Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
---|---|
Accession | NC_008358 |
Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114798752
Identifier: 114798752
GI number: 114798752
Start: 531985
End: 532743
Strand: Direct
Name: 114798752
Synonym: HNE_0537
Alternate gene names: NA
Gene position: 531985-532743 (Clockwise)
Preceding gene: 114797807
Following gene: 114797654
Centisome position: 14.36
GC content: 62.45
Gene sequence:
>759_bases ATGTCAGGCGATGGGGGCTATGAAGGCGAGAGCGTGCTGGCGCCGCCGGTAAACATCGGCGCGCCCGAAGACCTCGCGCC CCTCAAGGCGAAATTCGTCCACTATCCCGGCAGCCAACAGCTGATCCTCTGGCTGCCCCAGGATGGATATGCCGGATACA GCGTCCTGCGTATCCATGGTCCCGGTGGCAAGCCGATCGAAGACACCGCGCTCACCTCCCGCCTGAATGGCCGTGTGCAG ATATTGATCGACACCTGGCCCTGGCCGCCCGGCCCTTACCATATCGAGATCACCCACAAGGAAGGCTGGCGCCACGAATT GTCGCTCGAAAAGCTGGAAGAGGGCATCGCCCCACCGCCGCCCGCACCGCCTGTAATCGAGGAAAGGTCTGGCCCCATCG TCTACCGCGACAGCGCCGGTAACATCCTTCCCGATCTTGATCTGGAACTGCGCGAGCGGGAATTTGCCCGCCTCGCCGCG CGCTTCGGCCGGCGCCTCGAATTTGAAGGCAATGCCCGCGCCGGCACGATCATCTATATCGAAGGCGACATCCGCCTGCG CTTCTATCACGAGATGTGCACCCACCCCGTCCACTTCAGCATCGACATTCCGCCACCGGAAAAATGGGAAGCTGCCACCG GCCGCCCGCTGGCCGAGCGGGAAGACATCCTCGAATTCCTCGCCGCAGAAACCCGCCGCCGTCAGGCCTCCCGCTGTAAT TATGTGATCTATCCCAACCGGATCGATTTCGTGGATTGA
Upstream 100 bases:
>100_bases TTGTTGTTGACCGGTATATGGGATCGGGCAGGGATGAGGGCAGGCAGTCATCCAAGATAGCATTCATGCGCGGGGTGCAT GAATGAGGCGGAGGGAGCAG
Downstream 100 bases:
>100_bases TCAGTTACTCGTTTTGTACAGAGCCCAGATCGGTCGTTGGCTCCAATCTTCTGGGAATCCCATCGCTTCCTGCTGGTCAG GAGCGCGAGATTCTACCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSGDGGYEGESVLAPPVNIGAPEDLAPLKAKFVHYPGSQQLILWLPQDGYAGYSVLRIHGPGGKPIEDTALTSRLNGRVQ ILIDTWPWPPGPYHIEITHKEGWRHELSLEKLEEGIAPPPPAPPVIEERSGPIVYRDSAGNILPDLDLELREREFARLAA RFGRRLEFEGNARAGTIIYIEGDIRLRFYHEMCTHPVHFSIDIPPPEKWEAATGRPLAEREDILEFLAAETRRRQASRCN YVIYPNRIDFVD
Sequences:
>Translated_252_residues MSGDGGYEGESVLAPPVNIGAPEDLAPLKAKFVHYPGSQQLILWLPQDGYAGYSVLRIHGPGGKPIEDTALTSRLNGRVQ ILIDTWPWPPGPYHIEITHKEGWRHELSLEKLEEGIAPPPPAPPVIEERSGPIVYRDSAGNILPDLDLELREREFARLAA RFGRRLEFEGNARAGTIIYIEGDIRLRFYHEMCTHPVHFSIDIPPPEKWEAATGRPLAEREDILEFLAAETRRRQASRCN YVIYPNRIDFVD >Mature_251_residues SGDGGYEGESVLAPPVNIGAPEDLAPLKAKFVHYPGSQQLILWLPQDGYAGYSVLRIHGPGGKPIEDTALTSRLNGRVQI LIDTWPWPPGPYHIEITHKEGWRHELSLEKLEEGIAPPPPAPPVIEERSGPIVYRDSAGNILPDLDLELREREFARLAAR FGRRLEFEGNARAGTIIYIEGDIRLRFYHEMCTHPVHFSIDIPPPEKWEAATGRPLAEREDILEFLAAETRRRQASRCNY VIYPNRIDFVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28431; Mature: 28299
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDGGYEGESVLAPPVNIGAPEDLAPLKAKFVHYPGSQQLILWLPQDGYAGYSVLRIHG CCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEEC PGGKPIEDTALTSRLNGRVQILIDTWPWPPGPYHIEITHKEGWRHELSLEKLEEGIAPPP CCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCC PAPPVIEERSGPIVYRDSAGNILPDLDLELREREFARLAARFGRRLEFEGNARAGTIIYI CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEE EGDIRLRFYHEMCTHPVHFSIDIPPPEKWEAATGRPLAEREDILEFLAAETRRRQASRCN ECCEEEEEEHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC YVIYPNRIDFVD EEEECCEECCCC >Mature Secondary Structure SGDGGYEGESVLAPPVNIGAPEDLAPLKAKFVHYPGSQQLILWLPQDGYAGYSVLRIHG CCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEEC PGGKPIEDTALTSRLNGRVQILIDTWPWPPGPYHIEITHKEGWRHELSLEKLEEGIAPPP CCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCC PAPPVIEERSGPIVYRDSAGNILPDLDLELREREFARLAARFGRRLEFEGNARAGTIIYI CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEE EGDIRLRFYHEMCTHPVHFSIDIPPPEKWEAATGRPLAEREDILEFLAAETRRRQASRCN ECCEEEEEEHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC YVIYPNRIDFVD EEEECCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA