Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797333
Identifier: 114797333
GI number: 114797333
Start: 650868
End: 652100
Strand: Direct
Name: 114797333
Synonym: HNE_0647
Alternate gene names: NA
Gene position: 650868-652100 (Clockwise)
Preceding gene: 114798318
Following gene: 114797419
Centisome position: 17.57
GC content: 60.75
Gene sequence:
>1233_bases ATGCGACATGTCCTGAAGTCCGCCCTGTGTGCCGCCGCGGTGTTCGCGGGCGCCGCCCTTCCGGCGGTTGCCGACGACGC GACCTGCGAGACGGAAAAGCTGCGCGGCGCGCTTGAGGCTGTTCAGTCGGTCATAAAGGATGGCACGACCCTGTCGGTCT ACGTTCCGCAGATGGACAGCTACGTAAAGGATTGCCCCAATCAGGCCTGGATCAATGTTCTGGGCGGCGAGCTTGATCTG ATGGTCTTCAGGGGCTTGCGCAACGCCAATGGCGGGGTGCCAACCCAGGACGCCGTCAATTATCTCCTCCGCGCCTTTCT CCGCTCGGACGTGTTTTATGCGGGTCCGGACGAGACGCGCAACGGCCGCTACGACGTCGCCACCAGCCACAGCTTCTACA ACAGGCTTGAATACAGTGTTGCCTCCAACAGCCGCCGCGCGATCATTGACGAGCTGGCGACGCTGGCACTGGCGGGCACC GTCCACCCCTACCTTTCCGGCAAGGCGCCGCTGGAATGCAAAGGGTGGCTGACCAGCGACGCGCAGAACATCTCCTATGA TATTGATGAAGCGGCCGACAAGGTGCTGCTGCCTTTTGTGGAGGCCGCCGCCGAGGCCTGCCGGAGCGCGGCAACGCGTT CAGACAAGTTACCGCTCTCTCTGCTGGCCAAGACCTATATCCGCCTGGTTGACAAAGGCGTGGTGAGTGATCCGGGCGAA GTCGAAAGCATGCTGCTGGCGGCTGAAAAAGACGCCAGGGAGTATCTTGGTAAGGATGAATTTCACACGTTCTATTTTGA TGAGAGCGACGTCAACAAGCTGAAGAGCCTTCTACGAAAATATGGCGTCCATACCGGTCCCGGCGAGGCGGTGATTGATC GCGCCTTGTGGTTCACCGCGGAATATATCGGCAGCGAAGCGGCCATACGCTCCATCGTCTATTCGCTGGACGATTACTGG ACGCCGCTCGCCGCGGGCGACACCGATGCGTCTAAAGAAGACGTCGCCAAAGCCCGCAACCGTATGACGGCATACGTGCT TGAGCTGAACAAGGAAGGCGCCGCCGCCGGCTTCAAGGATGAGACCAGCGCCATGCTGCGTGAGGCCGTCACCGCTTTTC ACAAGCGTGAGATCGTCTCCCCGAAGATGGAGGGCCGCACGGACATGCCCTCCTGGCTCTATGACATCGTGATCCGGATA CTGACGCCGGTGCCGACTGCCGCGCCACAGTAA
Upstream 100 bases:
>100_bases GTGGTCTCGGAAATAAAATAGCCCCTGTCTGACCTGATCGGGGGGTAGCGGCGGGCGCAAAAAGCCAGCAATGCTGCGTC CCGGTTCCGGAGAGTTTCTG
Downstream 100 bases:
>100_bases TCAGCAGGCAAACCAAAAGCCCGGCATCATCCTGAGATGAGCCGGGCTTTCGTCACTTCCGGGAGGAGGTGAGTTACCAG TTACGCGAGTCGTTGGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MRHVLKSALCAAAVFAGAALPAVADDATCETEKLRGALEAVQSVIKDGTTLSVYVPQMDSYVKDCPNQAWINVLGGELDL MVFRGLRNANGGVPTQDAVNYLLRAFLRSDVFYAGPDETRNGRYDVATSHSFYNRLEYSVASNSRRAIIDELATLALAGT VHPYLSGKAPLECKGWLTSDAQNISYDIDEAADKVLLPFVEAAAEACRSAATRSDKLPLSLLAKTYIRLVDKGVVSDPGE VESMLLAAEKDAREYLGKDEFHTFYFDESDVNKLKSLLRKYGVHTGPGEAVIDRALWFTAEYIGSEAAIRSIVYSLDDYW TPLAAGDTDASKEDVAKARNRMTAYVLELNKEGAAAGFKDETSAMLREAVTAFHKREIVSPKMEGRTDMPSWLYDIVIRI LTPVPTAAPQ
Sequences:
>Translated_410_residues MRHVLKSALCAAAVFAGAALPAVADDATCETEKLRGALEAVQSVIKDGTTLSVYVPQMDSYVKDCPNQAWINVLGGELDL MVFRGLRNANGGVPTQDAVNYLLRAFLRSDVFYAGPDETRNGRYDVATSHSFYNRLEYSVASNSRRAIIDELATLALAGT VHPYLSGKAPLECKGWLTSDAQNISYDIDEAADKVLLPFVEAAAEACRSAATRSDKLPLSLLAKTYIRLVDKGVVSDPGE VESMLLAAEKDAREYLGKDEFHTFYFDESDVNKLKSLLRKYGVHTGPGEAVIDRALWFTAEYIGSEAAIRSIVYSLDDYW TPLAAGDTDASKEDVAKARNRMTAYVLELNKEGAAAGFKDETSAMLREAVTAFHKREIVSPKMEGRTDMPSWLYDIVIRI LTPVPTAAPQ >Mature_410_residues MRHVLKSALCAAAVFAGAALPAVADDATCETEKLRGALEAVQSVIKDGTTLSVYVPQMDSYVKDCPNQAWINVLGGELDL MVFRGLRNANGGVPTQDAVNYLLRAFLRSDVFYAGPDETRNGRYDVATSHSFYNRLEYSVASNSRRAIIDELATLALAGT VHPYLSGKAPLECKGWLTSDAQNISYDIDEAADKVLLPFVEAAAEACRSAATRSDKLPLSLLAKTYIRLVDKGVVSDPGE VESMLLAAEKDAREYLGKDEFHTFYFDESDVNKLKSLLRKYGVHTGPGEAVIDRALWFTAEYIGSEAAIRSIVYSLDDYW TPLAAGDTDASKEDVAKARNRMTAYVLELNKEGAAAGFKDETSAMLREAVTAFHKREIVSPKMEGRTDMPSWLYDIVIRI LTPVPTAAPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44859; Mature: 44859
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVLKSALCAAAVFAGAALPAVADDATCETEKLRGALEAVQSVIKDGTTLSVYVPQMDS CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH YVKDCPNQAWINVLGGELDLMVFRGLRNANGGVPTQDAVNYLLRAFLRSDVFYAGPDETR HHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC NGRYDVATSHSFYNRLEYSVASNSRRAIIDELATLALAGTVHPYLSGKAPLECKGWLTSD CCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AQNISYDIDEAADKVLLPFVEAAAEACRSAATRSDKLPLSLLAKTYIRLVDKGVVSDPGE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHH VESMLLAAEKDAREYLGKDEFHTFYFDESDVNKLKSLLRKYGVHTGPGEAVIDRALWFTA HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH EYIGSEAAIRSIVYSLDDYWTPLAAGDTDASKEDVAKARNRMTAYVLELNKEGAAAGFKD HHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCH ETSAMLREAVTAFHKREIVSPKMEGRTDMPSWLYDIVIRILTPVPTAAPQ HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRHVLKSALCAAAVFAGAALPAVADDATCETEKLRGALEAVQSVIKDGTTLSVYVPQMDS CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH YVKDCPNQAWINVLGGELDLMVFRGLRNANGGVPTQDAVNYLLRAFLRSDVFYAGPDETR HHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCC NGRYDVATSHSFYNRLEYSVASNSRRAIIDELATLALAGTVHPYLSGKAPLECKGWLTSD CCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC AQNISYDIDEAADKVLLPFVEAAAEACRSAATRSDKLPLSLLAKTYIRLVDKGVVSDPGE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHH VESMLLAAEKDAREYLGKDEFHTFYFDESDVNKLKSLLRKYGVHTGPGEAVIDRALWFTA HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH EYIGSEAAIRSIVYSLDDYWTPLAAGDTDASKEDVAKARNRMTAYVLELNKEGAAAGFKD HHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCH ETSAMLREAVTAFHKREIVSPKMEGRTDMPSWLYDIVIRILTPVPTAAPQ HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA