| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797615
Identifier: 114797615
GI number: 114797615
Start: 131539
End: 132684
Strand: Direct
Name: 114797615
Synonym: HNE_0149
Alternate gene names: NA
Gene position: 131539-132684 (Clockwise)
Preceding gene: 114800414
Following gene: 114797377
Centisome position: 3.55
GC content: 62.83
Gene sequence:
>1146_bases ATGGCGCTGGGATGGGATAAGATAGAACAGACAGAAGGCTTTGCCGGGCTGCGCGCCCACGCAGAGGCGCAGGTGCTGCC TTTGCTGGAGGGCGCGGACCTGCGCCCGGTGGACGCAAAGGCGCTGACGGGGCGTCTCGGCGGGGCGGTGTCGGGCGGGT TCATTTTCTTTGTCATCAGCTTCCTGATCGTTCAGGGGCTTTTGCCAAATAACTGGTGGGGCGAAACGCTCGTCTTCATT CTTTTCCCGCTTCTCTTTCTGGGCAGCATTTTGGGGGCCCTTTTTCTTTTCCGGCGCAGCCTTATTCGGGTGCTGATGGA CGCAAAGGCGCGGTTCATCATCCGGGGCCGGGCGCTCTCGGCGCTCTCTGCGCCTCTGGGGCTTTCCTATGTCGCAACGC CCGGCGGCGCGCCCGCGCCCCTCAAATGGCTGGCCCAGCAATCCTGGGCGCCGGCTGAACTCCGCGATCTGACGGCCACG TTCGAGGCGGAAGGTGGCATGGATGATGCGGTGGCCGCAGCGCGGGAGGCAGGACTGATGATTGAGTCCAATGTCTATGT CGTCGGCACCAGGGAACAGAAGGAACGCTATCAGGAGATGGCCGCCACTCAGGCGACGGTGGAAGACGGTTTCCACGGTG TTCGGCGCGGCATCGGATTTGATATGTTCGAATGGGTGGAGCGGGTTGAGGACGCGCCCGACATTCATCATCTGGTGATT GTATTGGACGCGCCGCTCGATCTGCACGGGATCACGCAGCTCAGGGCGCGCAAGGCGGGGTGGCCGCAAGAAGCCTCCCC GGCACGGTTTGAGGAGATTGACCTTGGTCCGAAAGCCTTTGACGCGGCCTACCGCCTCCGGTCTACCGATCAGGTGGAGG CCCGCGCGATCTTCAATCCGGCGGTAATCGAGCGCGTGATCGGTCTGGCGCATGATGGCAAGTTTCGCGCTGTCGCCAAG GGGCGGCGTCTCGTGTTCGACTTTCCCGGCGTGAACCGGTTTTCCCTGATCGATGTCGTCACTGGGGACTGGAGCGAGGA CACGCTGCGGCAGACGGCTTCGGACATGGCAGAAGCACTCACCCTCGTCGATACGCTCGCCCACGCCTTCATGCTGGCGC GCAAGTCTGATACGGGCACGGTATGA
Upstream 100 bases:
>100_bases GGAAGGGAGGTGTGGCTCGGGCATGGCCCTGCTTACACCCGGCTGGCCTCCCCCTGTTATGAGGGATGACGCCGCATGGA GGCCCTGCTAGCTTCCGGTC
Downstream 100 bases:
>100_bases GCTTACCTGATCTTGATTCTGAAAACTTTGACGTGGCCCGCCAGCACTGGATCGCCGTGCGCGTCTATTATGAAGACACA GACTTCACCGGCATGGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MALGWDKIEQTEGFAGLRAHAEAQVLPLLEGADLRPVDAKALTGRLGGAVSGGFIFFVISFLIVQGLLPNNWWGETLVFI LFPLLFLGSILGALFLFRRSLIRVLMDAKARFIIRGRALSALSAPLGLSYVATPGGAPAPLKWLAQQSWAPAELRDLTAT FEAEGGMDDAVAAAREAGLMIESNVYVVGTREQKERYQEMAATQATVEDGFHGVRRGIGFDMFEWVERVEDAPDIHHLVI VLDAPLDLHGITQLRARKAGWPQEASPARFEEIDLGPKAFDAAYRLRSTDQVEARAIFNPAVIERVIGLAHDGKFRAVAK GRRLVFDFPGVNRFSLIDVVTGDWSEDTLRQTASDMAEALTLVDTLAHAFMLARKSDTGTV
Sequences:
>Translated_381_residues MALGWDKIEQTEGFAGLRAHAEAQVLPLLEGADLRPVDAKALTGRLGGAVSGGFIFFVISFLIVQGLLPNNWWGETLVFI LFPLLFLGSILGALFLFRRSLIRVLMDAKARFIIRGRALSALSAPLGLSYVATPGGAPAPLKWLAQQSWAPAELRDLTAT FEAEGGMDDAVAAAREAGLMIESNVYVVGTREQKERYQEMAATQATVEDGFHGVRRGIGFDMFEWVERVEDAPDIHHLVI VLDAPLDLHGITQLRARKAGWPQEASPARFEEIDLGPKAFDAAYRLRSTDQVEARAIFNPAVIERVIGLAHDGKFRAVAK GRRLVFDFPGVNRFSLIDVVTGDWSEDTLRQTASDMAEALTLVDTLAHAFMLARKSDTGTV >Mature_380_residues ALGWDKIEQTEGFAGLRAHAEAQVLPLLEGADLRPVDAKALTGRLGGAVSGGFIFFVISFLIVQGLLPNNWWGETLVFIL FPLLFLGSILGALFLFRRSLIRVLMDAKARFIIRGRALSALSAPLGLSYVATPGGAPAPLKWLAQQSWAPAELRDLTATF EAEGGMDDAVAAAREAGLMIESNVYVVGTREQKERYQEMAATQATVEDGFHGVRRGIGFDMFEWVERVEDAPDIHHLVIV LDAPLDLHGITQLRARKAGWPQEASPARFEEIDLGPKAFDAAYRLRSTDQVEARAIFNPAVIERVIGLAHDGKFRAVAKG RRLVFDFPGVNRFSLIDVVTGDWSEDTLRQTASDMAEALTLVDTLAHAFMLARKSDTGTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41669; Mature: 41538
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGWDKIEQTEGFAGLRAHAEAQVLPLLEGADLRPVDAKALTGRLGGAVSGGFIFFVIS CCCCCHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH FLIVQGLLPNNWWGETLVFILFPLLFLGSILGALFLFRRSLIRVLMDAKARFIIRGRALS HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHH ALSAPLGLSYVATPGGAPAPLKWLAQQSWAPAELRDLTATFEAEGGMDDAVAAAREAGLM HHHCCCCCEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCEE IESNVYVVGTREQKERYQEMAATQATVEDGFHGVRRGIGFDMFEWVERVEDAPDIHHLVI EECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEE VLDAPLDLHGITQLRARKAGWPQEASPARFEEIDLGPKAFDAAYRLRSTDQVEARAIFNP EEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCH AVIERVIGLAHDGKFRAVAKGRRLVFDFPGVNRFSLIDVVTGDWSEDTLRQTASDMAEAL HHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH TLVDTLAHAFMLARKSDTGTV HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALGWDKIEQTEGFAGLRAHAEAQVLPLLEGADLRPVDAKALTGRLGGAVSGGFIFFVIS CCCCHHHHHHCCCHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH FLIVQGLLPNNWWGETLVFILFPLLFLGSILGALFLFRRSLIRVLMDAKARFIIRGRALS HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHH ALSAPLGLSYVATPGGAPAPLKWLAQQSWAPAELRDLTATFEAEGGMDDAVAAAREAGLM HHHCCCCCEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCEE IESNVYVVGTREQKERYQEMAATQATVEDGFHGVRRGIGFDMFEWVERVEDAPDIHHLVI EECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEE VLDAPLDLHGITQLRARKAGWPQEASPARFEEIDLGPKAFDAAYRLRSTDQVEARAIFNP EEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCH AVIERVIGLAHDGKFRAVAKGRRLVFDFPGVNRFSLIDVVTGDWSEDTLRQTASDMAEAL HHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH TLVDTLAHAFMLARKSDTGTV HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA