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The map label for this gene is petB [H]

Identifier: 114797745

GI number: 114797745

Start: 343795

End: 345255

Strand: Direct

Name: petB [H]

Synonym: HNE_0351

Alternate gene names: 114797745

Gene position: 343795-345255 (Clockwise)

Preceding gene: 114798737

Following gene: 114797363

Centisome position: 9.28

GC content: 60.64

Gene sequence:

>1461_bases
ATGAGCGGACATGACTCCAAATACACGCCCAACTCTGCCTTTGAGCGCTGGCTAGACACCCGCCTGCCGATCATTCGCTT
TGCGAATGATACGATGATCACATTCCCGACGCCGAAAAACCTGAACTACTGGTACATTTTCGGCGGCGTTCTGGCCGTCT
GTCTGGCCATCCAGATCATCACCGGCGTTATCCTGGCCATGCACTATGAAGCCAGCGTCGATGGCGCCTTTGCTTCGGTC
GAGCGCATCATGCGCGACGTGCCCTATGGCTGGCTGCTGCGCTACGTCCACGCCAACGGCGCCTCGATGTTCTTCCTCGC
CGTTTACCTCCACATGTTCCGCGGTCTCTATTACGGCTCCTACAAGGCGCCCCGCGAAGTGCTGTGGATCATCGGCTGCG
TGATCTACCTCCTGATGATGGCCACGGCCTTCCTCGGCTACATGCTGCCCTGGGGCCAGATGTCCTATCACGGCTCGAAC
GTGATCACCGGCCTCTTTGGCGCCATTCCGCTGGTCGGCGAAAGCATCCAGACCTGGCTGATGGGTGGCCCTTCGATCGG
TAACCAGACGCTCCAGCGCTTCTTCTCGCTGCACTATCTGTTGCCCTTCATGATCGCCGGCGCTGTCATCCTGCACATCT
GGGCGCTGCACGTTCCGGGCAACACCAACCCGACCGGTGTTGAAGTGAAAGACATCGAGAAAGACACCGTGCCCTTCCAC
CCGTACTACACGGTGAAGGATGCCTTCGGCATCGTGCTCTTCCTGATCATGTTTGCCGTCTTCGTCTTCTATGCGCCCAA
CGTTCTGGGCCATGCCGACAACTACATCGAGGCGAACGCCCTGGTGACCCCGGCCCACATCGTGCCTGAATGGTATCTGC
TGCCGTTCTACGCGATCCTGCGCGCCATCACCTTCGACCTTGGCCCCATCGATGCCAAACTCCTCGGCGTCATCTTCATG
TTCGCCGCCATTGCAGTGCTCTTCCTGCTGCCCTGGCTCGACACGTCGAAGGTCAAGTCGATGCGCTACCGTCCGGTGGC
CCGTCAGTTCTTCTTCGGCTTCCTGGTCGTCTGCTTCCTGCTTGGCTGGTGCGGCGCGGCCAATCCGGACGACGCGGTCA
TCCCGGCGCTGCAGGGCGATCCGAGCCTGGTGGTGAGCTACACGGTGGAGGGCGCCCCGGCGACCACCACCTACAAAGGC
GGCGATGAAGCGTTTGAAGAAGCCCGCGCCTTCATGGCCAGCCTGCCGGCCGGTACCAACCCCAGCCTCTCGGCTGTTCC
GGCGCCGACCTTCGCCTTCCGCCACCTGTCGCTGATTCTGACCTTCCTGTACTTCGGCTACTTCGTGGCCCTGTTCTTCA
TCGGCCTGACCGAGAAGCCGAAGGCACTGCCGGAATCGATCCATAAATCCGTGCTGAAGCGTAAGCCCAAGGAAACGGGC
AATGCAGTGCCGGCTGAGTAA

Upstream 100 bases:

>100_bases
TATCCGCAAAGGTCCCGCCCCGTCGAACCTTCCCGTCCCCAACTATCGCTGGGTCTCTGACTCGGTCGTCAACATCTCCC
TCTGAGAAGGACACCTTTAG

Downstream 100 bases:

>100_bases
GATGCAAGCTGGGGAAAGAAAGAACATGAAAACCTTCCGCATCCTCGCTGCTGGCCTGATGGGCCTGGCCTTTGCAGGCC
TCGCCCATGCTGCAGGCGGC

Product: putative ubiquinol-cytochrome c reductase, cytochrome b

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MSGHDSKYTPNSAFERWLDTRLPIIRFANDTMITFPTPKNLNYWYIFGGVLAVCLAIQIITGVILAMHYEASVDGAFASV
ERIMRDVPYGWLLRYVHANGASMFFLAVYLHMFRGLYYGSYKAPREVLWIIGCVIYLLMMATAFLGYMLPWGQMSYHGSN
VITGLFGAIPLVGESIQTWLMGGPSIGNQTLQRFFSLHYLLPFMIAGAVILHIWALHVPGNTNPTGVEVKDIEKDTVPFH
PYYTVKDAFGIVLFLIMFAVFVFYAPNVLGHADNYIEANALVTPAHIVPEWYLLPFYAILRAITFDLGPIDAKLLGVIFM
FAAIAVLFLLPWLDTSKVKSMRYRPVARQFFFGFLVVCFLLGWCGAANPDDAVIPALQGDPSLVVSYTVEGAPATTTYKG
GDEAFEEARAFMASLPAGTNPSLSAVPAPTFAFRHLSLILTFLYFGYFVALFFIGLTEKPKALPESIHKSVLKRKPKETG
NAVPAE

Sequences:

>Translated_486_residues
MSGHDSKYTPNSAFERWLDTRLPIIRFANDTMITFPTPKNLNYWYIFGGVLAVCLAIQIITGVILAMHYEASVDGAFASV
ERIMRDVPYGWLLRYVHANGASMFFLAVYLHMFRGLYYGSYKAPREVLWIIGCVIYLLMMATAFLGYMLPWGQMSYHGSN
VITGLFGAIPLVGESIQTWLMGGPSIGNQTLQRFFSLHYLLPFMIAGAVILHIWALHVPGNTNPTGVEVKDIEKDTVPFH
PYYTVKDAFGIVLFLIMFAVFVFYAPNVLGHADNYIEANALVTPAHIVPEWYLLPFYAILRAITFDLGPIDAKLLGVIFM
FAAIAVLFLLPWLDTSKVKSMRYRPVARQFFFGFLVVCFLLGWCGAANPDDAVIPALQGDPSLVVSYTVEGAPATTTYKG
GDEAFEEARAFMASLPAGTNPSLSAVPAPTFAFRHLSLILTFLYFGYFVALFFIGLTEKPKALPESIHKSVLKRKPKETG
NAVPAE
>Mature_485_residues
SGHDSKYTPNSAFERWLDTRLPIIRFANDTMITFPTPKNLNYWYIFGGVLAVCLAIQIITGVILAMHYEASVDGAFASVE
RIMRDVPYGWLLRYVHANGASMFFLAVYLHMFRGLYYGSYKAPREVLWIIGCVIYLLMMATAFLGYMLPWGQMSYHGSNV
ITGLFGAIPLVGESIQTWLMGGPSIGNQTLQRFFSLHYLLPFMIAGAVILHIWALHVPGNTNPTGVEVKDIEKDTVPFHP
YYTVKDAFGIVLFLIMFAVFVFYAPNVLGHADNYIEANALVTPAHIVPEWYLLPFYAILRAITFDLGPIDAKLLGVIFMF
AAIAVLFLLPWLDTSKVKSMRYRPVARQFFFGFLVVCFLLGWCGAANPDDAVIPALQGDPSLVVSYTVEGAPATTTYKGG
DEAFEEARAFMASLPAGTNPSLSAVPAPTFAFRHLSLILTFLYFGYFVALFFIGLTEKPKALPESIHKSVLKRKPKETGN
AVPAE

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=344, Percent_Identity=45.0581395348837, Blast_Score=295, Evalue=6e-80,
Organism=Saccharomyces cerevisiae, GI6226529, Length=346, Percent_Identity=52.3121387283237, Blast_Score=343, Evalue=3e-95,
Organism=Saccharomyces cerevisiae, GI6226532, Length=247, Percent_Identity=51.417004048583, Blast_Score=265, Evalue=1e-71,
Organism=Saccharomyces cerevisiae, GI6226531, Length=159, Percent_Identity=53.4591194968553, Blast_Score=176, Evalue=6e-45,
Organism=Saccharomyces cerevisiae, GI6226530, Length=149, Percent_Identity=48.3221476510067, Blast_Score=149, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 54068; Mature: 53937

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHDSKYTPNSAFERWLDTRLPIIRFANDTMITFPTPKNLNYWYIFGGVLAVCLAIQII
CCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHH
TGVILAMHYEASVDGAFASVERIMRDVPYGWLLRYVHANGASMFFLAVYLHMFRGLYYGS
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
YKAPREVLWIIGCVIYLLMMATAFLGYMLPWGQMSYHGSNVITGLFGAIPLVGESIQTWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MGGPSIGNQTLQRFFSLHYLLPFMIAGAVILHIWALHVPGNTNPTGVEVKDIEKDTVPFH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCCCC
PYYTVKDAFGIVLFLIMFAVFVFYAPNVLGHADNYIEANALVTPAHIVPEWYLLPFYAIL
CCEEHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEECCCEECCHHHCCHHHHHHHHHHH
RAITFDLGPIDAKLLGVIFMFAAIAVLFLLPWLDTSKVKSMRYRPVARQFFFGFLVVCFL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWCGAANPDDAVIPALQGDPSLVVSYTVEGAPATTTYKGGDEAFEEARAFMASLPAGTN
HHHCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PSLSAVPAPTFAFRHLSLILTFLYFGYFVALFFIGLTEKPKALPESIHKSVLKRKPKETG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHCC
NAVPAE
CCCCCC
>Mature Secondary Structure 
SGHDSKYTPNSAFERWLDTRLPIIRFANDTMITFPTPKNLNYWYIFGGVLAVCLAIQII
CCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHH
TGVILAMHYEASVDGAFASVERIMRDVPYGWLLRYVHANGASMFFLAVYLHMFRGLYYGS
HHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
YKAPREVLWIIGCVIYLLMMATAFLGYMLPWGQMSYHGSNVITGLFGAIPLVGESIQTWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MGGPSIGNQTLQRFFSLHYLLPFMIAGAVILHIWALHVPGNTNPTGVEVKDIEKDTVPFH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCCCC
PYYTVKDAFGIVLFLIMFAVFVFYAPNVLGHADNYIEANALVTPAHIVPEWYLLPFYAIL
CCEEHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEECCCEECCHHHCCHHHHHHHHHHH
RAITFDLGPIDAKLLGVIFMFAAIAVLFLLPWLDTSKVKSMRYRPVARQFFFGFLVVCFL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWCGAANPDDAVIPALQGDPSLVVSYTVEGAPATTTYKGGDEAFEEARAFMASLPAGTN
HHHCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PSLSAVPAPTFAFRHLSLILTFLYFGYFVALFFIGLTEKPKALPESIHKSVLKRKPKETG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHCC
NAVPAE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2560136 [H]