Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is yaiI [C]
Identifier: 114798243
GI number: 114798243
Start: 186634
End: 187098
Strand: Direct
Name: yaiI [C]
Synonym: HNE_0201
Alternate gene names: 114798243
Gene position: 186634-187098 (Clockwise)
Preceding gene: 114799280
Following gene: 114797270
Centisome position: 5.04
GC content: 65.81
Gene sequence:
>465_bases ATGAGCGTACAAATCCTGGTCGATGGCGATGCGTGTCCGGTGAAGGACGAGATCTACATGGTGGCGCTGCGCCATCAGGT GCCGGTGAGCGTGGTGTCCAACTCATACTTCCGTATTCCGGAGCATCCGCTGATCTCCCGCAAGATCGTCAGTGACGGGT TTGACGCGGCCGATGACTGGATTGCGGAGCAGGCAAGCGCCGCCTCGATTGTCGTGACAGCGGATATTCCGCTGGCCGAC CGTTGCCTGAAGGCCGGCGCGCGGGTGCTGGGGCCCTCCGGCAAGCCGTTTACAGACGACTCCATCGGCACGGCGCTGGC CACACGGTCGATCATGGCGGACCGGCGGGTCGGTGTTGCCGGTATCGGGGCAGGTGGGCCAGCCCCCTTCAGCAAGGCCG ACCGCTCGCGCTTCCTGTCCGCGCTGGATGCGGCGATTGTGGCGGCCAAGCGAGCGGCGGGCTAG
Upstream 100 bases:
>100_bases CGACCGAGCCGGGCGTTGCGATGCCCGAACTGGGCCGCAGCGTGAGTGATCCCGAAAGCCTCGCCTTGATCCGCGAATGG ATTGGCGCGATGGAGACGCC
Downstream 100 bases:
>100_bases GCGCCTTTGACTTGTGCTTAATTCCGGTCGTGCTAAGGGCCGATCCATGAACCAGATCACCCTCCATAAGGGCGACCTTC CCGAAGGTCTGAGCCTTGGC
Product: YaiI/YqxD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSVQILVDGDACPVKDEIYMVALRHQVPVSVVSNSYFRIPEHPLISRKIVSDGFDAADDWIAEQASAASIVVTADIPLAD RCLKAGARVLGPSGKPFTDDSIGTALATRSIMADRRVGVAGIGAGGPAPFSKADRSRFLSALDAAIVAAKRAAG
Sequences:
>Translated_154_residues MSVQILVDGDACPVKDEIYMVALRHQVPVSVVSNSYFRIPEHPLISRKIVSDGFDAADDWIAEQASAASIVVTADIPLAD RCLKAGARVLGPSGKPFTDDSIGTALATRSIMADRRVGVAGIGAGGPAPFSKADRSRFLSALDAAIVAAKRAAG >Mature_153_residues SVQILVDGDACPVKDEIYMVALRHQVPVSVVSNSYFRIPEHPLISRKIVSDGFDAADDWIAEQASAASIVVTADIPLADR CLKAGARVLGPSGKPFTDDSIGTALATRSIMADRRVGVAGIGAGGPAPFSKADRSRFLSALDAAIVAAKRAAG
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=154, Percent_Identity=37.6623376623377, Blast_Score=100, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 16018; Mature: 15887
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQILVDGDACPVKDEIYMVALRHQVPVSVVSNSYFRIPEHPLISRKIVSDGFDAADDW CEEEEEECCCCCCCCCCEEEEEECCCCCEEECCCCEEECCCCCCHHHHHHHCCCCCHHHH IAEQASAASIVVTADIPLADRCLKAGARVLGPSGKPFTDDSIGTALATRSIMADRRVGVA HHHCCCCCEEEEEECCCHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEE GIGAGGPAPFSKADRSRFLSALDAAIVAAKRAAG EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVQILVDGDACPVKDEIYMVALRHQVPVSVVSNSYFRIPEHPLISRKIVSDGFDAADDW EEEEEECCCCCCCCCCEEEEEECCCCCEEECCCCEEECCCCCCHHHHHHHCCCCCHHHH IAEQASAASIVVTADIPLADRCLKAGARVLGPSGKPFTDDSIGTALATRSIMADRRVGVA HHHCCCCCEEEEEECCCHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEE GIGAGGPAPFSKADRSRFLSALDAAIVAAKRAAG EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA