Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is dut [H]
Identifier: 114798633
GI number: 114798633
Start: 3430329
End: 3430784
Strand: Reverse
Name: dut [H]
Synonym: HNE_3267
Alternate gene names: 114798633
Gene position: 3430784-3430329 (Counterclockwise)
Preceding gene: 114799868
Following gene: 114797838
Centisome position: 92.6
GC content: 66.67
Gene sequence:
>456_bases ATGACCGATGTGACCGTTCAAGTGCTTCCGCTGCCCCATTTTGCCGGGCTTGATCTTCCCGCTTACGAGACGGCGGGCTC TGCCGGCATGGATGTCCGCGCGGCGGTGCCAGATCGCGAACCGGTTATTCTGGCCCCCGGCCAGCGCGCCATGGTGCCCA CCGGTCTTTCGGTCGCGATTCCCGAAGGCTACGAAATCCAGGTCCGCCCGCGCTCTGGCCTTGCCGCCAAGCACGGCCTT ACCTGCCTCAACACGCCCGGCACGATCGACAGCGATTATCGCGGCGAAATCAAGGTCATCCTGATCAACCTCGGCGCTGA GCCCTTCACCATCCAGCGCGGCGAGCGGATTGCCCAGCTCGTGCTGGCCCCGGTCACGCGGCTTGCCTGGACTGAGGTTG AGGCGCTCGGCGAGACCGCGCGCGGGGCAGGTGGCTTCGGCTCCACAGGCCGCTGA
Upstream 100 bases:
>100_bases GATTGCCGAGGCCTTTGCTGGCGATGCAGACGGCCTGTCCCTCGCGGCGGAGTAAGCTCCCCGCTTGACTCCTCCCCAGA GTCTCCCCACCCGTCGCGTC
Downstream 100 bases:
>100_bases CGGACCGCTTATGGGGCGTCCTCTCCAAAAATAATGGCCCCCGCCGTTCAATTTTTCTTGAACGCGAGCCCATCTTCCCC ACATATTGAATATCAATAAG
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTDVTVQVLPLPHFAGLDLPAYETAGSAGMDVRAAVPDREPVILAPGQRAMVPTGLSVAIPEGYEIQVRPRSGLAAKHGL TCLNTPGTIDSDYRGEIKVILINLGAEPFTIQRGERIAQLVLAPVTRLAWTEVEALGETARGAGGFGSTGR
Sequences:
>Translated_151_residues MTDVTVQVLPLPHFAGLDLPAYETAGSAGMDVRAAVPDREPVILAPGQRAMVPTGLSVAIPEGYEIQVRPRSGLAAKHGL TCLNTPGTIDSDYRGEIKVILINLGAEPFTIQRGERIAQLVLAPVTRLAWTEVEALGETARGAGGFGSTGR >Mature_150_residues TDVTVQVLPLPHFAGLDLPAYETAGSAGMDVRAAVPDREPVILAPGQRAMVPTGLSVAIPEGYEIQVRPRSGLAAKHGLT CLNTPGTIDSDYRGEIKVILINLGAEPFTIQRGERIAQLVLAPVTRLAWTEVEALGETARGAGGFGSTGR
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=132, Percent_Identity=42.4242424242424, Blast_Score=103, Evalue=8e-23, Organism=Homo sapiens, GI4503423, Length=132, Percent_Identity=42.4242424242424, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI70906441, Length=132, Percent_Identity=42.4242424242424, Blast_Score=100, Evalue=9e-22, Organism=Escherichia coli, GI1790071, Length=134, Percent_Identity=47.7611940298507, Blast_Score=120, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71988561, Length=150, Percent_Identity=44.6666666666667, Blast_Score=117, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6319729, Length=153, Percent_Identity=40.5228758169935, Blast_Score=97, Evalue=1e-21, Organism=Drosophila melanogaster, GI24583610, Length=131, Percent_Identity=38.1679389312977, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI19921126, Length=131, Percent_Identity=38.1679389312977, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15856; Mature: 15725
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVTVQVLPLPHFAGLDLPAYETAGSAGMDVRAAVPDREPVILAPGQRAMVPTGLSVAI CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEECCCCCEEEC PEGYEIQVRPRSGLAAKHGLTCLNTPGTIDSDYRGEIKVILINLGAEPFTIQRGERIAQL CCCCEEEEECCCCCCHHCCCEEECCCCCCCCCCCCEEEEEEEECCCCCEEECCHHHHHHH VLAPVTRLAWTEVEALGETARGAGGFGSTGR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TDVTVQVLPLPHFAGLDLPAYETAGSAGMDVRAAVPDREPVILAPGQRAMVPTGLSVAI CCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEECCCCCEEEC PEGYEIQVRPRSGLAAKHGLTCLNTPGTIDSDYRGEIKVILINLGAEPFTIQRGERIAQL CCCCEEEEECCCCCCHHCCCEEECCCCCCCCCCCCEEEEEEEECCCCCEEECCHHHHHHH VLAPVTRLAWTEVEALGETARGAGGFGSTGR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA