| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is aslA [H]
Identifier: 114798724
GI number: 114798724
Start: 2265873
End: 2267390
Strand: Direct
Name: aslA [H]
Synonym: HNE_2178
Alternate gene names: 114798724
Gene position: 2265873-2267390 (Clockwise)
Preceding gene: 114798176
Following gene: 114798245
Centisome position: 61.16
GC content: 56.98
Gene sequence:
>1518_bases ATGCGGACTCTATTGCTTCAAACATTTGGAAAAGGTGCGTTACTCAGCCTAACATTCGTGTTGCCAGGCTGCGTTCAGCC CCCTCCTCCCGCTCCCGATTCCGTCGCCGAAAAAGAGGCCGCTGCCTCCGAGCAGCCCAACATCGTACTGATTTTTGTTG ATGATATGGGCTATGCAGACATCGGCTCTTTCGGAAGCCCCATCGCCCGCACACCCAATCTCGACCGCCTGGCAATGGAG GGACAGAAGTGGACGAGCTTTTACGCGCCTGCGCCGGTATGCACTCCGAGCCGCGCCGGCCTGATGACGGGGCGGCTGGC CGTCAGATCCGGCATGGCTGGCTTGGTACAGGCCCGTCATGTGCTCTTCCCAACATCAACCGGCGGTCTCCCGCAGAGTG AAGTCACGATCGCCGAATTGCTCCAGCAGGAAGGTTATGTTTCGGCCGCATTCGGAAAATGGCATATGGGCCACCTTCCA GAATTTTTGCCTACCTCGCATGGCTTTCAATCCTATTTCGGCATCCCTTACAGTAACGATATGAATATGCCTGGCGGTGG CGAAACACCTTGGTCGATAGATCTCTTCTTTGAGCCACCTAATATTCAGAACTGGGACGTTCCCCTCATGCAGGATGAGG AAATCATCGAACGTCCCGCCGATCAGTTCACCCTCACCCAGCGTTACACGGAACGCGCAATCGAGTTCATGGAAACCAGC CACGCGGAAGGCCAACCCTTCTTCCTGTACCTAGCCCACAACATGCCGCACACGCCCCTGTTCACATCAGAGGGCTTCAC CGGCGTCAGCGCAGGCGGCGCCTATGGGGATGTCATTGAAGAACTCGACTGGAGCGTTGGCGAAATAGTCGACGCTCTTA AGGACATGAAGATAGAGAAGAACACGCTCGTCATCTTCACCTCGGACAATGGCCCATGGCTGGCGATGAAAACCCATAGC GGATCAGCCGGCATGTTGCGCGATGGCAAAGGTACAACCTGGGAAGGCGGTATGCGTGTGCCCGCAATCTTCTGGTGGCC CGGACAGATTGCGCCGCGCACCGTTACCGATCTTGGGTCAGCGCTTGATCTTATGCCGACATTCGCGGCCATTTCTGGCG CCCGTCTCCCGGAAGACCGCGTGTATGACGGGTTCGATCTCAGCCCTGCCCTCTTTTCTGAGGGGAGCAGCCCGCGTGAA ACACTCTACTATTACCGATTCACGGACGTTTTTGCCGTTCGCAAGGGCAAGTATAAGGCGCATTTCAGCACCTATGGCGC CTTCGGTGGCAGTGGCCGCACCGAACTGGAAACGCCTGAGCTTTATGACATTGAGGCAGACCCAAGCGAGCAGTTCAACA TTGCCGCGCAACACCCGGAGATCGTCATGGAGCTGAAGGTTCTGGCTGAGAAACAAGCCGCAAGCGTCGAGCCTGTCGAA AACCAGTTGGAACGCTATCCTCCGGGCGAAAAGCGAGGCGAAGAAGGTACGCGCCCATGGACCGCGGATAGCGAGTAG
Upstream 100 bases:
>100_bases TGTTAGAACGTTTTTTTCATAATTTAAATAGTTGATTTTTCTGTTTCGTGTTTTTTATGTGACCGGCATAGTAGGTTGAC AGACAGCGGAGGAATTCAAA
Downstream 100 bases:
>100_bases TCGTCCTTCGCGAAACTGAAAAAAAAGCCCGCCCGGACTGATCAACTCCGGGCGGGCTTATATTTGATCTGAAAGCGGCG CGCCTAGTCTTCGGGCCAGA
Product: sulfatase family protein
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MRTLLLQTFGKGALLSLTFVLPGCVQPPPPAPDSVAEKEAAASEQPNIVLIFVDDMGYADIGSFGSPIARTPNLDRLAME GQKWTSFYAPAPVCTPSRAGLMTGRLAVRSGMAGLVQARHVLFPTSTGGLPQSEVTIAELLQQEGYVSAAFGKWHMGHLP EFLPTSHGFQSYFGIPYSNDMNMPGGGETPWSIDLFFEPPNIQNWDVPLMQDEEIIERPADQFTLTQRYTERAIEFMETS HAEGQPFFLYLAHNMPHTPLFTSEGFTGVSAGGAYGDVIEELDWSVGEIVDALKDMKIEKNTLVIFTSDNGPWLAMKTHS GSAGMLRDGKGTTWEGGMRVPAIFWWPGQIAPRTVTDLGSALDLMPTFAAISGARLPEDRVYDGFDLSPALFSEGSSPRE TLYYYRFTDVFAVRKGKYKAHFSTYGAFGGSGRTELETPELYDIEADPSEQFNIAAQHPEIVMELKVLAEKQAASVEPVE NQLERYPPGEKRGEEGTRPWTADSE
Sequences:
>Translated_505_residues MRTLLLQTFGKGALLSLTFVLPGCVQPPPPAPDSVAEKEAAASEQPNIVLIFVDDMGYADIGSFGSPIARTPNLDRLAME GQKWTSFYAPAPVCTPSRAGLMTGRLAVRSGMAGLVQARHVLFPTSTGGLPQSEVTIAELLQQEGYVSAAFGKWHMGHLP EFLPTSHGFQSYFGIPYSNDMNMPGGGETPWSIDLFFEPPNIQNWDVPLMQDEEIIERPADQFTLTQRYTERAIEFMETS HAEGQPFFLYLAHNMPHTPLFTSEGFTGVSAGGAYGDVIEELDWSVGEIVDALKDMKIEKNTLVIFTSDNGPWLAMKTHS GSAGMLRDGKGTTWEGGMRVPAIFWWPGQIAPRTVTDLGSALDLMPTFAAISGARLPEDRVYDGFDLSPALFSEGSSPRE TLYYYRFTDVFAVRKGKYKAHFSTYGAFGGSGRTELETPELYDIEADPSEQFNIAAQHPEIVMELKVLAEKQAASVEPVE NQLERYPPGEKRGEEGTRPWTADSE >Mature_505_residues MRTLLLQTFGKGALLSLTFVLPGCVQPPPPAPDSVAEKEAAASEQPNIVLIFVDDMGYADIGSFGSPIARTPNLDRLAME GQKWTSFYAPAPVCTPSRAGLMTGRLAVRSGMAGLVQARHVLFPTSTGGLPQSEVTIAELLQQEGYVSAAFGKWHMGHLP EFLPTSHGFQSYFGIPYSNDMNMPGGGETPWSIDLFFEPPNIQNWDVPLMQDEEIIERPADQFTLTQRYTERAIEFMETS HAEGQPFFLYLAHNMPHTPLFTSEGFTGVSAGGAYGDVIEELDWSVGEIVDALKDMKIEKNTLVIFTSDNGPWLAMKTHS GSAGMLRDGKGTTWEGGMRVPAIFWWPGQIAPRTVTDLGSALDLMPTFAAISGARLPEDRVYDGFDLSPALFSEGSSPRE TLYYYRFTDVFAVRKGKYKAHFSTYGAFGGSGRTELETPELYDIEADPSEQFNIAAQHPEIVMELKVLAEKQAASVEPVE NQLERYPPGEKRGEEGTRPWTADSE
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI146229331, Length=445, Percent_Identity=44.0449438202247, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI146229329, Length=445, Percent_Identity=44.0449438202247, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI6005990, Length=445, Percent_Identity=44.0449438202247, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI146229324, Length=445, Percent_Identity=44.0449438202247, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI4503899, Length=506, Percent_Identity=35.5731225296443, Blast_Score=290, Evalue=2e-78, Organism=Homo sapiens, GI53831991, Length=519, Percent_Identity=37.1868978805395, Blast_Score=281, Evalue=1e-75, Organism=Homo sapiens, GI45430057, Length=462, Percent_Identity=37.2294372294372, Blast_Score=272, Evalue=5e-73, Organism=Homo sapiens, GI146229327, Length=370, Percent_Identity=41.6216216216216, Blast_Score=261, Evalue=9e-70, Organism=Homo sapiens, GI58743319, Length=530, Percent_Identity=31.3207547169811, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI31742482, Length=544, Percent_Identity=31.8014705882353, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI109389362, Length=502, Percent_Identity=26.6932270916335, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI59797060, Length=511, Percent_Identity=29.7455968688845, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI71852586, Length=309, Percent_Identity=33.0097087378641, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI38569405, Length=483, Percent_Identity=28.9855072463768, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI38569407, Length=377, Percent_Identity=31.8302387267904, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI71852584, Length=277, Percent_Identity=33.2129963898917, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI157266309, Length=149, Percent_Identity=42.9530201342282, Blast_Score=129, Evalue=7e-30, Organism=Escherichia coli, GI1790233, Length=497, Percent_Identity=29.5774647887324, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI87081924, Length=397, Percent_Identity=27.9596977329975, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1790112, Length=389, Percent_Identity=26.4781491002571, Blast_Score=102, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17559078, Length=285, Percent_Identity=33.3333333333333, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI115533416, Length=449, Percent_Identity=26.5033407572383, Blast_Score=132, Evalue=6e-31, Organism=Caenorhabditis elegans, GI115533418, Length=436, Percent_Identity=26.3761467889908, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24666175, Length=390, Percent_Identity=31.025641025641, Blast_Score=155, Evalue=7e-38, Organism=Drosophila melanogaster, GI281363223, Length=435, Percent_Identity=28.2758620689655, Blast_Score=155, Evalue=7e-38, Organism=Drosophila melanogaster, GI24666109, Length=411, Percent_Identity=30.9002433090024, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI281366397, Length=426, Percent_Identity=29.5774647887324, Blast_Score=152, Evalue=7e-37, Organism=Drosophila melanogaster, GI281366395, Length=426, Percent_Identity=29.5774647887324, Blast_Score=152, Evalue=7e-37, Organism=Drosophila melanogaster, GI24666163, Length=426, Percent_Identity=29.5774647887324, Blast_Score=152, Evalue=7e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 55505; Mature: 55505
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS00523 SULFATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLLLQTFGKGALLSLTFVLPGCVQPPPPAPDSVAEKEAAASEQPNIVLIFVDDMGYAD CCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCC IGSFGSPIARTPNLDRLAMEGQKWTSFYAPAPVCTPSRAGLMTGRLAVRSGMAGLVQARH CCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCHHHHHHHCE VLFPTSTGGLPQSEVTIAELLQQEGYVSAAFGKWHMGHLPEFLPTSHGFQSYFGIPYSND EEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCCCHHHHCCCCCCCC MNMPGGGETPWSIDLFFEPPNIQNWDVPLMQDEEIIERPADQFTLTQRYTERAIEFMETS CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHC HAEGQPFFLYLAHNMPHTPLFTSEGFTGVSAGGAYGDVIEELDWSVGEIVDALKDMKIEK CCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCEECC NTLVIFTSDNGPWLAMKTHSGSAGMLRDGKGTTWEGGMRVPAIFWWPGQIAPRTVTDLGS CEEEEEECCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHH ALDLMPTFAAISGARLPEDRVYDGFDLSPALFSEGSSPRETLYYYRFTDVFAVRKGKYKA HHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEEEECCCCEEE HFSTYGAFGGSGRTELETPELYDIEADPSEQFNIAAQHPEIVMELKVLAEKQAASVEPVE EEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHH NQLERYPPGEKRGEEGTRPWTADSE HHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTLLLQTFGKGALLSLTFVLPGCVQPPPPAPDSVAEKEAAASEQPNIVLIFVDDMGYAD CCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCC IGSFGSPIARTPNLDRLAMEGQKWTSFYAPAPVCTPSRAGLMTGRLAVRSGMAGLVQARH CCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCHHHHHHHCE VLFPTSTGGLPQSEVTIAELLQQEGYVSAAFGKWHMGHLPEFLPTSHGFQSYFGIPYSND EEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCCCHHHHCCCCCCCC MNMPGGGETPWSIDLFFEPPNIQNWDVPLMQDEEIIERPADQFTLTQRYTERAIEFMETS CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHC HAEGQPFFLYLAHNMPHTPLFTSEGFTGVSAGGAYGDVIEELDWSVGEIVDALKDMKIEK CCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCEECC NTLVIFTSDNGPWLAMKTHSGSAGMLRDGKGTTWEGGMRVPAIFWWPGQIAPRTVTDLGS CEEEEEECCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHH ALDLMPTFAAISGARLPEDRVYDGFDLSPALFSEGSSPRETLYYYRFTDVFAVRKGKYKA HHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEEEECCCCEEE HFSTYGAFGGSGRTELETPELYDIEADPSEQFNIAAQHPEIVMELKVLAEKQAASVEPVE EEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHH NQLERYPPGEKRGEEGTRPWTADSE HHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]