| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is iorB [H]
Identifier: 114797470
GI number: 114797470
Start: 2297397
End: 2299526
Strand: Direct
Name: iorB [H]
Synonym: HNE_2202
Alternate gene names: 114797470
Gene position: 2297397-2299526 (Clockwise)
Preceding gene: 114797647
Following gene: 114797204
Centisome position: 62.01
GC content: 62.21
Gene sequence:
>2130_bases ATGACGCGCCGCCGGATGATCCTGGGCGGCAGCCTCGTCGGAGGCGCTCTGATCGTCGGCTATGGCGTTACCCACCCGAT GCAGATTGCCGGGGCCGTCCTGGGAGGGGACCCAAATCCCGAGGACAGTGCGTTCGGCCCGTTCATCCGGATGGCTCCCG ATGGCTGGGTGACCGTCGTCAACAAACAACAGGAGATGGGTCAGGGTATTCATGCTGGCCTGGCCGCGATGGTGGCCGAA GAACTCGACGCGGACTGGGACCGTGTCCGCGTGATTGACGCGGACAGCAATTTCCGGGCGTACGGCGCACAGGGGACGGC AGGCTCCCGATCGGTGGCATCAAACTGGGACGCCATGCGGAATGCCGGCGCCGCCGCCCGCGCCATGTTCGTGAGCGCTG CAGCCCGGCTCTGGACTACGCCACAGAATTTCATCCAGGTCCGGGACGGGATTGTGTCCGACGCTCAATCCGGGCGCAGC GCGCCCTTTGCCGAGCTGCTCGCCGCCGCCGCAGCTGAGACGCCGCCCCGGACACCGATACTCAAACAACCCGACGCCTA CCGGTTGATCGGGACAGACCGTGTCCGGCGTAAGGACTGTGGTCCGAAGACAACCGGCGCGCATATCTATACGCAGGATA TTCAGCATCCGGATCTTCTTGTCGCGATGGTCGCGCACAGCCCCCGCTTCGGTGGAACACTGGCCCGTTTTGACGCCTCC GATGCCCTTCAGGTCAAGGGGGTCGTTGACGTCTTTGCAATTGAGACTGGCGTTGCCGTGCTGGCTGAGAATACGGTCTC AGCCCGCCGGGGGCGGGATGCGCTGAGAATCGAATGGGACGATGAGGAAGCGGAAACCCGCTCCACACCGGATCTTGTGC GTGAATATCACGAGATTGGATCCGGACGCACCAGCCTGCGCCCCGACATTCTGGAGGCGCGGGGCGACACGGCGGCGGAA TTCGGGACGGATGCGATCGAGTTTATGATCGATTTCCCCTTTCTCGCCCATGCCCCTATGGAAACGATGGATTGCGTCGC CCGGGTCGACGGCGGATCCGTGACCATAACGTCCGGCTCACACCTTCCGATCGTCGATCAGGTTCAGGCGGCAAGGGCTG CGCTGACATTTCCGGCCAATGTCGACATTGAAGTCATACAGTCAGGCGGGTCATTCGGACGGCGGGGACTTATGTCCTCA GACTATGTTGTTGAATGCGTGCGCATTGCCAAGCGCGCAAAGGCCCGTCCCGTCAAACTCATATGGTCGCGCGAGGACGA GATGGCATCGGGCTATTATCGCCCGATGGTCCATCACCGGGCCTGGGTTGAGATCGCCCCGGACGGATATCCGGCGAAGT GGCGCCACCATGTTGTCTCCCAGGCGCTGGTCCCGGTGGGTGAAAATCATCAGTCCTTCGAGGGGATTGCGCACTCACCC TATTTTTCAACCGCGTCCGTCATCGACGGCAAGGTCTTCTCCCCCCGGTTTCCGGTTCCGGTGTCCTTCTGGCGTTCGGT CGGTCATTCCCACACCGGCATGGCGATGGAACATATCGTAGATCAGCTCGCGCAACGCGCCGGCCGGGATCCCGCCGACT ATCGGCGTTATCTGTATCAGCAGGCAAACGCAGAACGGCATCTCGCGGTCCTGGACATGCTGATCCGCCAGGGCGACTGG