| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is iolE [H]
Identifier: 114798293
GI number: 114798293
Start: 2276323
End: 2277231
Strand: Direct
Name: iolE [H]
Synonym: HNE_2184
Alternate gene names: 114798293
Gene position: 2276323-2277231 (Clockwise)
Preceding gene: 114798854
Following gene: 114797478
Centisome position: 61.44
GC content: 58.2
Gene sequence:
>909_bases ATGCGTTTCGGAGCAAGCCCGATTGCCTGGTCAAATGACGACATGCCAGAACTCGGCGCAGACACCTCACTGGACACCTG CCTGACAGACATCCGGGAGACTGGCTATTCAGGCGCCGAACTCGGCCGGAAGTTTCCGCGCAACAGCCAAGCGCTTCTGC CGATCCTCAAACAACACCAGTTGTCCCTCGTCGGCGGCTGGTATTCCGGTCACCTGTTGACACGGTCTGCTGCTGAGGAA ATCGAGGCCCTTCAGGACCACATGGCGCTTCTCAAGGCCTGCGGCTCGGAAGTGTTCATCTTTGCCGAGTGCAGCAATGC CATTCACGGCAGCATGGATCTGGGCCTATCCCAAAAGCCATACCTGAGCCCACCCCAGTGGCGGGAGTTCGGAACGCGCC TCACCGAAGTGGCCGATTACATTGCGGCGCAGGGCTTCCGGTTTGCCTATCACCATCACACAGGGACCGTGGTAGAAACC AGCACTGATCTGGAATGTTTCCTTGCTGAAACTGGCCCATCCGTAGGCCTCACACTCGACACCGGCCATGCGTTCGTTGG CGGCATTGATTGCCCGGATCTGATCCGGAAACATCCCGGCCGCATTGCCCACGTACACTGCAAGGATGTGCGCCTTGGCA TCTTTGAAAACATCCGGCAGAACGACGCCAGCTTCCTGACGGGCGTGCTCGCTGGAATGTTTACCGTCCCCGGCGATGGT GACATCGACTACACGCCCATCTTCGGCGCATTGGCAGACATTCGCTACGACAACTGGATCATAATCGAGGCCGAGCAGGA TCCCGCCAAGGCCGATCCCCGGACTTATGCGAGCATGGGCCTCGCCCATGTGAAAAACTGTATCGAGCGTAGTTATAACA AGGACAAAGTGGAGTCGGCTGATGCCTGA
Upstream 100 bases:
>100_bases CGCCGTCCCGGAAGTCTCGGGAAGCGCGGCTGTCCGTGAAGCCTTTGAAGCCTACCGCGCTGCCACACAAAAACAATTCG TAGACTGACAGGAGTAACTC
Downstream 100 bases:
>100_bases TCTGCGCGTCAAAAGCGGGACACCAGCCAGCGATGGCTGCGTCCTATCTATCACCCCCGAATCGGCAGGTTGGGACCATG TGGGCTTCGCTGTTCACAGG
Product: 2-keto-myo-inositol dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRFGASPIAWSNDDMPELGADTSLDTCLTDIRETGYSGAELGRKFPRNSQALLPILKQHQLSLVGGWYSGHLLTRSAAEE IEALQDHMALLKACGSEVFIFAECSNAIHGSMDLGLSQKPYLSPPQWREFGTRLTEVADYIAAQGFRFAYHHHTGTVVET STDLECFLAETGPSVGLTLDTGHAFVGGIDCPDLIRKHPGRIAHVHCKDVRLGIFENIRQNDASFLTGVLAGMFTVPGDG DIDYTPIFGALADIRYDNWIIIEAEQDPAKADPRTYASMGLAHVKNCIERSYNKDKVESADA
Sequences:
>Translated_302_residues MRFGASPIAWSNDDMPELGADTSLDTCLTDIRETGYSGAELGRKFPRNSQALLPILKQHQLSLVGGWYSGHLLTRSAAEE IEALQDHMALLKACGSEVFIFAECSNAIHGSMDLGLSQKPYLSPPQWREFGTRLTEVADYIAAQGFRFAYHHHTGTVVET STDLECFLAETGPSVGLTLDTGHAFVGGIDCPDLIRKHPGRIAHVHCKDVRLGIFENIRQNDASFLTGVLAGMFTVPGDG DIDYTPIFGALADIRYDNWIIIEAEQDPAKADPRTYASMGLAHVKNCIERSYNKDKVESADA >Mature_302_residues MRFGASPIAWSNDDMPELGADTSLDTCLTDIRETGYSGAELGRKFPRNSQALLPILKQHQLSLVGGWYSGHLLTRSAAEE IEALQDHMALLKACGSEVFIFAECSNAIHGSMDLGLSQKPYLSPPQWREFGTRLTEVADYIAAQGFRFAYHHHTGTVVET STDLECFLAETGPSVGLTLDTGHAFVGGIDCPDLIRKHPGRIAHVHCKDVRLGIFENIRQNDASFLTGVLAGMFTVPGDG DIDYTPIFGALADIRYDNWIIIEAEQDPAKADPRTYASMGLAHVKNCIERSYNKDKVESADA
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 33076; Mature: 33076
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFGASPIAWSNDDMPELGADTSLDTCLTDIRETGYSGAELGRKFPRNSQALLPILKQHQ CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHH LSLVGGWYSGHLLTRSAAEEIEALQDHMALLKACGSEVFIFAECSNAIHGSMDLGLSQKP HEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC YLSPPQWREFGTRLTEVADYIAAQGFRFAYHHHTGTVVETSTDLECFLAETGPSVGLTLD CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEEEECCCCCEEEEEE TGHAFVGGIDCPDLIRKHPGRIAHVHCKDVRLGIFENIRQNDASFLTGVLAGMFTVPGDG CCCEEECCCCCHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC DIDYTPIFGALADIRYDNWIIIEAEQDPAKADPRTYASMGLAHVKNCIERSYNKDKVESA CCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC DA CC >Mature Secondary Structure MRFGASPIAWSNDDMPELGADTSLDTCLTDIRETGYSGAELGRKFPRNSQALLPILKQHQ CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHH LSLVGGWYSGHLLTRSAAEEIEALQDHMALLKACGSEVFIFAECSNAIHGSMDLGLSQKP HEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC YLSPPQWREFGTRLTEVADYIAAQGFRFAYHHHTGTVVETSTDLECFLAETGPSVGLTLD CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCEEEEECCCCCEEEEEE TGHAFVGGIDCPDLIRKHPGRIAHVHCKDVRLGIFENIRQNDASFLTGVLAGMFTVPGDG CCCEEECCCCCHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC DIDYTPIFGALADIRYDNWIIIEAEQDPAKADPRTYASMGLAHVKNCIERSYNKDKVESA CCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC DA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]