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The map label for this gene is yicJ [C]

Identifier: 114797787

GI number: 114797787

Start: 2213774

End: 2215222

Strand: Direct

Name: yicJ [C]

Synonym: HNE_2129

Alternate gene names: 114797787

Gene position: 2213774-2215222 (Clockwise)

Preceding gene: 114800361

Following gene: 114797656

Centisome position: 59.75

GC content: 59.14

Gene sequence:

>1449_bases
ATGGAACACGCCGTGACCCGCAAGGCAGGAAAATTACCCTGGGCGACGAAGCTCATCTACGGGGTTGGAACCATCGCGTT
CGGTATCAAGGACCATGGTTTCAACGCCCTGCTGATGATCTACTACAATCAGGTAATGGGCCTGCCTGCGGCCTGGGTTG
GCACCGCGATCATGTTGGCCATGGTCGTGGATGCCATCCTGGACCCGGTGGTCGGGCAATGGTCTGACAGCCTGCGGAGC
AAATGGGGGCGGCGCCATCCGTTCATGTATGCTTCGGTCATTCCGGTCGGGATATTCTACCTGCTGCTCTGGTTCCCGCC
CGCTGACGCCTCGCACCTCATCCTGTTTGCCTATCTTCTGATCATGACGACCATAACGCGCACATTCATCGGCGTGTATG
AAATTCCGTCCACGGCGCTCCTGGCCGAGTTCACCCAGAACTATCACGAGCGCACAGAGCTAGTGTCCTACCGGTATTTC
TTCGGCGTGGCCGGGGGCATTCTGATGGGGATCTTCGTGTTCACCGCCATCTTTGCCGATGACGCAACGGCCGAAGGCGG
CCTGCTCGACAGTGCCGGCTATCACACCTATGCGTGGATTGCAGCGCCCCTGATGGCCACTGCCATCTTTGCCTCCACCA
TCGGCACGCATAACCGCATCTCCAGCCTTGTCATACTTCCGCCACCAGAGCGCAAACCGCTGATCCAGACGATGCGGGAA
ATGTTTGCCACCCTGTTTCATCGGGTCAACGCACCGATCTTCATCGGCAGCATTTTCGGCTCGATGGCGGGGGGCCTGAA
CGCGGCCCTGACCATCTATATGCAGGCTTACTTCTGGGAGCTGAGCAGCGATCAGATCGCCCTGCTCACCTCGGCCGGGC
TGCTCGGCGTCATTCTGGCGCTGGTGATCGCCCTGCCCCTGTCCAAGGCCTTCGGCAAGAAATGGACGACCCTCGTTCTG
TTTGCTGTGACGCTCGCGGGCATTGTCACGCCGGTGCTGCTGCGTCTTGGCGAAATGTTTCCGGTCAATGGCGACCCGGC
CCTTGTGCCCATCCTCTTCGCGTTTCAGGCGCTCGTTGCCATGTCGGTCGTTGCCGCCGCCATCCTGACAGCCTCGATGA
TTGCCGACGCCACCGATCAGATCCAGCTCTCCACGGGCCGCCAGTCGGAGGGTCTTCTGTTTTCTGCGTCCACCTTCATC
GGGAAAACTGTGTCAGGCATGGGCGTTCTGGTGTCGGGGCTGCTGCTCGCCTTTGTCGGCTTTCCAGATGACGCAAAACC
GGGCGCTGTTGCGCTCTCGACGATAAACGACCTGGCACTGGGCCTGACACTTGCAACATTCGTGTTCACGTCCACGGCGC
TCGTCATCATGAGCTTTTATCCTGTAACGAAGAAGGATCACGAATCAGCCGTTGAAACATTGGCCCGCAAAAGGGCCGAA
CAACTTTGA

Upstream 100 bases:

>100_bases
CAGACGGCCATTCCGGCTGGCGGCTTTGCCAATACGCTCTACCTGACCCCGCCGCGCACCTATGGCGTTCAGTTGCAGAT
GAGCTTCTGATCCACAGGGC

Downstream 100 bases:

>100_bases
CGGCACCGCGTTCCACCCTAGAATACCCGCAAGACCACACTGACCCCCGGCAAGAGAGTTGTAATGGCCAAAACCCCTAA
AACGGAAAAGCCGGAACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MEHAVTRKAGKLPWATKLIYGVGTIAFGIKDHGFNALLMIYYNQVMGLPAAWVGTAIMLAMVVDAILDPVVGQWSDSLRS
KWGRRHPFMYASVIPVGIFYLLLWFPPADASHLILFAYLLIMTTITRTFIGVYEIPSTALLAEFTQNYHERTELVSYRYF
FGVAGGILMGIFVFTAIFADDATAEGGLLDSAGYHTYAWIAAPLMATAIFASTIGTHNRISSLVILPPPERKPLIQTMRE
MFATLFHRVNAPIFIGSIFGSMAGGLNAALTIYMQAYFWELSSDQIALLTSAGLLGVILALVIALPLSKAFGKKWTTLVL
FAVTLAGIVTPVLLRLGEMFPVNGDPALVPILFAFQALVAMSVVAAAILTASMIADATDQIQLSTGRQSEGLLFSASTFI
GKTVSGMGVLVSGLLLAFVGFPDDAKPGAVALSTINDLALGLTLATFVFTSTALVIMSFYPVTKKDHESAVETLARKRAE
QL

Sequences:

>Translated_482_residues
MEHAVTRKAGKLPWATKLIYGVGTIAFGIKDHGFNALLMIYYNQVMGLPAAWVGTAIMLAMVVDAILDPVVGQWSDSLRS
KWGRRHPFMYASVIPVGIFYLLLWFPPADASHLILFAYLLIMTTITRTFIGVYEIPSTALLAEFTQNYHERTELVSYRYF
FGVAGGILMGIFVFTAIFADDATAEGGLLDSAGYHTYAWIAAPLMATAIFASTIGTHNRISSLVILPPPERKPLIQTMRE
MFATLFHRVNAPIFIGSIFGSMAGGLNAALTIYMQAYFWELSSDQIALLTSAGLLGVILALVIALPLSKAFGKKWTTLVL
FAVTLAGIVTPVLLRLGEMFPVNGDPALVPILFAFQALVAMSVVAAAILTASMIADATDQIQLSTGRQSEGLLFSASTFI
GKTVSGMGVLVSGLLLAFVGFPDDAKPGAVALSTINDLALGLTLATFVFTSTALVIMSFYPVTKKDHESAVETLARKRAE
QL
>Mature_482_residues
MEHAVTRKAGKLPWATKLIYGVGTIAFGIKDHGFNALLMIYYNQVMGLPAAWVGTAIMLAMVVDAILDPVVGQWSDSLRS
KWGRRHPFMYASVIPVGIFYLLLWFPPADASHLILFAYLLIMTTITRTFIGVYEIPSTALLAEFTQNYHERTELVSYRYF
FGVAGGILMGIFVFTAIFADDATAEGGLLDSAGYHTYAWIAAPLMATAIFASTIGTHNRISSLVILPPPERKPLIQTMRE
MFATLFHRVNAPIFIGSIFGSMAGGLNAALTIYMQAYFWELSSDQIALLTSAGLLGVILALVIALPLSKAFGKKWTTLVL
FAVTLAGIVTPVLLRLGEMFPVNGDPALVPILFAFQALVAMSVVAAAILTASMIADATDQIQLSTGRQSEGLLFSASTFI
GKTVSGMGVLVSGLLLAFVGFPDDAKPGAVALSTINDLALGLTLATFVFTSTALVIMSFYPVTKKDHESAVETLARKRAE
QL

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Homo sapiens, GI122937339, Length=494, Percent_Identity=22.8744939271255, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI87082306, Length=485, Percent_Identity=24.7422680412371, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1786466, Length=484, Percent_Identity=24.7933884297521, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI145693206, Length=495, Percent_Identity=25.2525252525253, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790561, Length=464, Percent_Identity=23.2758620689655, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787902, Length=486, Percent_Identity=23.4567901234568, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51972; Mature: 51972

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHAVTRKAGKLPWATKLIYGVGTIAFGIKDHGFNALLMIYYNQVMGLPAAWVGTAIMLA
CCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
MVVDAILDPVVGQWSDSLRSKWGRRHPFMYASVIPVGIFYLLLWFPPADASHLILFAYLL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IMTTITRTFIGVYEIPSTALLAEFTQNYHERTELVSYRYFFGVAGGILMGIFVFTAIFAD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DATAEGGLLDSAGYHTYAWIAAPLMATAIFASTIGTHNRISSLVILPPPERKPLIQTMRE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCHHHHHHHH
MFATLFHRVNAPIFIGSIFGSMAGGLNAALTIYMQAYFWELSSDQIALLTSAGLLGVILA
HHHHHHHHCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEHHHCCHHHHHHH
LVIALPLSKAFGKKWTTLVLFAVTLAGIVTPVLLRLGEMFPVNGDPALVPILFAFQALVA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
MSVVAAAILTASMIADATDQIQLSTGRQSEGLLFSASTFIGKTVSGMGVLVSGLLLAFVG
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHC
FPDDAKPGAVALSTINDLALGLTLATFVFTSTALVIMSFYPVTKKDHESAVETLARKRAE
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QL
CC
>Mature Secondary Structure
MEHAVTRKAGKLPWATKLIYGVGTIAFGIKDHGFNALLMIYYNQVMGLPAAWVGTAIMLA
CCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH
MVVDAILDPVVGQWSDSLRSKWGRRHPFMYASVIPVGIFYLLLWFPPADASHLILFAYLL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IMTTITRTFIGVYEIPSTALLAEFTQNYHERTELVSYRYFFGVAGGILMGIFVFTAIFAD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DATAEGGLLDSAGYHTYAWIAAPLMATAIFASTIGTHNRISSLVILPPPERKPLIQTMRE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCCHHHHHHHH
MFATLFHRVNAPIFIGSIFGSMAGGLNAALTIYMQAYFWELSSDQIALLTSAGLLGVILA
HHHHHHHHCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEHHHCCHHHHHHH
LVIALPLSKAFGKKWTTLVLFAVTLAGIVTPVLLRLGEMFPVNGDPALVPILFAFQALVA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
MSVVAAAILTASMIADATDQIQLSTGRQSEGLLFSASTFIGKTVSGMGVLVSGLLLAFVG
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHC
FPDDAKPGAVALSTINDLALGLTLATFVFTSTALVIMSFYPVTKKDHESAVETLARKRAE
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]