| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114799784
Identifier: 114799784
GI number: 114799784
Start: 814238
End: 815158
Strand: Reverse
Name: 114799784
Synonym: HNE_0799
Alternate gene names: NA
Gene position: 815158-814238 (Counterclockwise)
Preceding gene: 114798982
Following gene: 114797898
Centisome position: 22.0
GC content: 49.4
Gene sequence:
>921_bases GTGCGCCGCAAATTAAAAGCCGCAGTTAGCGTGGTCGGTTTTATCCTTGGTCTGGCCGGTCTCGTTTTTCTCGCGATGCA GTTAGCTCAATATGTGCGGGCACCCGAGGTTCTCAACTTAAGTCTTACAGTTTACCTAGTCGCAGCGGGGTGCGCGGCGT TGTATGTAATGGGCAACTTAGCGCTCACGATAGCATATCATAAGTTCTTGCGTCAGAGTGCACGGGCGTTTTCTTATACC GCTATATTGTATGGCATCAGCCAGATCGCGAAATATGTTCCCGGAAATATCCTGCATCTGGCGGGCAGACAGGCTGTCGG CGCTCAATTGCATTTTGAACAGTCAAGTTTGGCAAAAGCGACCTTCATTGAAATCATATCACTCGCGCTCTCCGCAACAC TGTTCGGATCAGTTTTGATCCTCATTACATTCTTGAAGACACCTCCAACGCTGGCATTTGCCTTCTGGGTAATATTACAG CTGTTTGCGCTTCTAATCCTCGCCCGCATTTTCGGAAAAAAGATTGCGACGGGCTTTGCTCTCCATACTGCCTATTTTTT GCTGAGCGGGTTTGGGTTCGCAATTCTTTTCGCTGCGATCTCCTATTCCACCAGACTAAGCGTGGATCATATTCTGCTCT TGGCCGCAGCCTTTGTCGTAGCATGGGTAGCAGGCTTTCTTACTCCGGGCTCACCAGCCGGTCTCGGAGTGAGGGAGGCA GCGCTCATATTCATGCTTGGCCCTCAGTTTGAAGGTAGTGAAATAGTTCTAGCTGTACTTATGTCCCGAATATCCAACAT ATTTGGCGACGTGATATTCTTCTTCGCCGCTTTTGGATCACTTTTTCAATTGATGAAGCACTTGAAGCGCCCCGCTTTCC CGACAGGCAGCGCCAACAAGGAAAATCCCATTGACCGATAG
Upstream 100 bases:
>100_bases AACCGGCATTAAAAACTTCGTTTCTGAGCGGTTCCACATTCTCGAGGTTCGGAAGCCACTTCCCTGGACGGCTTTGCTAT GTAAGCCTAGGTAACACAGA
Downstream 100 bases:
>100_bases TGCGTTCTTCTCCTCATTGCGCTCTAGGCTTTCCACAGATCACTTCATGATGATCTGCGGGTTTGGAATCATAGTTTGCA TTTTCGGTGCCCTTCCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MRRKLKAAVSVVGFILGLAGLVFLAMQLAQYVRAPEVLNLSLTVYLVAAGCAALYVMGNLALTIAYHKFLRQSARAFSYT AILYGISQIAKYVPGNILHLAGRQAVGAQLHFEQSSLAKATFIEIISLALSATLFGSVLILITFLKTPPTLAFAFWVILQ LFALLILARIFGKKIATGFALHTAYFLLSGFGFAILFAAISYSTRLSVDHILLLAAAFVVAWVAGFLTPGSPAGLGVREA ALIFMLGPQFEGSEIVLAVLMSRISNIFGDVIFFFAAFGSLFQLMKHLKRPAFPTGSANKENPIDR
Sequences:
>Translated_306_residues MRRKLKAAVSVVGFILGLAGLVFLAMQLAQYVRAPEVLNLSLTVYLVAAGCAALYVMGNLALTIAYHKFLRQSARAFSYT AILYGISQIAKYVPGNILHLAGRQAVGAQLHFEQSSLAKATFIEIISLALSATLFGSVLILITFLKTPPTLAFAFWVILQ LFALLILARIFGKKIATGFALHTAYFLLSGFGFAILFAAISYSTRLSVDHILLLAAAFVVAWVAGFLTPGSPAGLGVREA ALIFMLGPQFEGSEIVLAVLMSRISNIFGDVIFFFAAFGSLFQLMKHLKRPAFPTGSANKENPIDR >Mature_306_residues MRRKLKAAVSVVGFILGLAGLVFLAMQLAQYVRAPEVLNLSLTVYLVAAGCAALYVMGNLALTIAYHKFLRQSARAFSYT AILYGISQIAKYVPGNILHLAGRQAVGAQLHFEQSSLAKATFIEIISLALSATLFGSVLILITFLKTPPTLAFAFWVILQ LFALLILARIFGKKIATGFALHTAYFLLSGFGFAILFAAISYSTRLSVDHILLLAAAFVVAWVAGFLTPGSPAGLGVREA ALIFMLGPQFEGSEIVLAVLMSRISNIFGDVIFFFAAFGSLFQLMKHLKRPAFPTGSANKENPIDR
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33031; Mature: 33031
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRKLKAAVSVVGFILGLAGLVFLAMQLAQYVRAPEVLNLSLTVYLVAAGCAALYVMGNL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALTIAYHKFLRQSARAFSYTAILYGISQIAKYVPGNILHLAGRQAVGAQLHFEQSSLAKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHCCHHCCCHHHHHHH TFIEIISLALSATLFGSVLILITFLKTPPTLAFAFWVILQLFALLILARIFGKKIATGFA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHTAYFLLSGFGFAILFAAISYSTRLSVDHILLLAAAFVVAWVAGFLTPGSPAGLGVREA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH ALIFMLGPQFEGSEIVLAVLMSRISNIFGDVIFFFAAFGSLFQLMKHLKRPAFPTGSANK HHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ENPIDR CCCCCC >Mature Secondary Structure MRRKLKAAVSVVGFILGLAGLVFLAMQLAQYVRAPEVLNLSLTVYLVAAGCAALYVMGNL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALTIAYHKFLRQSARAFSYTAILYGISQIAKYVPGNILHLAGRQAVGAQLHFEQSSLAKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHCCHHCCCHHHHHHH TFIEIISLALSATLFGSVLILITFLKTPPTLAFAFWVILQLFALLILARIFGKKIATGFA HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHTAYFLLSGFGFAILFAAISYSTRLSVDHILLLAAAFVVAWVAGFLTPGSPAGLGVREA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH ALIFMLGPQFEGSEIVLAVLMSRISNIFGDVIFFFAAFGSLFQLMKHLKRPAFPTGSANK HHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC ENPIDR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA