The gene/protein map for NC_008358 is currently unavailable.
Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is yrrI [H]

Identifier: 114798789

GI number: 114798789

Start: 1081472

End: 1082521

Strand: Reverse

Name: yrrI [H]

Synonym: HNE_1074

Alternate gene names: 114798789

Gene position: 1082521-1081472 (Counterclockwise)

Preceding gene: 114799641

Following gene: 114797803

Centisome position: 29.22

GC content: 64.86

Gene sequence:

>1050_bases
ATGTCCGGAAGCCCTAATCTTTCAGGCTTTACCGCCCGCCTTGTGCTCGTGCTGTTTATCGGCGGCATTGCGCTGGCGGC
ATGGGTTGTGCGCGACGCATTCCTGTTGATGTTTGCCGCCACGCTGCTGGCCATCGCCGTTCACGGAATCGCTGACGCGC
TCACCCGCGCCGCGCCGCTGCCAAGGCAAGGCGCTTTGGCCGCCGCCGCGCTGCTCATGACCGGCAGCGTCGCCGCCATC
CTCTGGATATTCGGCGCCCAGCTTGCCAGCGAGCTTTCAGGCGTCACTGACCGGCTCCCCGGCGCCTGGCAGCGCGCAAA
AGAAACCCTGGAGGCCCATCCCGCCGGGTCCGCCCTCGTCGCGGAAATCGAAGCGGTTGCAGCAGGCGACTCGGGCGGCT
CTTTACGCGGTATGCTGACGGATGCCGGCGGCTACGCCCTGCCCTTTGCTTCGGGGCTCACCTCTGCGCTTCTGGTCATC
TTCATTGCAGCCTTCCTGACCACCTCTGCGGTTTCCACCCGTAACGGCGTCCTGCTCGTGTTGCCCAAGGGCGTCGACGA
AAAAGTCGGCAAGGCGCTCAACGCATCCGGGCGCGCCCTGAAAAGATGGCTGCTCGGTATTTCCATCGACATGGTGATCA
TCACCGCCGTGATGGCGCTGACGCTCTGGCTGCTCGGTGTTCCGGCCTTCCTCGGCCTGGCGCTGATTGCGGGCCTGGCG
CAGTTCGTGCCCACCGTCGGCCCGCTTCTGGCTGCCGTCCCCGGCGTACTGCTGGCCTTCACCGTCAGCCCGATGACCGC
CCTGTGGACCGCCATTGCCTATTTCACGGTGTCCCAGCTGGAGGCAAACCTCGTCTATCCCCTGATCCAGAAGGAAACGA
CCTCCATCTCCCCGGCGCTGAACCTGTTTGCCATTCTGGCCTTTGGCATGCTGCTCGGCCCGCTCGGCGTCCTGCTGGCA
ACGCCCATCCTCGTCGTTCTCTCGGTCTTCGTCATCCAGCTCTATGTGCAGGATACGCTCGGCAAGGAGGCAGACATCCC
CGGCGCCTGA

Upstream 100 bases:

>100_bases
AGAATTTTCCGCTTGAATTTCCTGCCCGCGGTGTATGCTAATCCATCTCGAGATTGCATTTTGTTGACTGATCCCACCCC
TGCCAGGAGGACCTTCCCGT

Downstream 100 bases:

>100_bases
CCCCGCCCCACACTCACAACAAGATCGGCCCCCCATTTTGCGCTTATTTCTCAAAATAGTTTGCGCGCGCCCCCGCCAGT
CCCGCGCCTTGGTTCAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSGSPNLSGFTARLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPLPRQGALAAAALLMTGSVAAI
LWIFGAQLASELSGVTDRLPGAWQRAKETLEAHPAGSALVAEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVI
FIAAFLTTSAVSTRNGVLLVLPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAGLA
QFVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISPALNLFAILAFGMLLGPLGVLLA
TPILVVLSVFVIQLYVQDTLGKEADIPGA

Sequences:

>Translated_349_residues
MSGSPNLSGFTARLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPLPRQGALAAAALLMTGSVAAI
LWIFGAQLASELSGVTDRLPGAWQRAKETLEAHPAGSALVAEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVI
FIAAFLTTSAVSTRNGVLLVLPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAGLA
QFVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISPALNLFAILAFGMLLGPLGVLLA
TPILVVLSVFVIQLYVQDTLGKEADIPGA
>Mature_348_residues
SGSPNLSGFTARLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPLPRQGALAAAALLMTGSVAAIL
WIFGAQLASELSGVTDRLPGAWQRAKETLEAHPAGSALVAEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVIF
IAAFLTTSAVSTRNGVLLVLPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAGLAQ
FVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISPALNLFAILAFGMLLGPLGVLLAT
PILVVLSVFVIQLYVQDTLGKEADIPGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 35802; Mature: 35671

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGSPNLSGFTARLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRQGALAAAALLMTGSVAAILWIFGAQLASELSGVTDRLPGAWQRAKETLEAHPAGSALV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH
AEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVIFIAAFLTTSAVSTRNGVLLV
HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
LPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAGLA
ECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISPAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
NLFAILAFGMLLGPLGVLLATPILVVLSVFVIQLYVQDTLGKEADIPGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SGSPNLSGFTARLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRQGALAAAALLMTGSVAAILWIFGAQLASELSGVTDRLPGAWQRAKETLEAHPAGSALV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH
AEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVIFIAAFLTTSAVSTRNGVLLV
HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
LPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAGLA
ECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISPAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
NLFAILAFGMLLGPLGVLLATPILVVLSVFVIQLYVQDTLGKEADIPGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]