| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797208
Identifier: 114797208
GI number: 114797208
Start: 3114397
End: 3115737
Strand: Reverse
Name: 114797208
Synonym: HNE_2958
Alternate gene names: NA
Gene position: 3115737-3114397 (Counterclockwise)
Preceding gene: 114799928
Following gene: 114797792
Centisome position: 84.09
GC content: 62.57
Gene sequence:
>1341_bases ATGGGCCGTTTGAAAACACTGGCAGGGGTGGTTGTGGTGGCGGGCCTGATGGCGGCCTGTCAGTCGGCGCAGGACGAACT GCCGCCGCCCGCATCGCTCACCGCGCCGCAAATCGCTGAAAACGCCGCGACGCCGGAAACCGAAGCGCCGCTCGTCCTGA TGATCGGGCTCGATGGCCTCAACCCGTCCATGATTGACCGCTGGGAGGCGCCAAACCTCAAGGCACTTGCTGCGCGCGGC GTGCGTGCCGAAGCGATGTATCCGGTGATGCCAAGCGTTACCTTCGTGAACTTCTACTCGCTCGCAACCGGGCTTTATCC CGAGCATCACGGGATGGTGGAGAATTACCCGTATGACAAAGCGACCGATCAACAGTTTGACCGGGCAACCGGGCCGACCG AAGAACACTGGTGGCAGGGCGAGCCGATCTGGGTAACCGCCGAGAAGCAGGGCCTGCCGACGTCCATCATGTTCTGGCTT GGCTCAGAGGTGCCCCATGATGGCGTGCGGCCTACGCGCTGGACCCCCTATGAACACAACAAGCCCTATCAGGACCGGGT GGATGAAGTGATGGCCTGGTACGACGCCCCGGAAGCCGAACTGCCCCGCTTTGCGGCGGTGTATTTCGACCGGGTGGATA CTGCTGCCCACTATTTCGGACCGGGCTCGGACAAGGCCAAGGAAGCGCTTGCGGAAGTGGACGGGTATGTCGGCCAGCTG GCTCAAGGCCTGAAAGACCGCGGCCTGCTCGAGCGCACGACGATCCTTGTCGTATCAGATCATGGCATGGTCTGGGTTGA TCCGGAGAAGGTGATGGACATCGGCCAGTTCCTTGATCTGGACGCGCTGACCGTGCCGCAATTCAACGGCCCCTATGGCG GCTCCAACCATCCGTTCCTGCACATCTATGGCGCGGGCGACGCGCTTGAGACTGCCTATGAAGGCCTCAAGGATTTTGAC GAGCACATCCATGTCTACAAGCGCGGGGAAATGCCCGATCACTATCATTTCGACCACCCCACACGCGGGCCGGATCTCTT CCTCGTGGCTGATCCGGGCTGGTCGGTGCGCAACGCCAATGTCGGCGGCTGGCGCGCGCCAATCCCCGGCCAGCACGGCT ATGACAACCTGGACCCCAGCATGGCTGCGACCTTTATCGGCGCTGGCCCGATCTTTCCCGAAGGCGAAACAGCTGCGCCC TTCGAGAATGTGAACGTCTATCTGATGATTGCCTGCGCGCTCGGAATTGAGCCGGCGCAGACTGACGGCAATCCAGGCGT GGTGGAGATGGTGACCGGCGGACGCTGCCCGGCGGCCCGTGTTCAGGCCGCTCGGGAATAG
Upstream 100 bases:
>100_bases ACGCCTCGCGTCACGCCTTTTTCACCCCATGGGCTTCACATCGCCGCTACATTCGGGGTCTAAGGCGGAAGGAATTTCAC CATGTGTAAGGGAGCCGGGT
Downstream 100 bases:
>100_bases GGCATCCAGCTGGCCGGCGGGGCGTTACTGTCCCAGCCGGTCGGTTTCCTCGCCGATAATATCCATGAGTTCGGGATGTT CAGCCTGGAGCGTGGTGAGG
Product: type I phosphodiesterase/nucleotide pyrophosphatase family protein
Products: NA
Alternate protein names: Nucleotide Diphosphatase; Type I Phosphodiesterase/Nucleotide Pyrophosphatase Protein; Type I Phosphodiesterase/Nucleotide Pyrophosphatase; Phosphodiesterase-Nucleotide Pyrophosphatase; RB13-6 Antigen; Phosphodiesterase-Nucleotide Pyrophosphatase-Like Protein; Sulfatase; Nucleotide Pyrophosphatase Family Protein
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MGRLKTLAGVVVVAGLMAACQSAQDELPPPASLTAPQIAENAATPETEAPLVLMIGLDGLNPSMIDRWEAPNLKALAARG VRAEAMYPVMPSVTFVNFYSLATGLYPEHHGMVENYPYDKATDQQFDRATGPTEEHWWQGEPIWVTAEKQGLPTSIMFWL GSEVPHDGVRPTRWTPYEHNKPYQDRVDEVMAWYDAPEAELPRFAAVYFDRVDTAAHYFGPGSDKAKEALAEVDGYVGQL AQGLKDRGLLERTTILVVSDHGMVWVDPEKVMDIGQFLDLDALTVPQFNGPYGGSNHPFLHIYGAGDALETAYEGLKDFD EHIHVYKRGEMPDHYHFDHPTRGPDLFLVADPGWSVRNANVGGWRAPIPGQHGYDNLDPSMAATFIGAGPIFPEGETAAP FENVNVYLMIACALGIEPAQTDGNPGVVEMVTGGRCPAARVQAARE
Sequences:
>Translated_446_residues MGRLKTLAGVVVVAGLMAACQSAQDELPPPASLTAPQIAENAATPETEAPLVLMIGLDGLNPSMIDRWEAPNLKALAARG VRAEAMYPVMPSVTFVNFYSLATGLYPEHHGMVENYPYDKATDQQFDRATGPTEEHWWQGEPIWVTAEKQGLPTSIMFWL GSEVPHDGVRPTRWTPYEHNKPYQDRVDEVMAWYDAPEAELPRFAAVYFDRVDTAAHYFGPGSDKAKEALAEVDGYVGQL AQGLKDRGLLERTTILVVSDHGMVWVDPEKVMDIGQFLDLDALTVPQFNGPYGGSNHPFLHIYGAGDALETAYEGLKDFD EHIHVYKRGEMPDHYHFDHPTRGPDLFLVADPGWSVRNANVGGWRAPIPGQHGYDNLDPSMAATFIGAGPIFPEGETAAP FENVNVYLMIACALGIEPAQTDGNPGVVEMVTGGRCPAARVQAARE >Mature_445_residues GRLKTLAGVVVVAGLMAACQSAQDELPPPASLTAPQIAENAATPETEAPLVLMIGLDGLNPSMIDRWEAPNLKALAARGV RAEAMYPVMPSVTFVNFYSLATGLYPEHHGMVENYPYDKATDQQFDRATGPTEEHWWQGEPIWVTAEKQGLPTSIMFWLG SEVPHDGVRPTRWTPYEHNKPYQDRVDEVMAWYDAPEAELPRFAAVYFDRVDTAAHYFGPGSDKAKEALAEVDGYVGQLA QGLKDRGLLERTTILVVSDHGMVWVDPEKVMDIGQFLDLDALTVPQFNGPYGGSNHPFLHIYGAGDALETAYEGLKDFDE HIHVYKRGEMPDHYHFDHPTRGPDLFLVADPGWSVRNANVGGWRAPIPGQHGYDNLDPSMAATFIGAGPIFPEGETAAPF ENVNVYLMIACALGIEPAQTDGNPGVVEMVTGGRCPAARVQAARE
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI111160296, Length=404, Percent_Identity=31.9306930693069, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI170650661, Length=432, Percent_Identity=31.25, Blast_Score=212, Evalue=5e-55, Organism=Homo sapiens, GI91823602, Length=387, Percent_Identity=30.4909560723514, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI195947389, Length=389, Percent_Identity=30.3341902313625, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI23503267, Length=420, Percent_Identity=29.7619047619048, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI45545421, Length=386, Percent_Identity=30.8290155440415, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI7662358, Length=379, Percent_Identity=28.2321899736148, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI91823274, Length=441, Percent_Identity=27.6643990929705, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI11034849, Length=388, Percent_Identity=25.2577319587629, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI310110107, Length=397, Percent_Identity=23.4256926952141, Blast_Score=129, Evalue=5e-30, Organism=Caenorhabditis elegans, GI212646262, Length=387, Percent_Identity=29.1989664082687, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI115533126, Length=387, Percent_Identity=29.1989664082687, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI115533128, Length=387, Percent_Identity=29.1989664082687, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI115533130, Length=436, Percent_Identity=25.2293577981651, Blast_Score=157, Evalue=7e-39, Organism=Caenorhabditis elegans, GI115533132, Length=433, Percent_Identity=25.8660508083141, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17569567, Length=379, Percent_Identity=26.6490765171504, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71981768, Length=417, Percent_Identity=23.9808153477218, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71986535, Length=431, Percent_Identity=22.2737819025522, Blast_Score=97, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6319874, Length=457, Percent_Identity=26.2582056892779, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320821, Length=460, Percent_Identity=26.5217391304348, Blast_Score=126, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48826; Mature: 48695
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLKTLAGVVVVAGLMAACQSAQDELPPPASLTAPQIAENAATPETEAPLVLMIGLDGL CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCC NPSMIDRWEAPNLKALAARGVRAEAMYPVMPSVTFVNFYSLATGLYPEHHGMVENYPYDK CHHHHHCCCCCCHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC ATDQQFDRATGPTEEHWWQGEPIWVTAEKQGLPTSIMFWLGSEVPHDGVRPTRWTPYEHN CCHHHHHHCCCCCHHHCCCCCCEEEEECCCCCCCEEHEEECCCCCCCCCCCCCCCCCCCC KPYQDRVDEVMAWYDAPEAELPRFAAVYFDRVDTAAHYFGPGSDKAKEALAEVDGYVGQL CCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH AQGLKDRGLLERTTILVVSDHGMVWVDPEKVMDIGQFLDLDALTVPQFNGPYGGSNHPFL HHHHHHCCCEEEEEEEEEECCCEEEECHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEE HIYGAGDALETAYEGLKDFDEHIHVYKRGEMPDHYHFDHPTRGPDLFLVADPGWSVRNAN EEEECCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEECCC VGGWRAPIPGQHGYDNLDPSMAATFIGAGPIFPEGETAAPFENVNVYLMIACALGIEPAQ CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCC TDGNPGVVEMVTGGRCPAARVQAARE CCCCCCEEEEECCCCCCHHHHHHCCC >Mature Secondary Structure GRLKTLAGVVVVAGLMAACQSAQDELPPPASLTAPQIAENAATPETEAPLVLMIGLDGL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCC NPSMIDRWEAPNLKALAARGVRAEAMYPVMPSVTFVNFYSLATGLYPEHHGMVENYPYDK CHHHHHCCCCCCHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC ATDQQFDRATGPTEEHWWQGEPIWVTAEKQGLPTSIMFWLGSEVPHDGVRPTRWTPYEHN CCHHHHHHCCCCCHHHCCCCCCEEEEECCCCCCCEEHEEECCCCCCCCCCCCCCCCCCCC KPYQDRVDEVMAWYDAPEAELPRFAAVYFDRVDTAAHYFGPGSDKAKEALAEVDGYVGQL CCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH AQGLKDRGLLERTTILVVSDHGMVWVDPEKVMDIGQFLDLDALTVPQFNGPYGGSNHPFL HHHHHHCCCEEEEEEEEEECCCEEEECHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEE HIYGAGDALETAYEGLKDFDEHIHVYKRGEMPDHYHFDHPTRGPDLFLVADPGWSVRNAN EEEECCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEECCC VGGWRAPIPGQHGYDNLDPSMAATFIGAGPIFPEGETAAPFENVNVYLMIACALGIEPAQ CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCC TDGNPGVVEMVTGGRCPAARVQAARE CCCCCCEEEEECCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA