| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114797759
Identifier: 114797759
GI number: 114797759
Start: 951142
End: 952212
Strand: Reverse
Name: 114797759
Synonym: HNE_0936
Alternate gene names: NA
Gene position: 952212-951142 (Counterclockwise)
Preceding gene: 114797130
Following gene: 114799794
Centisome position: 25.7
GC content: 62.65
Gene sequence:
>1071_bases TTGGCTGACTTTCTGATCCGGCGCAGCAATCTGCGCGACACTTCCTGGGTAAACACGCCGCTGCCGCCACTGGCAGATGG ACAGGCGCGGCTGAAGGTGGACGCCTTCGCGCTGACGGCAAACAACGTCACCTATGCCAGCTTTGGCGAGGCGATGGGCT ATTGGAACTTCTTCCCGGCGGCTGATCCGGCCTTCGGCCGCGTGCCTGTCTGGGGTTTTGCCACCGTTACCGCGTCCAAG GCTGAAGGCGTTGCGCCCGGTGCGCGCGTCTATGGATACCTGCCGATCTCGGATGAGTTCGACATCCAGCCCGTGCGTGT CAGCGCGGCGAGCTTTATGGACGGCGCCGCCCATCGCCAGGGGCTCGCACCCATTTACAACACCTACATCTTCAACGCGG CAGACCCGTCTTACGATCCGGCTTTCGAAGCCCAGCAGATGCTGTTCCGCCCCCTGTTCACCACCGGCTGGATGATTGAT GACTGCCTGATGGAGACGGGCACGGAGATCCCGGAAACGGTTGTGATTTCGTCGGCCTCGTCCAAGACCGCGCTCGCCCT CGCCCATTGCCTGAAACAGCGCGGCGCCGTGGAAGCCATCGGCCTCACCTCACCGGCCAACAAGGACTATGTCGAAGCCT CCGGCCTCTATGCGCGCACCACAACCTATGACGATGTGGACCGGCTGCACGCGCGGGGGCTTTCGGCCTATGTCGACTTT GTGGGGCGCCCGGCACTCACCGCCGATGTCCATCATGCGCTGAAGGACCGGCTGGTCCGCAGCCTTGTGATCGGTGTGAC GGATTGGGAAGGTAATCGCGCGCCGGTTGACGCGCCGGGTCCACAGCCGGAATTCTTCTTTGTGCCGACATATGCCGCCG AGCGCGCAAAAGCGCTGGGCGCGGATGAACTGAACGCCAGAACCAGCAAGGCGCTGGCAGGCTTCTATTCGGCCTCAGCC AAATATCTCACGCCCCTCAAACAGAGCGGTCAGGACGCCATCAAGACCGCCTGGCAACAAACGCTCGACGCGAAGATCCC GCCCTCAAAAGGGCTGATCCTCAGCTTCTGA
Upstream 100 bases:
>100_bases GGAAATACTTAACAATGAGGGCGTAGGCCCTGACATGCAGGCTCGCATCGGCGCATTCATGGGGAAAGGCCGAAGCTGAG CCCGAACAAGGGGACTGAAC
Downstream 100 bases:
>100_bases GCTTCAGCGCTGCTTAACCGTGAACACGGTGCGGCGGTTGCGGGCATGCGCCTCAGCCGTCGACCCGGTGTCGATGGGCT GGGTTTCGCCATAGCCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MADFLIRRSNLRDTSWVNTPLPPLADGQARLKVDAFALTANNVTYASFGEAMGYWNFFPAADPAFGRVPVWGFATVTASK AEGVAPGARVYGYLPISDEFDIQPVRVSAASFMDGAAHRQGLAPIYNTYIFNAADPSYDPAFEAQQMLFRPLFTTGWMID DCLMETGTEIPETVVISSASSKTALALAHCLKQRGAVEAIGLTSPANKDYVEASGLYARTTTYDDVDRLHARGLSAYVDF VGRPALTADVHHALKDRLVRSLVIGVTDWEGNRAPVDAPGPQPEFFFVPTYAAERAKALGADELNARTSKALAGFYSASA KYLTPLKQSGQDAIKTAWQQTLDAKIPPSKGLILSF
Sequences:
