The gene/protein map for NC_008358 is currently unavailable.
Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114797759

Identifier: 114797759

GI number: 114797759

Start: 951142

End: 952212

Strand: Reverse

Name: 114797759

Synonym: HNE_0936

Alternate gene names: NA

Gene position: 952212-951142 (Counterclockwise)

Preceding gene: 114797130

Following gene: 114799794

Centisome position: 25.7

GC content: 62.65

Gene sequence:

>1071_bases
TTGGCTGACTTTCTGATCCGGCGCAGCAATCTGCGCGACACTTCCTGGGTAAACACGCCGCTGCCGCCACTGGCAGATGG
ACAGGCGCGGCTGAAGGTGGACGCCTTCGCGCTGACGGCAAACAACGTCACCTATGCCAGCTTTGGCGAGGCGATGGGCT
ATTGGAACTTCTTCCCGGCGGCTGATCCGGCCTTCGGCCGCGTGCCTGTCTGGGGTTTTGCCACCGTTACCGCGTCCAAG
GCTGAAGGCGTTGCGCCCGGTGCGCGCGTCTATGGATACCTGCCGATCTCGGATGAGTTCGACATCCAGCCCGTGCGTGT
CAGCGCGGCGAGCTTTATGGACGGCGCCGCCCATCGCCAGGGGCTCGCACCCATTTACAACACCTACATCTTCAACGCGG
CAGACCCGTCTTACGATCCGGCTTTCGAAGCCCAGCAGATGCTGTTCCGCCCCCTGTTCACCACCGGCTGGATGATTGAT
GACTGCCTGATGGAGACGGGCACGGAGATCCCGGAAACGGTTGTGATTTCGTCGGCCTCGTCCAAGACCGCGCTCGCCCT
CGCCCATTGCCTGAAACAGCGCGGCGCCGTGGAAGCCATCGGCCTCACCTCACCGGCCAACAAGGACTATGTCGAAGCCT
CCGGCCTCTATGCGCGCACCACAACCTATGACGATGTGGACCGGCTGCACGCGCGGGGGCTTTCGGCCTATGTCGACTTT
GTGGGGCGCCCGGCACTCACCGCCGATGTCCATCATGCGCTGAAGGACCGGCTGGTCCGCAGCCTTGTGATCGGTGTGAC
GGATTGGGAAGGTAATCGCGCGCCGGTTGACGCGCCGGGTCCACAGCCGGAATTCTTCTTTGTGCCGACATATGCCGCCG
AGCGCGCAAAAGCGCTGGGCGCGGATGAACTGAACGCCAGAACCAGCAAGGCGCTGGCAGGCTTCTATTCGGCCTCAGCC
AAATATCTCACGCCCCTCAAACAGAGCGGTCAGGACGCCATCAAGACCGCCTGGCAACAAACGCTCGACGCGAAGATCCC
GCCCTCAAAAGGGCTGATCCTCAGCTTCTGA

Upstream 100 bases:

>100_bases
GGAAATACTTAACAATGAGGGCGTAGGCCCTGACATGCAGGCTCGCATCGGCGCATTCATGGGGAAAGGCCGAAGCTGAG
CCCGAACAAGGGGACTGAAC

Downstream 100 bases:

>100_bases
GCTTCAGCGCTGCTTAACCGTGAACACGGTGCGGCGGTTGCGGGCATGCGCCTCAGCCGTCGACCCGGTGTCGATGGGCT
GGGTTTCGCCATAGCCCACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MADFLIRRSNLRDTSWVNTPLPPLADGQARLKVDAFALTANNVTYASFGEAMGYWNFFPAADPAFGRVPVWGFATVTASK
AEGVAPGARVYGYLPISDEFDIQPVRVSAASFMDGAAHRQGLAPIYNTYIFNAADPSYDPAFEAQQMLFRPLFTTGWMID
DCLMETGTEIPETVVISSASSKTALALAHCLKQRGAVEAIGLTSPANKDYVEASGLYARTTTYDDVDRLHARGLSAYVDF
VGRPALTADVHHALKDRLVRSLVIGVTDWEGNRAPVDAPGPQPEFFFVPTYAAERAKALGADELNARTSKALAGFYSASA
KYLTPLKQSGQDAIKTAWQQTLDAKIPPSKGLILSF

Sequences:

>Translated_356_residues
MADFLIRRSNLRDTSWVNTPLPPLADGQARLKVDAFALTANNVTYASFGEAMGYWNFFPAADPAFGRVPVWGFATVTASK
AEGVAPGARVYGYLPISDEFDIQPVRVSAASFMDGAAHRQGLAPIYNTYIFNAADPSYDPAFEAQQMLFRPLFTTGWMID
DCLMETGTEIPETVVISSASSKTALALAHCLKQRGAVEAIGLTSPANKDYVEASGLYARTTTYDDVDRLHARGLSAYVDF
VGRPALTADVHHALKDRLVRSLVIGVTDWEGNRAPVDAPGPQPEFFFVPTYAAERAKALGADELNARTSKALAGFYSASA
KYLTPLKQSGQDAIKTAWQQTLDAKIPPSKGLILSF
>Mature_355_residues
ADFLIRRSNLRDTSWVNTPLPPLADGQARLKVDAFALTANNVTYASFGEAMGYWNFFPAADPAFGRVPVWGFATVTASKA
EGVAPGARVYGYLPISDEFDIQPVRVSAASFMDGAAHRQGLAPIYNTYIFNAADPSYDPAFEAQQMLFRPLFTTGWMIDD
CLMETGTEIPETVVISSASSKTALALAHCLKQRGAVEAIGLTSPANKDYVEASGLYARTTTYDDVDRLHARGLSAYVDFV
GRPALTADVHHALKDRLVRSLVIGVTDWEGNRAPVDAPGPQPEFFFVPTYAAERAKALGADELNARTSKALAGFYSASAK
YLTPLKQSGQDAIKTAWQQTLDAKIPPSKGLILSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38547; Mature: 38416

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFLIRRSNLRDTSWVNTPLPPLADGQARLKVDAFALTANNVTYASFGEAMGYWNFFPA
CCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEHHHHHHHCCCCCCCC
ADPAFGRVPVWGFATVTASKAEGVAPGARVYGYLPISDEFDIQPVRVSAASFMDGAAHRQ
CCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHC
GLAPIYNTYIFNAADPSYDPAFEAQQMLFRPLFTTGWMIDDCLMETGTEIPETVVISSAS
CCCHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCC
SKTALALAHCLKQRGAVEAIGLTSPANKDYVEASGLYARTTTYDDVDRLHARGLSAYVDF
CHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCEEEECCCHHHHHHHHHCCHHHHHHH
VGRPALTADVHHALKDRLVRSLVIGVTDWEGNRAPVDAPGPQPEFFFVPTYAAERAKALG
HCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCC
ADELNARTSKALAGFYSASAKYLTPLKQSGQDAIKTAWQQTLDAKIPPSKGLILSF
CHHHHHHHHHHHHHHHHCCCHHHCHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEC
>Mature Secondary Structure 
ADFLIRRSNLRDTSWVNTPLPPLADGQARLKVDAFALTANNVTYASFGEAMGYWNFFPA
CCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEHHHHHHHCCCCCCCC
ADPAFGRVPVWGFATVTASKAEGVAPGARVYGYLPISDEFDIQPVRVSAASFMDGAAHRQ
CCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHC
GLAPIYNTYIFNAADPSYDPAFEAQQMLFRPLFTTGWMIDDCLMETGTEIPETVVISSAS
CCCHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCC
SKTALALAHCLKQRGAVEAIGLTSPANKDYVEASGLYARTTTYDDVDRLHARGLSAYVDF
CHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCEEEECCCHHHHHHHHHCCHHHHHHH
VGRPALTADVHHALKDRLVRSLVIGVTDWEGNRAPVDAPGPQPEFFFVPTYAAERAKALG
HCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCC
ADELNARTSKALAGFYSASAKYLTPLKQSGQDAIKTAWQQTLDAKIPPSKGLILSF
CHHHHHHHHHHHHHHHHCCCHHHCHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA