Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is exuT [H]
Identifier: 114798525
GI number: 114798525
Start: 962191
End: 963690
Strand: Reverse
Name: exuT [H]
Synonym: HNE_0948
Alternate gene names: 114798525
Gene position: 963690-962191 (Counterclockwise)
Preceding gene: 114797089
Following gene: 114798237
Centisome position: 26.01
GC content: 61.27
Gene sequence:
>1500_bases ATGACCGACGCCGCCACCCCTAGCCAGACAACCACCGAAGCCGTTCCGGGTTACAAAACCGGATTCGGAACCCCGCTTTA CCGCGGCTATGTTTTGTCTTCGCTGCTTGTTGTTTACATCTTCAATTTCATCGACCGCTCGATTTTCGGTATCCTGACCG AGCCGATGAAACTCTCCCTCCAGCTCGAAGACTGGCATATGGGATTGCTCGGCGGCCTCGCCTTTGCGATTTTCTACACG ACGCTGGGTATCCCGATTGCGCGCGTTGCCGAACGCCGCAGCCGGATGATGATCATTGTGATCTCGCTGACCCTGTGGAG CCTGATGACGGTGCTCTGCGGCTTTGCGACGAGCTTCATGACGCTGTTCATTTTCCGCCTGCTCGTAGGCGTAGGCGAGG CGGGGTGTACGCCGCCGGCACAGTCTGTGATCGCCGATTATTTCAAGCCGACAAGCCGCGCGACGGCCGCTTCAATCTAT GCGCTCGGCGTTCCGCTGGGCGGGATGCTGGCCGGTCTCGCCGCAGGCCCGATCAATGATTATGTGACCGGCGAGAACGT CTACAATCTCTTCGGCTCATGGGGCTGGACCTGGGCGCAGGGGCTGGTGGACTGGAATAGCCTGGAAGGCTGGCGCATCG CGTTTATCGCCGTTGGCCTGCCGGGCGTTCTGTTTGCCCTCATCCTATTCTTCACCGTGAAAGAGCCACCCCGCGGATAT TCTGATCCTCCGGGCGCGCCGCGCAAAGCGGTACCTGATGGCTTCGGCACAGTGCTGAAGGATCTGATGAAGAAGCCGAC CTATGTGCATGTTGTGGCCGGCGCGGCGATCGCCTCCTTTGCCGGTTACGGCGTTGCGGCTTTCTCCACCTCCTTTCTGC TGCGCACCCACGGGCTGACGCTGACCGAAGCGGCGTTGATCTTCTCGCTGGTTCTGGGCGTGATGGCGGCGATTGGCGTG TTCCTCTCGGGCTTCCTCGCGGACAGGCTGTCCGTGCGGTATCCCACAGCGCTGTCCTGGATGCCGGCGCTGGGCATGGG GCTTTCCGTGCCGCTTTACTGGCTCGGCTATCTCAGCCCCACCGTGCCGTTGATGATTCCGCCGCTGATGCTGGCGGCCA CGCTGCACTACTTCTATCTCGGCCCAATGTATGCGGTCTCGGCAGGGGTTGTGGACAGCCGCACACGCGCAACGGCCGTG GCGATCACTCTGTTTGCGGTGAACCTGATCGGCATCGGCCTTGGCCCCACGCTGATCGGCTTCCTCTCCACCGGCCTCAA GACGATGATGTTGGATGGCAATACGATCGGCCTCACCCTGCAGATGTGTAAGGACGTCACCGTGCTCGCCGCTGACCAGG CCGCTGCCTGTCGCGACGCCGATGCCCGCGGCCTGCAATGGTCGATCATCATCTTTGCTTCGCTCTATGGCTGGGCGGCG ATCCACTACCTGCTCGCCGGCAAGACACTTAGCCGTGACATGCTCTCCAAAACTGCGTAA
Upstream 100 bases:
>100_bases GCGTTCTATTTCCTCGCCTCCCGCACCTTCCTGAAGGATCGCTGGAGCCCCGCCGCGGATTGAATTTCGCAATTCTTGCC TGACTGTCGTGGAGACCCGC
Downstream 100 bases:
>100_bases GGGCGCCGCCTATGGCGGTATATACGCAAGTTTCTGATGAAGCCCTCGCAGGGTTCCTCGCCGGGTATGATCTCGGCGAG GCGCTTGCGTTCAAGGGCAT
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MTDAATPSQTTTEAVPGYKTGFGTPLYRGYVLSSLLVVYIFNFIDRSIFGILTEPMKLSLQLEDWHMGLLGGLAFAIFYT TLGIPIARVAERRSRMMIIVISLTLWSLMTVLCGFATSFMTLFIFRLLVGVGEAGCTPPAQSVIADYFKPTSRATAASIY ALGVPLGGMLAGLAAGPINDYVTGENVYNLFGSWGWTWAQGLVDWNSLEGWRIAFIAVGLPGVLFALILFFTVKEPPRGY SDPPGAPRKAVPDGFGTVLKDLMKKPTYVHVVAGAAIASFAGYGVAAFSTSFLLRTHGLTLTEAALIFSLVLGVMAAIGV FLSGFLADRLSVRYPTALSWMPALGMGLSVPLYWLGYLSPTVPLMIPPLMLAATLHYFYLGPMYAVSAGVVDSRTRATAV AITLFAVNLIGIGLGPTLIGFLSTGLKTMMLDGNTIGLTLQMCKDVTVLAADQAAACRDADARGLQWSIIIFASLYGWAA IHYLLAGKTLSRDMLSKTA
Sequences:
>Translated_499_residues MTDAATPSQTTTEAVPGYKTGFGTPLYRGYVLSSLLVVYIFNFIDRSIFGILTEPMKLSLQLEDWHMGLLGGLAFAIFYT TLGIPIARVAERRSRMMIIVISLTLWSLMTVLCGFATSFMTLFIFRLLVGVGEAGCTPPAQSVIADYFKPTSRATAASIY ALGVPLGGMLAGLAAGPINDYVTGENVYNLFGSWGWTWAQGLVDWNSLEGWRIAFIAVGLPGVLFALILFFTVKEPPRGY SDPPGAPRKAVPDGFGTVLKDLMKKPTYVHVVAGAAIASFAGYGVAAFSTSFLLRTHGLTLTEAALIFSLVLGVMAAIGV FLSGFLADRLSVRYPTALSWMPALGMGLSVPLYWLGYLSPTVPLMIPPLMLAATLHYFYLGPMYAVSAGVVDSRTRATAV AITLFAVNLIGIGLGPTLIGFLSTGLKTMMLDGNTIGLTLQMCKDVTVLAADQAAACRDADARGLQWSIIIFASLYGWAA IHYLLAGKTLSRDMLSKTA >Mature_498_residues TDAATPSQTTTEAVPGYKTGFGTPLYRGYVLSSLLVVYIFNFIDRSIFGILTEPMKLSLQLEDWHMGLLGGLAFAIFYTT LGIPIARVAERRSRMMIIVISLTLWSLMTVLCGFATSFMTLFIFRLLVGVGEAGCTPPAQSVIADYFKPTSRATAASIYA LGVPLGGMLAGLAAGPINDYVTGENVYNLFGSWGWTWAQGLVDWNSLEGWRIAFIAVGLPGVLFALILFFTVKEPPRGYS DPPGAPRKAVPDGFGTVLKDLMKKPTYVHVVAGAAIASFAGYGVAAFSTSFLLRTHGLTLTEAALIFSLVLGVMAAIGVF LSGFLADRLSVRYPTALSWMPALGMGLSVPLYWLGYLSPTVPLMIPPLMLAATLHYFYLGPMYAVSAGVVDSRTRATAVA ITLFAVNLIGIGLGPTLIGFLSTGLKTMMLDGNTIGLTLQMCKDVTVLAADQAAACRDADARGLQWSIIIFASLYGWAAI HYLLAGKTLSRDMLSKTA
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI215490096, Length=484, Percent_Identity=25, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI14042968, Length=484, Percent_Identity=25, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI215490100, Length=442, Percent_Identity=26.0180995475113, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI185136021, Length=444, Percent_Identity=23.6486486486486, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI87082320, Length=423, Percent_Identity=25.0591016548463, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17539092, Length=429, Percent_Identity=25.4079254079254, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI193209775, Length=432, Percent_Identity=25.6944444444444, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71992409, Length=429, Percent_Identity=24.9417249417249, Blast_Score=69, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17557872, Length=309, Percent_Identity=22.6537216828479, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24654041, Length=433, Percent_Identity=23.5565819861432, Blast_Score=93, Evalue=5e-19, Organism=Drosophila melanogaster, GI24654037, Length=433, Percent_Identity=23.5565819861432, Blast_Score=93, Evalue=5e-19, Organism=Drosophila melanogaster, GI17864456, Length=429, Percent_Identity=24.2424242424242, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24654039, Length=429, Percent_Identity=24.2424242424242, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24640209, Length=370, Percent_Identity=22.1621621621622, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654044, Length=265, Percent_Identity=24.1509433962264, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 53385; Mature: 53253
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAATPSQTTTEAVPGYKTGFGTPLYRGYVLSSLLVVYIFNFIDRSIFGILTEPMKLSL CCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE QLEDWHMGLLGGLAFAIFYTTLGIPIARVAERRSRMMIIVISLTLWSLMTVLCGFATSFM EECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH TLFIFRLLVGVGEAGCTPPAQSVIADYFKPTSRATAASIYALGVPLGGMLAGLAAGPIND HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCC YVTGENVYNLFGSWGWTWAQGLVDWNSLEGWRIAFIAVGLPGVLFALILFFTVKEPPRGY CCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCC SDPPGAPRKAVPDGFGTVLKDLMKKPTYVHVVAGAAIASFAGYGVAAFSTSFLLRTHGLT CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCH LTEAALIFSLVLGVMAAIGVFLSGFLADRLSVRYPTALSWMPALGMGLSVPLYWLGYLSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHCC TVPLMIPPLMLAATLHYFYLGPMYAVSAGVVDSRTRATAVAITLFAVNLIGIGLGPTLIG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH FLSTGLKTMMLDGNTIGLTLQMCKDVTVLAADQAAACRDADARGLQWSIIIFASLYGWAA HHHHCCCEEEECCCEEEEEHHHHCCCEEEECCCHHHHCCCCCCCCEEHHHHHHHHHHHHH IHYLLAGKTLSRDMLSKTA HHHHHHCCHHHHHHHHHCC >Mature Secondary Structure TDAATPSQTTTEAVPGYKTGFGTPLYRGYVLSSLLVVYIFNFIDRSIFGILTEPMKLSL CCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE QLEDWHMGLLGGLAFAIFYTTLGIPIARVAERRSRMMIIVISLTLWSLMTVLCGFATSFM EECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHH TLFIFRLLVGVGEAGCTPPAQSVIADYFKPTSRATAASIYALGVPLGGMLAGLAAGPIND HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCC YVTGENVYNLFGSWGWTWAQGLVDWNSLEGWRIAFIAVGLPGVLFALILFFTVKEPPRGY CCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCC SDPPGAPRKAVPDGFGTVLKDLMKKPTYVHVVAGAAIASFAGYGVAAFSTSFLLRTHGLT CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCH LTEAALIFSLVLGVMAAIGVFLSGFLADRLSVRYPTALSWMPALGMGLSVPLYWLGYLSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHCC TVPLMIPPLMLAATLHYFYLGPMYAVSAGVVDSRTRATAVAITLFAVNLIGIGLGPTLIG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH FLSTGLKTMMLDGNTIGLTLQMCKDVTVLAADQAAACRDADARGLQWSIIIFASLYGWAA HHHHCCCEEEECCCEEEEEHHHHCCCEEEECCCHHHHCCCCCCCCEEHHHHHHHHHHHHH IHYLLAGKTLSRDMLSKTA HHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]