Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is yghU [H]
Identifier: 114798543
GI number: 114798543
Start: 311781
End: 312653
Strand: Direct
Name: yghU [H]
Synonym: HNE_0315
Alternate gene names: 114798543
Gene position: 311781-312653 (Clockwise)
Preceding gene: 114799329
Following gene: 114797156
Centisome position: 8.42
GC content: 62.54
Gene sequence:
>873_bases ATGTCAGATTCTGATTACATCCCGCCCAAGGTCTGGACCTGGAACAAGGATGCGGGCGGGCGCTTCGCCAACATCAACCG GCCCATTGCGGGCCCGACGCAGGAAAAAGCGCTGCCCGTCGGCAAGCATCCCCTGCAGCTCTATTCGCTGGGCACGCCCA ACGGGGTCAAAGTCACGGTCATGCTGGAGGAGCTTCTGGCGCTGGGCTATTCGGGCGCAGAATATGATGCCTGGCTGATC AATATCGGGCAGGGGGATCAGTTCACCTCCGGCTTCGTCGACATCAACCCCAACTCGAAAATCCCCGCGCTGCTCGACCG GTCGGTCGATTCCGGCGTGCGCGTGTTCGAGTCCGGCGCCATCCTGATGTACCTCGCCGAGAAGTTCGGCGCCTTCCTGC CCAAATCCCAGCCCAAGCGCGCCGAAGCGCTCAGCTGGCTGTTCTGGCAGATGGGCTCGGCGCCTTTCCTCGGTGGCGGC TTTGGCCACTTCTACGCCTACGCCCCGGTGAAGATCCAATACGCCATCGACCGCTATGCGATGGAAACCAAGCGCCAGAT GGACGTGCTCGACCGCCACCTCGCAATCCACGAATACATGGCCGGCGACGAATACACGATTGCCGACATGGCCATCTGGC CATGGTACGGCGCCCTCGCGCAGGGCGTCCTCTATGAGGCCGGCGAATTCCTGGAGGTCGATAGCTACAAGAACGTCCAG CGCTGGACGACGCAGATCGCCGACCGCCCCGCCGTCAAGCGTGGCCGGATGGTCAACCGCACTTTCGGCAAGCCCGAGAG CCAGCTTCTGGAGCGTCACGATGCCAGCGACTTCGACACGAAGACGCAGGACAAGCTTCAGCCAGGTAGCTGA
Upstream 100 bases:
>100_bases GCAAGGGTGGTTTTCCGGCCGGACGCTTTGCGCCTTGTAAAATGCGGTTTAAGTCAAACCTTAAGACGGCAAAATGGCTC TCACCTCGAAGGAAACGCTC
Downstream 100 bases:
>100_bases CGCGTGCTCGGGCTGTTCGGGAAAAAGAAAGCCGGGTTTGATCTCACCGAAGGCAACCGCCATGTGATGCCGGGCCTTGC CCTGCTCGAAGCGGGCGACG
Product: glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSDSDYIPPKVWTWNKDAGGRFANINRPIAGPTQEKALPVGKHPLQLYSLGTPNGVKVTVMLEELLALGYSGAEYDAWLI NIGQGDQFTSGFVDINPNSKIPALLDRSVDSGVRVFESGAILMYLAEKFGAFLPKSQPKRAEALSWLFWQMGSAPFLGGG FGHFYAYAPVKIQYAIDRYAMETKRQMDVLDRHLAIHEYMAGDEYTIADMAIWPWYGALAQGVLYEAGEFLEVDSYKNVQ RWTTQIADRPAVKRGRMVNRTFGKPESQLLERHDASDFDTKTQDKLQPGS
Sequences:
>Translated_290_residues MSDSDYIPPKVWTWNKDAGGRFANINRPIAGPTQEKALPVGKHPLQLYSLGTPNGVKVTVMLEELLALGYSGAEYDAWLI NIGQGDQFTSGFVDINPNSKIPALLDRSVDSGVRVFESGAILMYLAEKFGAFLPKSQPKRAEALSWLFWQMGSAPFLGGG FGHFYAYAPVKIQYAIDRYAMETKRQMDVLDRHLAIHEYMAGDEYTIADMAIWPWYGALAQGVLYEAGEFLEVDSYKNVQ RWTTQIADRPAVKRGRMVNRTFGKPESQLLERHDASDFDTKTQDKLQPGS >Mature_289_residues SDSDYIPPKVWTWNKDAGGRFANINRPIAGPTQEKALPVGKHPLQLYSLGTPNGVKVTVMLEELLALGYSGAEYDAWLIN IGQGDQFTSGFVDINPNSKIPALLDRSVDSGVRVFESGAILMYLAEKFGAFLPKSQPKRAEALSWLFWQMGSAPFLGGGF GHFYAYAPVKIQYAIDRYAMETKRQMDVLDRHLAIHEYMAGDEYTIADMAIWPWYGALAQGVLYEAGEFLEVDSYKNVQR WTTQIADRPAVKRGRMVNRTFGKPESQLLERHDASDFDTKTQDKLQPGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=287, Percent_Identity=69.6864111498258, Blast_Score=432, Evalue=1e-123, Organism=Escherichia coli, GI1788640, Length=213, Percent_Identity=41.7840375586854, Blast_Score=152, Evalue=2e-38, Organism=Escherichia coli, GI87081789, Length=179, Percent_Identity=31.2849162011173, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324100, Length=259, Percent_Identity=28.957528957529, Blast_Score=96, Evalue=9e-21, Organism=Drosophila melanogaster, GI28571670, Length=178, Percent_Identity=32.0224719101124, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI17864592, Length=201, Percent_Identity=31.3432835820896, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI85725204, Length=175, Percent_Identity=33.1428571428571, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI17737923, Length=175, Percent_Identity=33.1428571428571, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI17864598, Length=177, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI45549270, Length=192, Percent_Identity=29.6875, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17864594, Length=193, Percent_Identity=29.5336787564767, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 32484; Mature: 32353
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSDYIPPKVWTWNKDAGGRFANINRPIAGPTQEKALPVGKHPLQLYSLGTPNGVKVTV CCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEEEH MLEELLALGYSGAEYDAWLINIGQGDQFTSGFVDINPNSKIPALLDRSVDSGVRVFESGA HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCEEHHCCC ILMYLAEKFGAFLPKSQPKRAEALSWLFWQMGSAPFLGGGFGHFYAYAPVKIQYAIDRYA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCEEEEEHHHHHH METKRQMDVLDRHLAIHEYMAGDEYTIADMAIWPWYGALAQGVLYEAGEFLEVDSYKNVQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEHEEHHHHHHHHHHHHHHHCCCEEECCCCCHHH RWTTQIADRPAVKRGRMVNRTFGKPESQLLERHDASDFDTKTQDKLQPGS HHHHHHHCCCHHHHCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDSDYIPPKVWTWNKDAGGRFANINRPIAGPTQEKALPVGKHPLQLYSLGTPNGVKVTV CCCCCCCCCEEEECCCCCCCEEECCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCEEEH MLEELLALGYSGAEYDAWLINIGQGDQFTSGFVDINPNSKIPALLDRSVDSGVRVFESGA HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCEEHHCCC ILMYLAEKFGAFLPKSQPKRAEALSWLFWQMGSAPFLGGGFGHFYAYAPVKIQYAIDRYA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCEEEEEHHHHHH METKRQMDVLDRHLAIHEYMAGDEYTIADMAIWPWYGALAQGVLYEAGEFLEVDSYKNVQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEHEEHHHHHHHHHHHHHHHCCCEEECCCCCHHH RWTTQIADRPAVKRGRMVNRTFGKPESQLLERHDASDFDTKTQDKLQPGS HHHHHHHCCCHHHHCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]