>Translated_356_residues MADFLIRRSNLRDTSWVNTPLPPLADGQARLKVDAFALTANNVTYASFGEAMGYWNFFPAADPAFGRVPVWGFATVTASK AEGVAPGARVYGYLPISDEFDIQPVRVSAASFMDGAAHRQGLAPIYNTYIFNAADPSYDPAFEAQQMLFRPLFTTGWMID DCLMETGTEIPETVVISSASSKTALALAHCLKQRGAVEAIGLTSPANKDYVEASGLYARTTTYDDVDRLHARGLSAYVDF VGRPALTADVHHALKDRLVRSLVIGVTDWEGNRAPVDAPGPQPEFFFVPTYAAERAKALGADELNARTSKALAGFYSASA KYLTPLKQSGQDAIKTAWQQTLDAKIPPSKGLILSF >Mature_355_residues ADFLIRRSNLRDTSWVNTPLPPLADGQARLKVDAFALTANNVTYASFGEAMGYWNFFPAADPAFGRVPVWGFATVTASKA EGVAPGARVYGYLPISDEFDIQPVRVSAASFMDGAAHRQGLAPIYNTYIFNAADPSYDPAFEAQQMLFRPLFTTGWMIDD CLMETGTEIPETVVISSASSKTALALAHCLKQRGAVEAIGLTSPANKDYVEASGLYARTTTYDDVDRLHARGLSAYVDFV GRPALTADVHHALKDRLVRSLVIGVTDWEGNRAPVDAPGPQPEFFFVPTYAAERAKALGADELNARTSKALAGFYSASAK YLTPLKQSGQDAIKTAWQQTLDAKIPPSKGLILSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38547; Mature: 38416
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFLIRRSNLRDTSWVNTPLPPLADGQARLKVDAFALTANNVTYASFGEAMGYWNFFPA CCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEHHHHHHHCCCCCCCC ADPAFGRVPVWGFATVTASKAEGVAPGARVYGYLPISDEFDIQPVRVSAASFMDGAAHRQ CCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHC GLAPIYNTYIFNAADPSYDPAFEAQQMLFRPLFTTGWMIDDCLMETGTEIPETVVISSAS CCCHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCC SKTALALAHCLKQRGAVEAIGLTSPANKDYVEASGLYARTTTYDDVDRLHARGLSAYVDF CHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCEEEECCCHHHHHHHHHCCHHHHHHH VGRPALTADVHHALKDRLVRSLVIGVTDWEGNRAPVDAPGPQPEFFFVPTYAAERAKALG HCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCC ADELNARTSKALAGFYSASAKYLTPLKQSGQDAIKTAWQQTLDAKIPPSKGLILSF CHHHHHHHHHHHHHHHHCCCHHHCHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEC >Mature Secondary Structure ADFLIRRSNLRDTSWVNTPLPPLADGQARLKVDAFALTANNVTYASFGEAMGYWNFFPA CCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEHHHHHHHCCCCCCCC ADPAFGRVPVWGFATVTASKAEGVAPGARVYGYLPISDEFDIQPVRVSAASFMDGAAHRQ CCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHHC GLAPIYNTYIFNAADPSYDPAFEAQQMLFRPLFTTGWMIDDCLMETGTEIPETVVISSAS CCCHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCC SKTALALAHCLKQRGAVEAIGLTSPANKDYVEASGLYARTTTYDDVDRLHARGLSAYVDF CHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCEEEECCCHHHHHHHHHCCHHHHHHH VGRPALTADVHHALKDRLVRSLVIGVTDWEGNRAPVDAPGPQPEFFFVPTYAAERAKALG HCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCC ADELNARTSKALAGFYSASAKYLTPLKQSGQDAIKTAWQQTLDAKIPPSKGLILSF CHHHHHHHHHHHHHHHHCCCHHHCHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA