upstream 100 bases:

>100_bases
GGCAAACGGGGGCACAAACAAGGCGAGTTTGTAACCGTTTCGCCCCGGTTTATTTACCCCTGCTACCAATCCCTTAAGAT
GCCCCAATGGAGCCCACCCC

Downstream 100 bases:

>100_bases
TGCCCGCCACCTCTGCCCTGCTGATTGGCCTGTCTGCCGTGATGGTTGCCATCAAGGACGGGGAGCCGCATGTGCTGGTG
ACCCGCCGGCCGAGCGGCGA

Product: HD domain-containing protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKRSVKPPRVWQRMLSGRRLDLAHPSPMDVEIEDIAHGLARVARWNGQTRGEHAFSVAEHSVLVEQIVRKLEPGLPPEAW
LTALLHDSPEYVIGDMISPFKALLGESYKDIEARLQEAIHIRFGLKPLTTAKLKKTIKKADHICAWFEAVQLAGFSEAES
DGFFGHPPEGMKFRLKPLPAPDAQRLFLKRFEDIQAVIAAEAA

Sequences:

>Translated_203_residues
MKRSVKPPRVWQRMLSGRRLDLAHPSPMDVEIEDIAHGLARVARWNGQTRGEHAFSVAEHSVLVEQIVRKLEPGLPPEAW
LTALLHDSPEYVIGDMISPFKALLGESYKDIEARLQEAIHIRFGLKPLTTAKLKKTIKKADHICAWFEAVQLAGFSEAES
DGFFGHPPEGMKFRLKPLPAPDAQRLFLKRFEDIQAVIAAEAA
>Mature_203_residues
MKRSVKPPRVWQRMLSGRRLDLAHPSPMDVEIEDIAHGLARVARWNGQTRGEHAFSVAEHSVLVEQIVRKLEPGLPPEAW
LTALLHDSPEYVIGDMISPFKALLGESYKDIEARLQEAIHIRFGLKPLTTAKLKKTIKKADHICAWFEAVQLAGFSEAES
DGFFGHPPEGMKFRLKPLPAPDAQRLFLKRFEDIQAVIAAEAA

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082090, Length=187, Percent_Identity=30.4812834224599, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22804; Mature: 22804

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSVKPPRVWQRMLSGRRLDLAHPSPMDVEIEDIAHGLARVARWNGQTRGEHAFSVAEH
CCCCCCCHHHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SVLVEQIVRKLEPGLPPEAWLTALLHDSPEYVIGDMISPFKALLGESYKDIEARLQEAIH
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IRFGLKPLTTAKLKKTIKKADHICAWFEAVQLAGFSEAESDGFFGHPPEGMKFRLKPLPA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCC
PDAQRLFLKRFEDIQAVIAAEAA
CCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRSVKPPRVWQRMLSGRRLDLAHPSPMDVEIEDIAHGLARVARWNGQTRGEHAFSVAEH
CCCCCCCHHHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
SVLVEQIVRKLEPGLPPEAWLTALLHDSPEYVIGDMISPFKALLGESYKDIEARLQEAIH
HHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IRFGLKPLTTAKLKKTIKKADHICAWFEAVQLAGFSEAESDGFFGHPPEGMKFRLKPLPA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCC
PDAQRLFLKRFEDIQAVIAAEAA
CCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282711 [H]