GGCCAGCCGATCGACGCCGGATGGGCCAGAGGGATTGCCATCCACGAGGCGTTCGGAACCGTGGTTGGTCAGATCGTGGA AGTTCAGATCGCCGAAGGCCGGCCACGGGTGCGCCGCGTAGTTGCCGTCGTCGATTGCGGGATAGCCATTTCCCCCAATC AGATCGCCGCCCAGATGGAAGGCGGGATTGCATTTGGCCTGTCGGCTGCCCTCTATGGCGCGGTCACACTTAAGGACGGG TATGTTCAGGAGTTAAACTTCGATGCCTATCCGGTGGTTCGGATGAACGATATGCCGGCCGTCGAAACGCATATTATTCC GTCGACGAACCGTCCAACAGGCATGGGGGAACCCGGCGTTCCGCCGATCGCTCCCGCGGTTGCCAACGCCATTCTTGCAC TGACAGGAAAACCGACACGGAGCCTGCCATTTCCGGCTCGCGACAGCTAA
Upstream 100 bases:
>100_bases TCGAAGCCTGGATCGCCACAGGCGCTCTCTGTCCGGAATGATCCGGCCTGCCAACAAAGGACAGCTCGTGACCGATACTC CCGCTAAGAAACGGTTCCTT
Downstream 100 bases:
>100_bases GCAGACGCCCGAGACGGCGATGATTGGGCGTCTGACAGGGGCGTTTCAGCGAACGCCGAAATGCTCCGCCAATACAAACC CGGGAAGAACCCGGCTGACC
Product: putative isoquinoline 1-oxidoreductase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 709; Mature: 708
Protein sequence:
>709_residues MTRRRMILGGSLVGGALIVGYGVTHPMQIAGAVLGGDPNPEDSAFGPFIRMAPDGWVTVVNKQQEMGQGIHAGLAAMVAE ELDADWDRVRVIDADSNFRAYGAQGTAGSRSVASNWDAMRNAGAAARAMFVSAAARLWTTPQNFIQVRDGIVSDAQSGRS APFAELLAAAAAETPPRTPILKQPDAYRLIGTDRVRRKDCGPKTTGAHIYTQDIQHPDLLVAMVAHSPRFGGTLARFDAS DALQVKGVVDVFAIETGVAVLAENTVSARRGRDALRIEWDDEEAETRSTPDLVREYHEIGSGRTSLRPDILEARGDTAAE FGTDAIEFMIDFPFLAHAPMETMDCVARVDGGSVTITSGSHLPIVDQVQAARAALTFPANVDIEVIQSGGSFGRRGLMSS DYVVECVRIAKRAKARPVKLIWSREDEMASGYYRPMVHHRAWVEIAPDGYPAKWRHHVVSQALVPVGENHQSFEGIAHSP YFSTASVIDGKVFSPRFPVPVSFWRSVGHSHTGMAMEHIVDQLAQRAGRDPADYRRYLYQQANAERHLAVLDMLIRQGDW GQPIDAGWARGIAIHEAFGTVVGQIVEVQIAEGRPRVRRVVAVVDCGIAISPNQIAAQMEGGIAFGLSAALYGAVTLKDG YVQELNFDAYPVVRMNDMPAVETHIIPSTNRPTGMGEPGVPPIAPAVANAILALTGKPTRSLPFPARDS
Sequences:
>Translated_709_residues MTRRRMILGGSLVGGALIVGYGVTHPMQIAGAVLGGDPNPEDSAFGPFIRMAPDGWVTVVNKQQEMGQGIHAGLAAMVAE ELDADWDRVRVIDADSNFRAYGAQGTAGSRSVASNWDAMRNAGAAARAMFVSAAARLWTTPQNFIQVRDGIVSDAQSGRS APFAELLAAAAAETPPRTPILKQPDAYRLIGTDRVRRKDCGPKTTGAHIYTQDIQHPDLLVAMVAHSPRFGGTLARFDAS DALQVKGVVDVFAIETGVAVLAENTVSARRGRDALRIEWDDEEAETRSTPDLVREYHEIGSGRTSLRPDILEARGDTAAE FGTDAIEFMIDFPFLAHAPMETMDCVARVDGGSVTITSGSHLPIVDQVQAARAALTFPANVDIEVIQSGGSFGRRGLMSS DYVVECVRIAKRAKARPVKLIWSREDEMASGYYRPMVHHRAWVEIAPDGYPAKWRHHVVSQALVPVGENHQSFEGIAHSP YFSTASVIDGKVFSPRFPVPVSFWRSVGHSHTGMAMEHIVDQLAQRAGRDPADYRRYLYQQANAERHLAVLDMLIRQGDW GQPIDAGWARGIAIHEAFGTVVGQIVEVQIAEGRPRVRRVVAVVDCGIAISPNQIAAQMEGGIAFGLSAALYGAVTLKDG YVQELNFDAYPVVRMNDMPAVETHIIPSTNRPTGMGEPGVPPIAPAVANAILALTGKPTRSLPFPARDS >Mature_708_residues TRRRMILGGSLVGGALIVGYGVTHPMQIAGAVLGGDPNPEDSAFGPFIRMAPDGWVTVVNKQQEMGQGIHAGLAAMVAEE LDADWDRVRVIDADSNFRAYGAQGTAGSRSVASNWDAMRNAGAAARAMFVSAAARLWTTPQNFIQVRDGIVSDAQSGRSA PFAELLAAAAAETPPRTPILKQPDAYRLIGTDRVRRKDCGPKTTGAHIYTQDIQHPDLLVAMVAHSPRFGGTLARFDASD ALQVKGVVDVFAIETGVAVLAENTVSARRGRDALRIEWDDEEAETRSTPDLVREYHEIGSGRTSLRPDILEARGDTAAEF GTDAIEFMIDFPFLAHAPMETMDCVARVDGGSVTITSGSHLPIVDQVQAARAALTFPANVDIEVIQSGGSFGRRGLMSSD YVVECVRIAKRAKARPVKLIWSREDEMASGYYRPMVHHRAWVEIAPDGYPAKWRHHVVSQALVPVGENHQSFEGIAHSPY FSTASVIDGKVFSPRFPVPVSFWRSVGHSHTGMAMEHIVDQLAQRAGRDPADYRRYLYQQANAERHLAVLDMLIRQGDWG QPIDAGWARGIAIHEAFGTVVGQIVEVQIAEGRPRVRRVVAVVDCGIAISPNQIAAQMEGGIAFGLSAALYGAVTLKDGY VQELNFDAYPVVRMNDMPAVETHIIPSTNRPTGMGEPGVPPIAPAVANAILALTGKPTRSLPFPARDS
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 76582; Mature: 76450
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRRMILGGSLVGGALIVGYGVTHPMQIAGAVLGGDPNPEDSAFGPFIRMAPDGWVTVV CCCCEEEECCCHHCCEEEEECCCCCHHHHHHHEECCCCCCCCCCCCCEEEECCCCEEEEE NKQQEMGQGIHAGLAAMVAEELDADWDRVRVIDADSNFRAYGAQGTAGSRSVASNWDAMR CCHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCHHHHCHHHHH NAGAAARAMFVSAAARLWTTPQNFIQVRDGIVSDAQSGRSAPFAELLAAAAAETPPRTPI CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC LKQPDAYRLIGTDRVRRKDCGPKTTGAHIYTQDIQHPDLLVAMVAHSPRFGGTLARFDAS CCCCCCEEEECCCHHHHHCCCCCCCCCEEEECCCCCCHHEEHHHHCCCCCCCEEEECCCC DALQVKGVVDVFAIETGVAVLAENTVSARRGRDALRIEWDDEEAETRSTPDLVREYHEIG CCEEECCCEEEEEHHCCCEEEECCCHHHHCCCCEEEEEECCCHHHCCCCHHHHHHHHHHC SGRTSLRPDILEARGDTAAEFGTDAIEFMIDFPFLAHAPMETMDCVARVDGGSVTITSGS CCCCCCCCHHHHCCCCCHHHHCCHHHHHHCCCCHHHCCCHHHHHHHHCCCCCEEEEECCC HLPIVDQVQAARAALTFPANVDIEVIQSGGSFGRRGLMSSDYVVECVRIAKRAKARPVKL CCCHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE IWSREDEMASGYYRPMVHHRAWVEIAPDGYPAKWRHHVVSQALVPVGENHQSFEGIAHSP EECCCHHHHCCHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCC YFSTASVIDGKVFSPRFPVPVSFWRSVGHSHTGMAMEHIVDQLAQRAGRDPADYRRYLYQ CCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH QANAERHLAVLDMLIRQGDWGQPIDAGWARGIAIHEAFGTVVGQIVEVQIAEGRPRVRRV HCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHEEEEEECCCCHHHHHH VAVVDCGIAISPNQIAAQMEGGIAFGLSAALYGAVTLKDGYVQELNFDAYPVVRMNDMPA HHHEECCCEECCHHHHHHHCCCCHHHHHHHHHEEEEECCCCHHHCCCCCCEEEEECCCCC VETHIIPSTNRPTGMGEPGVPPIAPAVANAILALTGKPTRSLPFPARDS CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCC >Mature Secondary Structure TRRRMILGGSLVGGALIVGYGVTHPMQIAGAVLGGDPNPEDSAFGPFIRMAPDGWVTVV CCCEEEECCCHHCCEEEEECCCCCHHHHHHHEECCCCCCCCCCCCCEEEECCCCEEEEE NKQQEMGQGIHAGLAAMVAEELDADWDRVRVIDADSNFRAYGAQGTAGSRSVASNWDAMR CCHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCHHHHCHHHHH NAGAAARAMFVSAAARLWTTPQNFIQVRDGIVSDAQSGRSAPFAELLAAAAAETPPRTPI CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC LKQPDAYRLIGTDRVRRKDCGPKTTGAHIYTQDIQHPDLLVAMVAHSPRFGGTLARFDAS CCCCCCEEEECCCHHHHHCCCCCCCCCEEEECCCCCCHHEEHHHHCCCCCCCEEEECCCC DALQVKGVVDVFAIETGVAVLAENTVSARRGRDALRIEWDDEEAETRSTPDLVREYHEIG CCEEECCCEEEEEHHCCCEEEECCCHHHHCCCCEEEEEECCCHHHCCCCHHHHHHHHHHC SGRTSLRPDILEARGDTAAEFGTDAIEFMIDFPFLAHAPMETMDCVARVDGGSVTITSGS CCCCCCCCHHHHCCCCCHHHHCCHHHHHHCCCCHHHCCCHHHHHHHHCCCCCEEEEECCC HLPIVDQVQAARAALTFPANVDIEVIQSGGSFGRRGLMSSDYVVECVRIAKRAKARPVKL CCCHHHHHHHHHHEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE IWSREDEMASGYYRPMVHHRAWVEIAPDGYPAKWRHHVVSQALVPVGENHQSFEGIAHSP EECCCHHHHCCHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCC YFSTASVIDGKVFSPRFPVPVSFWRSVGHSHTGMAMEHIVDQLAQRAGRDPADYRRYLYQ CCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH QANAERHLAVLDMLIRQGDWGQPIDAGWARGIAIHEAFGTVVGQIVEVQIAEGRPRVRRV HCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHEEEEEECCCCHHHHHH VAVVDCGIAISPNQIAAQMEGGIAFGLSAALYGAVTLKDGYVQELNFDAYPVVRMNDMPA HHHEECCCEECCHHHHHHHCCCCHHHHHHHHHEEEEECCCCHHHCCCCCCEEEEECCCCC VETHIIPSTNRPTGMGEPGVPPIAPAVANAILALTGKPTRSLPFPARDS CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]