Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is fur [H]
Identifier: 114798658
GI number: 114798658
Start: 522238
End: 522657
Strand: Direct
Name: fur [H]
Synonym: HNE_0528
Alternate gene names: 114798658
Gene position: 522238-522657 (Clockwise)
Preceding gene: 114798860
Following gene: 114799592
Centisome position: 14.1
GC content: 58.57
Gene sequence:
>420_bases ATGGACAGACTAGAAAAACTCTGCATTGAGAAGGGCCTCCGCATGACGGAGCCTCGGCGGATCATTGCCCGCGTGCTTTC GGTGGCCGATGACCATCCTGACGCCGAAGAACTGCACCGGCGCGCCAATTCGCTGGACGCCTCGATTTCGCTCGCCACGG TCTATCGGACGGTCAAACTGTTCGAGGACGCCGGCATCATCCAGGCGCATGACTTCCGTGATGGCCGCGCCCGGTATGAA GAAATGCCGGCCGAGCACCACGACCATCTGATCGACATCAAGACAGGGCAGGTGGTGGAGTTCCATTCCGAAGAGATCGA AAAGCTTCAGGAAGAAATCGCCCGCAAGCTTGGCTACCGGCTGGTCGATCACCGGCTGGAGCTTTACGGCGTGCCGCTCA ACGAAAAAGACAAATCCTGA
Upstream 100 bases:
>100_bases CTCGCCTGGTCCCGGACGCTGGATTTCTTCGGCAAGCACCTGCGCGGCAGCTGACAAGGTTGAACTGGACTTTCCCGCTG GGCGAGGGCATTTAGGGACC
Downstream 100 bases:
>100_bases CGTCAAGGCCGGGCGCCATCCAGGCGCCGCCAGAAAGCAAACGGCCCCGTCAGACTGACGGGGCCGTTTTCGTTTCGCGG AAAGGCGCGTGCTTAGAACT
Product: ferric uptake regulation protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MDRLEKLCIEKGLRMTEPRRIIARVLSVADDHPDAEELHRRANSLDASISLATVYRTVKLFEDAGIIQAHDFRDGRARYE EMPAEHHDHLIDIKTGQVVEFHSEEIEKLQEEIARKLGYRLVDHRLELYGVPLNEKDKS
Sequences:
>Translated_139_residues MDRLEKLCIEKGLRMTEPRRIIARVLSVADDHPDAEELHRRANSLDASISLATVYRTVKLFEDAGIIQAHDFRDGRARYE EMPAEHHDHLIDIKTGQVVEFHSEEIEKLQEEIARKLGYRLVDHRLELYGVPLNEKDKS >Mature_139_residues MDRLEKLCIEKGLRMTEPRRIIARVLSVADDHPDAEELHRRANSLDASISLATVYRTVKLFEDAGIIQAHDFRDGRARYE EMPAEHHDHLIDIKTGQVVEFHSEEIEKLQEEIARKLGYRLVDHRLELYGVPLNEKDKS
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=120, Percent_Identity=45.8333333333333, Blast_Score=103, Evalue=6e-24,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16169; Mature: 16169
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRLEKLCIEKGLRMTEPRRIIARVLSVADDHPDAEELHRRANSLDASISLATVYRTVKL CCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH FEDAGIIQAHDFRDGRARYEEMPAEHHDHLIDIKTGQVVEFHSEEIEKLQEEIARKLGYR HHCCCCEEECCCCCHHHHHHHCCHHHCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHH LVDHRLELYGVPLNEKDKS HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDRLEKLCIEKGLRMTEPRRIIARVLSVADDHPDAEELHRRANSLDASISLATVYRTVKL CCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHH FEDAGIIQAHDFRDGRARYEEMPAEHHDHLIDIKTGQVVEFHSEEIEKLQEEIARKLGYR HHCCCCEEECCCCCHHHHHHHCCHHHCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHH LVDHRLELYGVPLNEKDKS HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9835040 [H]