| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is fabH [H]
Identifier: 114797280
GI number: 114797280
Start: 876077
End: 877198
Strand: Reverse
Name: fabH [H]
Synonym: HNE_0857
Alternate gene names: 114797280
Gene position: 877198-876077 (Counterclockwise)
Preceding gene: 114798297
Following gene: 114799013
Centisome position: 23.68
GC content: 61.05
Gene sequence:
>1122_bases ATGCCGAGCCCCGTGATTTCCGCCACTGGTCTGTGGACCCCGCCCAACTCGATTTCCAACGCTGAACTGGTCGCCAGCTA CAATGCCTGGGCCGACAACTGGAATGTCGAGAACGCCGCCGACATCAGCTCCGGCCTGCTGGAGCCCAAAACCCATTCCT CCGTCGAGTTCATCGAGAAGGCCTCGGGCATCAAGGCGCGCTATGTGATCGACAAGGAGGGCGTGCTGAACCCCGATATC ATGACCCCGCGCATTCCTGAGCGGCCGAATGAACAGATTTCCGTACTGGCCGAAATGGCCGTGCATGCCGCGCGCGACGC GCTCAAGCGGGCCGGGCGCGACCCGAAGGACATCGGCGCGGTGATCTGCGCGGCGTCCAACATGCAGCGCGCCTATCCGG CGATGGCGATTGAAGTGCAGGAAGCGCTCGGCATCGAGGGATTTGCGTTTGATATGAACGTGGCCTGCTCCTCAGCCACG TTCGGCATTCAGACGGCGGCGGACTTTATCCGCTCGGGCAATGCCAGATCGGTGCTGGTGGTGAACCCCGAAATCTGTTC GGGCCATCTCAACTTCACCGACCGCGACAGCCATTTCATCTTTGGTGATGTGGCCACCGCCATCCTGGTAGAAGACGAGG CGATTGCCCCGGCCGGGCACTGGAAGATCCTGGGTTCGCGGCTGAAGACGCAATTTTCCAACAACATCCGCAACAATTTC GGCTTCCTGAACCGCGCGGCGCCTGACGGCATCGGCACGCCGGACAAGCTGTTCGTTCAGGAAGGCCGCAAGGTGTTCAA GGAAGTGGTGCCGATGGTGGCAGAGATGATCAATGGTCATCTGGGCGAACTGGGCATCGAGGCGGGCGCTCTGAAACGCA TGTGGCTGCATCAGGCCAACGCCAACATGAACCGGCTGATCTCATCGAAGGTGCTGGGCCATGAGGCGAGCGACGCTGAA AGCCCTACAGTGCTCGACACCTACGCCAACACGTCTTCGGCGGGCTCGATCATCGCCTTCCATCTGCACTCGGAAGACTT CACGGCCGGACAGAAAGGCCTGATCTGCTCGTTCGGAGCAGGCTATTCGGCTGGAACTGTTGTGGTGGAGCGGGTGGGCT GA
Upstream 100 bases:
>100_bases CCTTGTGCTTTGCCCGCAACGCGCGTTACAGCTTTCCCTACAAGGATATAGCTAGAAGGGCCTGACGCTTGCGCGCGGAC AGGCGCCGCCGGAGACCCCT
Downstream 100 bases:
>100_bases TCGCCCGGAAACGACTATTCGTCGAAGTCTTCGGTGAACAGGTCGCCCCAGAGGGCGCGGCGGCTGGCTTTGGCCGCCTC GATGACCACAATGATGGCAC
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MPSPVISATGLWTPPNSISNAELVASYNAWADNWNVENAADISSGLLEPKTHSSVEFIEKASGIKARYVIDKEGVLNPDI MTPRIPERPNEQISVLAEMAVHAARDALKRAGRDPKDIGAVICAASNMQRAYPAMAIEVQEALGIEGFAFDMNVACSSAT FGIQTAADFIRSGNARSVLVVNPEICSGHLNFTDRDSHFIFGDVATAILVEDEAIAPAGHWKILGSRLKTQFSNNIRNNF GFLNRAAPDGIGTPDKLFVQEGRKVFKEVVPMVAEMINGHLGELGIEAGALKRMWLHQANANMNRLISSKVLGHEASDAE SPTVLDTYANTSSAGSIIAFHLHSEDFTAGQKGLICSFGAGYSAGTVVVERVG
Sequences:
>Translated_373_residues MPSPVISATGLWTPPNSISNAELVASYNAWADNWNVENAADISSGLLEPKTHSSVEFIEKASGIKARYVIDKEGVLNPDI MTPRIPERPNEQISVLAEMAVHAARDALKRAGRDPKDIGAVICAASNMQRAYPAMAIEVQEALGIEGFAFDMNVACSSAT FGIQTAADFIRSGNARSVLVVNPEICSGHLNFTDRDSHFIFGDVATAILVEDEAIAPAGHWKILGSRLKTQFSNNIRNNF GFLNRAAPDGIGTPDKLFVQEGRKVFKEVVPMVAEMINGHLGELGIEAGALKRMWLHQANANMNRLISSKVLGHEASDAE SPTVLDTYANTSSAGSIIAFHLHSEDFTAGQKGLICSFGAGYSAGTVVVERVG >Mature_372_residues PSPVISATGLWTPPNSISNAELVASYNAWADNWNVENAADISSGLLEPKTHSSVEFIEKASGIKARYVIDKEGVLNPDIM TPRIPERPNEQISVLAEMAVHAARDALKRAGRDPKDIGAVICAASNMQRAYPAMAIEVQEALGIEGFAFDMNVACSSATF GIQTAADFIRSGNARSVLVVNPEICSGHLNFTDRDSHFIFGDVATAILVEDEAIAPAGHWKILGSRLKTQFSNNIRNNFG FLNRAAPDGIGTPDKLFVQEGRKVFKEVVPMVAEMINGHLGELGIEAGALKRMWLHQANANMNRLISSKVLGHEASDAES PTVLDTYANTSSAGSIIAFHLHSEDFTAGQKGLICSFGAGYSAGTVVVERVG
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=327, Percent_Identity=26.9113149847095, Blast_Score=96, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 39950; Mature: 39818
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPVISATGLWTPPNSISNAELVASYNAWADNWNVENAADISSGLLEPKTHSSVEFIEK CCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH ASGIKARYVIDKEGVLNPDIMTPRIPERPNEQISVLAEMAVHAARDALKRAGRDPKDIGA HCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHE VICAASNMQRAYPAMAIEVQEALGIEGFAFDMNVACSSATFGIQTAADFIRSGNARSVLV EEEECCCHHHHCCHHEEEHHHHHCCCCEEEECEEEECCCCCCHHHHHHHHHCCCCCEEEE VNPEICSGHLNFTDRDSHFIFGDVATAILVEDEAIAPAGHWKILGSRLKTQFSNNIRNNF ECHHHHCCCCCCCCCCCCEEEHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC GFLNRAAPDGIGTPDKLFVQEGRKVFKEVVPMVAEMINGHLGELGIEAGALKRMWLHQAN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCC ANMNRLISSKVLGHEASDAESPTVLDTYANTSSAGSIIAFHLHSEDFTAGQKGLICSFGA CCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEECCC GYSAGTVVVERVG CCCCCEEEEEECC >Mature Secondary Structure PSPVISATGLWTPPNSISNAELVASYNAWADNWNVENAADISSGLLEPKTHSSVEFIEK CCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH ASGIKARYVIDKEGVLNPDIMTPRIPERPNEQISVLAEMAVHAARDALKRAGRDPKDIGA HCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHE VICAASNMQRAYPAMAIEVQEALGIEGFAFDMNVACSSATFGIQTAADFIRSGNARSVLV EEEECCCHHHHCCHHEEEHHHHHCCCCEEEECEEEECCCCCCHHHHHHHHHCCCCCEEEE VNPEICSGHLNFTDRDSHFIFGDVATAILVEDEAIAPAGHWKILGSRLKTQFSNNIRNNF ECHHHHCCCCCCCCCCCCEEEHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC GFLNRAAPDGIGTPDKLFVQEGRKVFKEVVPMVAEMINGHLGELGIEAGALKRMWLHQAN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCC ANMNRLISSKVLGHEASDAESPTVLDTYANTSSAGSIIAFHLHSEDFTAGQKGLICSFGA CCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEECCC GYSAGTVVVERVG CCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA