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The map label for this gene is dapB [H]

Identifier: 114798226

GI number: 114798226

Start: 434450

End: 435280

Strand: Direct

Name: dapB [H]

Synonym: HNE_0437

Alternate gene names: 114798226

Gene position: 434450-435280 (Clockwise)

Preceding gene: 114797481

Following gene: 114798812

Centisome position: 11.73

GC content: 65.58

Gene sequence:

>831_bases
ATGAATAAACCGGAAAACCCCCTCAGTGTCGCCATCGCTGGTATCGCCGGGCGTATGGGGCGCCAGCTTGCGGCTGTTTC
CATTGATCGCGGCGTCCGGATTACCGGCGCCACGGAAGTCGCGGCCGCCAACGCTTATGGCGAAGACATCGGCCTCCTTG
CCGGCCGCCGGGCCATTGGCCTGCATCCTGTTGCTGACGCGGCCGGAGCTGCAGCGGGCGCAGGTGTGTGGATCGATTTC
ACACGGCCCGAAGCAACACTCGCCGCGTTAAAAGCGCTTGCCAGCACATCTGTGCGCGCAGCGATTATCGGCACCACAGG
CTTTACCGCCGCTGAGGAAGATGCCATCGCGGCGGCGTCCTCCCGTTTTGCGATTGTGAAGGCGGGCAATTTCTCCATCG
GGGTGAACCTGCTGGAGGCACTGACGCGTCTGGCGGCCAGCCGTCTGGGTACGGAGTGGGACATCGAAGTCCTCGAAACC
CACCACCGCATGAAGGCGGATGCCCCTTCGGGCACGGCCCTGATGCTTGGTGCGGCGGCGGCAGAGGGCAGGGGCGCGCC
GCTCAGCGACCTGCGGGCCGCGCCCTATGATGGCCCCGACGCGCAGCGCGAAACCGGCCAGATCGGCTTTTCCGTGCGCC
GTGCCGGGGGGGTGATCGGCGAGCATGAGGTGACATTCGGCTCGGAAAAGGAGCTCATCCGGCTTTCCCATACGGCACTT
GATCGCTCGGTCTTTGCCGAAGGCGCGCTGCATGCCGCTGCCTGGGCCGTGTCCCAGCCGCCGGGCCTTTACGATATGAA
CGATGTGTTGGGTCTCGGCCACACCGGCTGA

Upstream 100 bases:

>100_bases
TTCGCCAGCGCCTTCTCCGACGAGCTGCGGGAGCGCGAGCTTTCCAGCCTGCGGAGCGAACTGGAACAGACGAAGGCGGA
TACCGCTGAGGAGACGTTGG

Downstream 100 bases:

>100_bases
GGAAAGCGCCGTCATATCAGCCGAATGCGCCTTGACGCGGCGCAGCATCGTGACAACGTGACGGTTGTTTAACGTTCAGG
GTTGCATCCCAGTAGCGGAA

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNKPENPLSVAIAGIAGRMGRQLAAVSIDRGVRITGATEVAAANAYGEDIGLLAGRRAIGLHPVADAAGAAAGAGVWIDF
TRPEATLAALKALASTSVRAAIIGTTGFTAAEEDAIAAASSRFAIVKAGNFSIGVNLLEALTRLAASRLGTEWDIEVLET
HHRMKADAPSGTALMLGAAAAEGRGAPLSDLRAAPYDGPDAQRETGQIGFSVRRAGGVIGEHEVTFGSEKELIRLSHTAL
DRSVFAEGALHAAAWAVSQPPGLYDMNDVLGLGHTG

Sequences:

>Translated_276_residues
MNKPENPLSVAIAGIAGRMGRQLAAVSIDRGVRITGATEVAAANAYGEDIGLLAGRRAIGLHPVADAAGAAAGAGVWIDF
TRPEATLAALKALASTSVRAAIIGTTGFTAAEEDAIAAASSRFAIVKAGNFSIGVNLLEALTRLAASRLGTEWDIEVLET
HHRMKADAPSGTALMLGAAAAEGRGAPLSDLRAAPYDGPDAQRETGQIGFSVRRAGGVIGEHEVTFGSEKELIRLSHTAL
DRSVFAEGALHAAAWAVSQPPGLYDMNDVLGLGHTG
>Mature_276_residues
MNKPENPLSVAIAGIAGRMGRQLAAVSIDRGVRITGATEVAAANAYGEDIGLLAGRRAIGLHPVADAAGAAAGAGVWIDF
TRPEATLAALKALASTSVRAAIIGTTGFTAAEEDAIAAASSRFAIVKAGNFSIGVNLLEALTRLAASRLGTEWDIEVLET
HHRMKADAPSGTALMLGAAAAEGRGAPLSDLRAAPYDGPDAQRETGQIGFSVRRAGGVIGEHEVTFGSEKELIRLSHTAL
DRSVFAEGALHAAAWAVSQPPGLYDMNDVLGLGHTG

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=269, Percent_Identity=42.0074349442379, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 28193; Mature: 28193

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPENPLSVAIAGIAGRMGRQLAAVSIDRGVRITGATEVAAANAYGEDIGLLAGRRAIG
CCCCCCCHHEEEHHHHHHHCCEEEEEEECCCEEEECCHHHHCCCCCCCCHHHHCCCCCCC
LHPVADAAGAAAGAGVWIDFTRPEATLAALKALASTSVRAAIIGTTGFTAAEEDAIAAAS
CCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCC
SRFAIVKAGNFSIGVNLLEALTRLAASRLGTEWDIEVLETHHRMKADAPSGTALMLGAAA
CCEEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEC
AEGRGAPLSDLRAAPYDGPDAQRETGQIGFSVRRAGGVIGEHEVTFGSEKELIRLSHTAL
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEHHCCCCCCCCEECCCCCHHHHHHHHHHH
DRSVFAEGALHAAAWAVSQPPGLYDMNDVLGLGHTG
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MNKPENPLSVAIAGIAGRMGRQLAAVSIDRGVRITGATEVAAANAYGEDIGLLAGRRAIG
CCCCCCCHHEEEHHHHHHHCCEEEEEEECCCEEEECCHHHHCCCCCCCCHHHHCCCCCCC
LHPVADAAGAAAGAGVWIDFTRPEATLAALKALASTSVRAAIIGTTGFTAAEEDAIAAAS
CCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCC
SRFAIVKAGNFSIGVNLLEALTRLAASRLGTEWDIEVLETHHRMKADAPSGTALMLGAAA
CCEEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEC
AEGRGAPLSDLRAAPYDGPDAQRETGQIGFSVRRAGGVIGEHEVTFGSEKELIRLSHTAL
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEHHCCCCCCCCEECCCCCHHHHHHHHHHH
DRSVFAEGALHAAAWAVSQPPGLYDMNDVLGLGHTG
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA