| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798862
Identifier: 114798862
GI number: 114798862
Start: 847137
End: 847586
Strand: Reverse
Name: 114798862
Synonym: HNE_0825
Alternate gene names: NA
Gene position: 847586-847137 (Counterclockwise)
Preceding gene: 114797643
Following gene: 114797430
Centisome position: 22.88
GC content: 65.11
Gene sequence:
>450_bases ATGTCTTCCCAGATTACCAATCGCGCGCAGGCCAAAGCCCGTGCCCGCGAGCTACGCGCCGGGCTTTCGGCCGCCGGCAC GCCCATTTCCCATTCTGAATCGCTCGAACGGGTCGCTCGTGAACTCGGCTACCGGGACTGGAATACCGCTTCGGCGCGCC TGTCGAACGCGCCGGAAATTCCGCTTCAGGTCGGCGATCTTGTGGCCGGGCGCTACCTCAAACAGCCTTTCACCGGCCGG GTTCTGGCGGTGAAGGAGCTCTTTGGCGGGGCCGCGTTCGAAGTGACGATCCAGTTCGACGCGCCCGTCGATGTGGTCGA GTTCGAGAGCTTCTCAAACCTGCGCACCCGGGTGACCATCACGGTCTCCGCGTCCGGCATTTCGCAGGCCCGCACCAGCG ACGGGGCCCCCCACATGATCCTGGAGCGCACCGGGGCTGAGATCATCTGA
Upstream 100 bases:
>100_bases TTGGCGCCGATCAGACAGCAGATGAGATCCCTCACCCTGCCAGTCCTGCAGCAAAGCGAGCCCTGCTTCATTGAGACCGG CTGGATGTAAGGACCCTCTG
Downstream 100 bases:
>100_bases AGGCCAAGGGCGGCGGTTACGGGTAAAGCCGGACCGTCGCCCAGCCGCCATCGGCCTTGCGGTAGAAGCGCAGCCGGTCG TGCATCCGGAAGGCCTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSSQITNRAQAKARARELRAGLSAAGTPISHSESLERVARELGYRDWNTASARLSNAPEIPLQVGDLVAGRYLKQPFTGR VLAVKELFGGAAFEVTIQFDAPVDVVEFESFSNLRTRVTITVSASGISQARTSDGAPHMILERTGAEII
Sequences:
>Translated_149_residues MSSQITNRAQAKARARELRAGLSAAGTPISHSESLERVARELGYRDWNTASARLSNAPEIPLQVGDLVAGRYLKQPFTGR VLAVKELFGGAAFEVTIQFDAPVDVVEFESFSNLRTRVTITVSASGISQARTSDGAPHMILERTGAEII >Mature_148_residues SSQITNRAQAKARARELRAGLSAAGTPISHSESLERVARELGYRDWNTASARLSNAPEIPLQVGDLVAGRYLKQPFTGRV LAVKELFGGAAFEVTIQFDAPVDVVEFESFSNLRTRVTITVSASGISQARTSDGAPHMILERTGAEII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16071; Mature: 15940
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQITNRAQAKARARELRAGLSAAGTPISHSESLERVARELGYRDWNTASARLSNAPEI CCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCC PLQVGDLVAGRYLKQPFTGRVLAVKELFGGAAFEVTIQFDAPVDVVEFESFSNLRTRVTI CEEHHHHHHHHHHCCCCCCHHEEEHHHHCCEEEEEEEEECCCCCEEECCCCCCCEEEEEE TVSASGISQARTSDGAPHMILERTGAEII EEECCCCCHHCCCCCCCEEEEECCCCCCC >Mature Secondary Structure SSQITNRAQAKARARELRAGLSAAGTPISHSESLERVARELGYRDWNTASARLSNAPEI CCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCC PLQVGDLVAGRYLKQPFTGRVLAVKELFGGAAFEVTIQFDAPVDVVEFESFSNLRTRVTI CEEHHHHHHHHHHCCCCCCHHEEEHHHHCCEEEEEEEEECCCCCEEECCCCCCCEEEEEE TVSASGISQARTSDGAPHMILERTGAEII EEECCCCCHHCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA