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The map label for this gene is petA [H]

Identifier: 114798737

GI number: 114798737

Start: 343216

End: 343779

Strand: Direct

Name: petA [H]

Synonym: HNE_0350

Alternate gene names: 114798737

Gene position: 343216-343779 (Clockwise)

Preceding gene: 114797849

Following gene: 114797745

Centisome position: 9.26

GC content: 64.36

Gene sequence:

>564_bases
GTGACGACAGAGACCCACGCCGAGGCGGTCGATGAAGACCGCCGCAACTTTATTCACATCGCCACAGGCTCCGTCGCGCT
CGGCGGCGCCGCCATGTTCGCCTGGACACTGGTAGACCAGTGGAATCCGGCCGCGGATACCCGCGCGGCATCGGCGCTGG
ACGTCGATGTTTCCAAGGTTCCGCTTGGCGGCGAGATCCGCATCCTGATCGGCGGCAAGCCGTTCTTCGTGCGCCACCGC
ACCCCGTCCGAAATCTCGGCGGCCGAATCGGTGAACGTTTCGATCCTGCCAGATCCTGAAACCGACGAAGCCCGTCTTCG
CCCGAAAGCCGATGGCTCGCTGAACAAGGCGATTCTCGTCACCTCCGGTTCCTGCACCCACCTTGGCTGCGTCCCGGTCG
GCCCGTCTCAGGGCAATACGGGTGATTATGGCGGCTGGTACTGCCCCTGCCACGGGTCGCACTACGACACGTCGGGCCGT
ATCCGCAAAGGTCCCGCCCCGTCGAACCTTCCCGTCCCCAACTATCGCTGGGTCTCTGACTCGGTCGTCAACATCTCCCT
CTGA

Upstream 100 bases:

>100_bases
AAGATTCTGCCGCGCCCCGCGCCCACTTGCCGCAATGTGCGGCCCGCGCAGCTTTAGTAAAGACAGCGGCTAACGCCACG
CACCAGGGACGGATAGACAC

Downstream 100 bases:

>100_bases
GAAGGACACCTTTAGATGAGCGGACATGACTCCAAATACACGCCCAACTCTGCCTTTGAGCGCTGGCTAGACACCCGCCT
GCCGATCATTCGCTTTGCGA

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTTETHAEAVDEDRRNFIHIATGSVALGGAAMFAWTLVDQWNPAADTRAASALDVDVSKVPLGGEIRILIGGKPFFVRHR
TPSEISAAESVNVSILPDPETDEARLRPKADGSLNKAILVTSGSCTHLGCVPVGPSQGNTGDYGGWYCPCHGSHYDTSGR
IRKGPAPSNLPVPNYRWVSDSVVNISL

Sequences:

>Translated_187_residues
MTTETHAEAVDEDRRNFIHIATGSVALGGAAMFAWTLVDQWNPAADTRAASALDVDVSKVPLGGEIRILIGGKPFFVRHR
TPSEISAAESVNVSILPDPETDEARLRPKADGSLNKAILVTSGSCTHLGCVPVGPSQGNTGDYGGWYCPCHGSHYDTSGR
IRKGPAPSNLPVPNYRWVSDSVVNISL
>Mature_186_residues
TTETHAEAVDEDRRNFIHIATGSVALGGAAMFAWTLVDQWNPAADTRAASALDVDVSKVPLGGEIRILIGGKPFFVRHRT
PSEISAAESVNVSILPDPETDEARLRPKADGSLNKAILVTSGSCTHLGCVPVGPSQGNTGDYGGWYCPCHGSHYDTSGRI
RKGPAPSNLPVPNYRWVSDSVVNISL

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=177, Percent_Identity=42.9378531073446, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17540418, Length=188, Percent_Identity=42.0212765957447, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6320811, Length=180, Percent_Identity=43.3333333333333, Blast_Score=155, Evalue=3e-39,
Organism=Drosophila melanogaster, GI24580896, Length=150, Percent_Identity=42.6666666666667, Blast_Score=134, Evalue=4e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 19879; Mature: 19748

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTETHAEAVDEDRRNFIHIATGSVALGGAAMFAWTLVDQWNPAADTRAASALDVDVSKV
CCCCCHHHHHCCCCCCEEEEEECCEEECCHHEEEEEEECCCCCCCCCCCCEEEECCCEEC
PLGGEIRILIGGKPFFVRHRTPSEISAAESVNVSILPDPETDEARLRPKADGSLNKAILV
CCCCEEEEEECCCEEEEEECCCCCCCHHHCCEEEECCCCCCCCCEECCCCCCCCCEEEEE
TSGSCTHLGCVPVGPSQGNTGDYGGWYCPCHGSHYDTSGRIRKGPAPSNLPVPNYRWVSD
ECCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCCEEECCC
SVVNISL
CEEEEEC
>Mature Secondary Structure 
TTETHAEAVDEDRRNFIHIATGSVALGGAAMFAWTLVDQWNPAADTRAASALDVDVSKV
CCCCHHHHHCCCCCCEEEEEECCEEECCHHEEEEEEECCCCCCCCCCCCEEEECCCEEC
PLGGEIRILIGGKPFFVRHRTPSEISAAESVNVSILPDPETDEARLRPKADGSLNKAILV
CCCCEEEEEECCCEEEEEECCCCCCCHHHCCEEEECCCCCCCCCEECCCCCCCCCEEEEE
TSGSCTHLGCVPVGPSQGNTGDYGGWYCPCHGSHYDTSGRIRKGPAPSNLPVPNYRWVSD
ECCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCCEEECCC
SVVNISL
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2176269 [H]