Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is yadI [C]

Identifier: 114798812

GI number: 114798812

Start: 435380

End: 435784

Strand: Direct

Name: yadI [C]

Synonym: HNE_0438

Alternate gene names: 114798812

Gene position: 435380-435784 (Clockwise)

Preceding gene: 114798226

Following gene: 114800448

Centisome position: 11.75

GC content: 61.48

Gene sequence:

>405_bases
ATGATCGGCATTGTAGTTGTCAGCCATGGAAGATTAGCCCACGAGCTCGTCGCAGCAGCGGAGCACGTTGTGGGCCGCCT
TTGGCGTGCGCGCGCCGTCTCTATCGATTCTGACGATGACCTCGACCTCAAGCGTGAGCACATTCTGGCCGCTGTGAAAG
CCTGCGATGCAGGTCGCGGCGTTATCGTACTGACCGACATGTTCGGCGGCACGCCTTCAAACCTCGTCCTGTCCATCCGC
GGCAGTGTGCCGATGGAAATCGTCTCCGGCGCAAATCTGCCGATGCTGATCAAGCTGGCCGAAGTCCGTGAAGTGCTGAG
CCTGGAAGAGGCGGCGATCGCTGCCGCAGAGGGCGGGCGCAAATATGTGACCATCGCGTCCGAACTGCTGGCCCGGCTGC
CCTGA

Upstream 100 bases:

>100_bases
AGGAAAGCGCCGTCATATCAGCCGAATGCGCCTTGACGCGGCGCAGCATCGTGACAACGTGACGGTTGTTTAACGTTCAG
GGTTGCATCCCAGTAGCGGA

Downstream 100 bases:

>100_bases
TGTCGACGTCCGTTCCGGCAGCCTCTGCCCGTGTCACGATTGTCAATCGTAAGGGCCTGCATGCGCGGGCGTCGGCGAAG
GTCGCCAAGCTTGCGGCCGA

Product: PTS system mannose/fructose/sorbose family transporter subunit IID

Products: protein histidine; sugar phosphate

Alternate protein names: PTS System IIA Component; PTS System Fructose IIA Component; PTS System IIA Component Man Family; Fructose-Specific IIA Component; PTS System Transporter Subunit IIA; Pts System Mannose-Specific Eiiab Component; PTS Mannose-Specific IIA Component; PTS System Mannose Subfamily IIA Subunit; Pts System Fructose Subfamily IIa Component; Pts System Mannose/Fructose/Sorbose Family IIa Component; PTS System Fructose Subfamily Transprotein Subunit IIA; Pts System Fructose IIA Component; PTS System Mannose/Fructose-Specific Component IIA; PTS System Component IIA; Phosphotransferase System IIA Component; Phosphotransferase System Fructose Subfamily IIA Component; Phosphotransferase System Fructose-Specific IIA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIGIVVVSHGRLAHELVAAAEHVVGRLWRARAVSIDSDDDLDLKREHILAAVKACDAGRGVIVLTDMFGGTPSNLVLSIR
GSVPMEIVSGANLPMLIKLAEVREVLSLEEAAIAAAEGGRKYVTIASELLARLP

Sequences:

>Translated_134_residues
MIGIVVVSHGRLAHELVAAAEHVVGRLWRARAVSIDSDDDLDLKREHILAAVKACDAGRGVIVLTDMFGGTPSNLVLSIR
GSVPMEIVSGANLPMLIKLAEVREVLSLEEAAIAAAEGGRKYVTIASELLARLP
>Mature_134_residues
MIGIVVVSHGRLAHELVAAAEHVVGRLWRARAVSIDSDDDLDLKREHILAAVKACDAGRGVIVLTDMFGGTPSNLVLSIR
GSVPMEIVSGANLPMLIKLAEVREVLSLEEAAIAAAEGGRKYVTIASELLARLP

Specific function: Unknown

COG id: COG2893

COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.69

Molecular weight: Translated: 14186; Mature: 14186

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS51096 PTS_EIIA_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGIVVVSHGRLAHELVAAAEHVVGRLWRARAVSIDSDDDLDLKREHILAAVKACDAGRG
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCCC
VIVLTDMFGGTPSNLVLSIRGSVPMEIVSGANLPMLIKLAEVREVLSLEEAAIAAAEGGR
EEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCC
KYVTIASELLARLP
EEEHHHHHHHHHCC
>Mature Secondary Structure
MIGIVVVSHGRLAHELVAAAEHVVGRLWRARAVSIDSDDDLDLKREHILAAVKACDAGRG
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCCC
VIVLTDMFGGTPSNLVLSIRGSVPMEIVSGANLPMLIKLAEVREVLSLEEAAIAAAEGGR
EEEEEECCCCCCCCEEEEECCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCC
KYVTIASELLARLP
EEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: protein N(pi)-phosphohistidine; sugar

Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA