| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114797898
Identifier: 114797898
GI number: 114797898
Start: 812047
End: 814221
Strand: Reverse
Name: 114797898
Synonym: HNE_0798
Alternate gene names: NA
Gene position: 814221-812047 (Counterclockwise)
Preceding gene: 114799784
Following gene: 114798886
Centisome position: 21.98
GC content: 50.48
Gene sequence:
>2175_bases TTGCGCTCTAGGCTTTCCACAGATCACTTCATGATGATCTGCGGGTTTGGAATCATAGTTTGCATTTTCGGTGCCCTTCC GGGTGTGATGGCCCCAACTATGGGGCAAGCCATCTGGTTGACAGGCTTCTCGTCAGCTTTCGCAAACGACTTTCCGATAT CACTTTACGCAACGGATTTCGGATACCCGCTTTCCTCACCCATACCATTTGGCCTTTCAGGCGCACTGCCCTGTGCCATC CTCATCAAGATGGGCGTTCCTCAAATTGATGCCTATTCGCTGGTTTTTGCCGCCTGGCTTTTAGTTGCGTATTATTTTGC CATTCAGCTCGCAAAGTACTTAGGCGTAAATCCCAAGCTGGCTGTCCTGCTCGCGCTAACTTGGTGCACAATGCCCATAT TGTGGACCCATGTGCCATATTCCATGCTGTCTATCGGCATGGTGTTGATGCCGACATATGCATATGCGGCAATTAAATTC ATACAGAGCAATGAATTCAAACTGAGCGATTACGCTTTCCTGTTCTTTATCTGTATTATTGCCGTTTTCACTGACGGATA TACTTTTGTGATGTTCGCCATTCTGTACGGAGGCGTCAGTTTTGGCGAGATAGTACTAAATCGCGAGAACCGGAGGAAAT CCCTTCTGGTTTTCACTCCTCTGGCAATGGTAGCGTTTGCCATGTCGTACGTTCTCTATACTCAGTATATCGGCCAAGGC AGCTATCCTCCTCCGAAAATGGAATTTTTTCGTGCCTGGGGGGCCGATCTCACATACTTTCTTCAGCCCACGGCCAATGT GACTTGGCTCTGGGATATTCTAAATCTTTCTGCAGACCGGCCGGACAACCTACACTACGGAGATGCTTCTGCGCATCGCG GCACATTTCTGTTGCCGCTCATTCTGATATCTTCCTTTGCAGTCGCACGCCTCCATCGATCATCGTTGAAATGCGGCTTG CTAATCGTCGCGGCCTTCAGCCTGTACATGTCTCTCGGGCCCACATTTAAAATCGGCGCGACGAGAGCGGAAGATGAGTC GAGGCTAATGCATGCAGAAGCGGCAGGCACACCCACCGGGACACAAGTCCTTTCAGAACGGGTACCAGGCTTCAAGAACA TGCGCGCCAGCTATCGCTGGGTTGTTCTGACCCAGCTTAGTCTCTGGATTATTGTCACTCTTTGGCTGGGGAATGAACAG CGCACGGCGACCAATCGAAGCAAAGTCAGCATGCAGTACTATTTCATACCGCTCTTGCTGATCCTTGTTCAACTCCCAAA CCCCATAAAAGCTATGCATGACTACTCGCAAGCCCGTCATCAATTTAATACCTTTGCCGAGGATACGAGCTTTTTCCGAA AGGAACTTGAAGGGCAACTCGTCGCTTTCCTTCCCTATGGAAATGATTTCGGGGTCAATTTTCTCGCCTCAACGAACGGT TTTCAATCCTTCAATATTGGAGGAGACAAAAATTGGGAAGAAGCCAAAAAAGTTTGGCCCCAGAGCCTGCATGTTGCCAG CCGAACCATATTCTCCAGCTCTGCCCCGGATAACCTGACCGCTCTCTTTTCAAGCACTAACATAGATGCCGTTGTGGTTC TCCAACATGACCTTCTCTGGAGCGTGCATTCCTGGCCGCCGGCACTTTCTCGCATCAAGGAAATCAATACGCTCCGAACA CTCCTTATGGCGGACGATGCCTTCCTAGTATCAGAGATTCCGAGGGGCATTGTTATCCGGCGTATCTCCAAGACAGAGGC AGCGCAGATGACAGCATGCCCGCAGGAAGTCTGTGCGCGCTTGAACATCCGCCCCGACATGGGCTTCGGCACCATGGTTG GCCAATTTGATATGGACGGCGTGACTACTACCACTGGTGTGTCCGGATACCTTTTATTCGGCCCCTATATCAATATAGAG GCCGGCCAATATACTGCGGAAATATCCTTCGCCGCGGACCAGGCAGCAACGGTGCATGTTGACGTCGTATCCGACCTCGG AAAATCCGTTCATGCAGAGAAGCGTATCGTGATATCCGCTTCAGAGTCCGGCAATCTGATTGGATCGATTGACTTTACCC TGCTGGATTCCGTCAAAGATCTAGAAGTGCGCATCAGGGTGGATGAAAATACCACAATCCGCGCGACCAGCCTTACCATT CGTCCAGGCAAATAG
Upstream 100 bases:
>100_bases TCACTTTTTCAATTGATGAAGCACTTGAAGCGCCCCGCTTTCCCGACAGGCAGCGCCAACAAGGAAAATCCCATTGACCG ATAGTGCGTTCTTCTCCTCA
Downstream 100 bases:
>100_bases ACTTGGCCAAAATCCAAATGTCAGTGAGGCACTTCTCCAGGGAACAGCCTCATCTGTGAAATACACGCGATAATACCACA GTCAGACCTACCCGCGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 724; Mature: 724
Protein sequence:
>724_residues MRSRLSTDHFMMICGFGIIVCIFGALPGVMAPTMGQAIWLTGFSSAFANDFPISLYATDFGYPLSSPIPFGLSGALPCAI LIKMGVPQIDAYSLVFAAWLLVAYYFAIQLAKYLGVNPKLAVLLALTWCTMPILWTHVPYSMLSIGMVLMPTYAYAAIKF IQSNEFKLSDYAFLFFICIIAVFTDGYTFVMFAILYGGVSFGEIVLNRENRRKSLLVFTPLAMVAFAMSYVLYTQYIGQG SYPPPKMEFFRAWGADLTYFLQPTANVTWLWDILNLSADRPDNLHYGDASAHRGTFLLPLILISSFAVARLHRSSLKCGL LIVAAFSLYMSLGPTFKIGATRAEDESRLMHAEAAGTPTGTQVLSERVPGFKNMRASYRWVVLTQLSLWIIVTLWLGNEQ RTATNRSKVSMQYYFIPLLLILVQLPNPIKAMHDYSQARHQFNTFAEDTSFFRKELEGQLVAFLPYGNDFGVNFLASTNG FQSFNIGGDKNWEEAKKVWPQSLHVASRTIFSSSAPDNLTALFSSTNIDAVVVLQHDLLWSVHSWPPALSRIKEINTLRT LLMADDAFLVSEIPRGIVIRRISKTEAAQMTACPQEVCARLNIRPDMGFGTMVGQFDMDGVTTTTGVSGYLLFGPYINIE AGQYTAEISFAADQAATVHVDVVSDLGKSVHAEKRIVISASESGNLIGSIDFTLLDSVKDLEVRIRVDENTTIRATSLTI RPGK
Sequences:
>Translated_724_residues MRSRLSTDHFMMICGFGIIVCIFGALPGVMAPTMGQAIWLTGFSSAFANDFPISLYATDFGYPLSSPIPFGLSGALPCAI LIKMGVPQIDAYSLVFAAWLLVAYYFAIQLAKYLGVNPKLAVLLALTWCTMPILWTHVPYSMLSIGMVLMPTYAYAAIKF IQSNEFKLSDYAFLFFICIIAVFTDGYTFVMFAILYGGVSFGEIVLNRENRRKSLLVFTPLAMVAFAMSYVLYTQYIGQG SYPPPKMEFFRAWGADLTYFLQPTANVTWLWDILNLSADRPDNLHYGDASAHRGTFLLPLILISSFAVARLHRSSLKCGL LIVAAFSLYMSLGPTFKIGATRAEDESRLMHAEAAGTPTGTQVLSERVPGFKNMRASYRWVVLTQLSLWIIVTLWLGNEQ RTATNRSKVSMQYYFIPLLLILVQLPNPIKAMHDYSQARHQFNTFAEDTSFFRKELEGQLVAFLPYGNDFGVNFLASTNG FQSFNIGGDKNWEEAKKVWPQSLHVASRTIFSSSAPDNLTALFSSTNIDAVVVLQHDLLWSVHSWPPALSRIKEINTLRT LLMADDAFLVSEIPRGIVIRRISKTEAAQMTACPQEVCARLNIRPDMGFGTMVGQFDMDGVTTTTGVSGYLLFGPYINIE AGQYTAEISFAADQAATVHVDVVSDLGKSVHAEKRIVISASESGNLIGSIDFTLLDSVKDLEVRIRVDENTTIRATSLTI RPGK >Mature_724_residues MRSRLSTDHFMMICGFGIIVCIFGALPGVMAPTMGQAIWLTGFSSAFANDFPISLYATDFGYPLSSPIPFGLSGALPCAI LIKMGVPQIDAYSLVFAAWLLVAYYFAIQLAKYLGVNPKLAVLLALTWCTMPILWTHVPYSMLSIGMVLMPTYAYAAIKF IQSNEFKLSDYAFLFFICIIAVFTDGYTFVMFAILYGGVSFGEIVLNRENRRKSLLVFTPLAMVAFAMSYVLYTQYIGQG SYPPPKMEFFRAWGADLTYFLQPTANVTWLWDILNLSADRPDNLHYGDASAHRGTFLLPLILISSFAVARLHRSSLKCGL LIVAAFSLYMSLGPTFKIGATRAEDESRLMHAEAAGTPTGTQVLSERVPGFKNMRASYRWVVLTQLSLWIIVTLWLGNEQ RTATNRSKVSMQYYFIPLLLILVQLPNPIKAMHDYSQARHQFNTFAEDTSFFRKELEGQLVAFLPYGNDFGVNFLASTNG FQSFNIGGDKNWEEAKKVWPQSLHVASRTIFSSSAPDNLTALFSSTNIDAVVVLQHDLLWSVHSWPPALSRIKEINTLRT LLMADDAFLVSEIPRGIVIRRISKTEAAQMTACPQEVCARLNIRPDMGFGTMVGQFDMDGVTTTTGVSGYLLFGPYINIE AGQYTAEISFAADQAATVHVDVVSDLGKSVHAEKRIVISASESGNLIGSIDFTLLDSVKDLEVRIRVDENTTIRATSLTI RPGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80300; Mature: 80300
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRLSTDHFMMICGFGIIVCIFGALPGVMAPTMGQAIWLTGFSSAFANDFPISLYATDF CCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEECCHHHHCCCCCEEEEEECC GYPLSSPIPFGLSGALPCAILIKMGVPQIDAYSLVFAAWLLVAYYFAIQLAKYLGVNPKL CCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AVLLALTWCTMPILWTHVPYSMLSIGMVLMPTYAYAAIKFIQSNEFKLSDYAFLFFICII HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH AVFTDGYTFVMFAILYGGVSFGEIVLNRENRRKSLLVFTPLAMVAFAMSYVLYTQYIGQG HHHCCCHHHHHHHHHHCCCCHHHEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCC SYPPPKMEFFRAWGADLTYFLQPTANVTWLWDILNLSADRPDNLHYGDASAHRGTFLLPL CCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCHHHHHH ILISSFAVARLHRSSLKCGLLIVAAFSLYMSLGPTFKIGATRAEDESRLMHAEAAGTPTG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHEEEHHCCCCCCH TQVLSERVPGFKNMRASYRWVVLTQLSLWIIVTLWLGNEQRTATNRSKVSMQYYFIPLLL HHHHHHHCCCCHHCCCCEEEEEEHHHHEEHEEEEEECCCCCCCCCCHHEEEHHHHHHHHH ILVQLPNPIKAMHDYSQARHQFNTFAEDTSFFRKELEGQLVAFLPYGNDFGVNFLASTNG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCC FQSFNIGGDKNWEEAKKVWPQSLHVASRTIFSSSAPDNLTALFSSTNIDAVVVLQHDLLW CEEECCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEHHHHH SVHSWPPALSRIKEINTLRTLLMADDAFLVSEIPRGIVIRRISKTEAAQMTACPQEVCAR HHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEHHHHHHHHHHCCHHHHHHH LNIRPDMGFGTMVGQFDMDGVTTTTGVSGYLLFGPYINIEAGQYTAEISFAADQAATVHV CCCCCCCCCCCEECCCCCCCCEEECCCCEEEEECCEEEEECCCEEEEEEEECCCCEEEEE DVVSDLGKSVHAEKRIVISASESGNLIGSIDFTLLDSVKDLEVRIRVDENTTIRATSLTI EEHHHCCHHHCCCCEEEEEECCCCCEEEEEHHHHHCCCCCEEEEEEECCCCEEEEEEEEE RPGK ECCC >Mature Secondary Structure MRSRLSTDHFMMICGFGIIVCIFGALPGVMAPTMGQAIWLTGFSSAFANDFPISLYATDF CCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEECCHHHHCCCCCEEEEEECC GYPLSSPIPFGLSGALPCAILIKMGVPQIDAYSLVFAAWLLVAYYFAIQLAKYLGVNPKL CCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AVLLALTWCTMPILWTHVPYSMLSIGMVLMPTYAYAAIKFIQSNEFKLSDYAFLFFICII HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH AVFTDGYTFVMFAILYGGVSFGEIVLNRENRRKSLLVFTPLAMVAFAMSYVLYTQYIGQG HHHCCCHHHHHHHHHHCCCCHHHEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCC SYPPPKMEFFRAWGADLTYFLQPTANVTWLWDILNLSADRPDNLHYGDASAHRGTFLLPL CCCCCHHHHHHHCCCCEEEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCCCCCCHHHHHH ILISSFAVARLHRSSLKCGLLIVAAFSLYMSLGPTFKIGATRAEDESRLMHAEAAGTPTG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHEEEHHCCCCCCH TQVLSERVPGFKNMRASYRWVVLTQLSLWIIVTLWLGNEQRTATNRSKVSMQYYFIPLLL HHHHHHHCCCCHHCCCCEEEEEEHHHHEEHEEEEEECCCCCCCCCCHHEEEHHHHHHHHH ILVQLPNPIKAMHDYSQARHQFNTFAEDTSFFRKELEGQLVAFLPYGNDFGVNFLASTNG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCC FQSFNIGGDKNWEEAKKVWPQSLHVASRTIFSSSAPDNLTALFSSTNIDAVVVLQHDLLW CEEECCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEHHHHH SVHSWPPALSRIKEINTLRTLLMADDAFLVSEIPRGIVIRRISKTEAAQMTACPQEVCAR HHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEHHHHHHHHHHCCHHHHHHH LNIRPDMGFGTMVGQFDMDGVTTTTGVSGYLLFGPYINIEAGQYTAEISFAADQAATVHV CCCCCCCCCCCEECCCCCCCCEEECCCCEEEEECCEEEEECCCEEEEEEEECCCCEEEEE DVVSDLGKSVHAEKRIVISASESGNLIGSIDFTLLDSVKDLEVRIRVDENTTIRATSLTI EEHHHCCHHHCCCCEEEEEECCCCCEEEEEHHHHHCCCCCEEEEEEECCCCEEEEEEEEE RPGK ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA